FFCP PHASE1:Hg19::chr19:3708338..3708374,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:3708338..3708374,+
|short_description=p2@TJP3
|description=CAGE_peak_2_at_TJP3_5end
|association_with_transcript=-7bp_to_ENST00000541714,uc010xhs.1,uc010x...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=27134 | |EntrezGene=27134 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11829 | |HGNC=11829 | ||
|TSSclassifier=strong | |||
|UniProt=F5H2X0 | |UniProt=F5H2X0 | ||
|association_with_transcript=-7bp_to_ENST00000541714,uc010xhs.1,uc010xht.1_5end | |||
|cluster_id=chr19:3708338..3708374,+ | |||
|coexpression_cluster_id=C3780 | |||
|description=CAGE_peak_2_at_TJP3_5end | |||
|id=chr19:3708338..3708374,+ | |||
|ontology_enrichment_celltype=CL:0000223!2.26e-14!59;CL:0000066!2.99e-10!254;CL:0002076!3.17e-08!43 | |||
|ontology_enrichment_celltype_v019=CL:0000182;1.09e-08;12 | |||
|ontology_enrichment_celltype_v019_2=CL:0000223,3.85e-09,58;CL:0000182,9.49e-09,12 | |||
|ontology_enrichment_development_v019=UBERON:0006595;2.63e-12;86!UBERON:0001041;2.39e-10;30!UBERON:0009497;3.08e-08;13!UBERON:0008947;2.57e-07;29!UBERON:0004161;2.61e-07;11 | |||
|ontology_enrichment_disease=DOID:305!1.69e-30!106;DOID:0050687!1.04e-19!143;DOID:299!3.80e-10!25;DOID:162!7.82e-08!235;DOID:14566!2.52e-07!239;DOID:7!7.34e-07!39 | |||
|ontology_enrichment_disease_v019=DOID:299;8.67e-13;25!DOID:5093;5.24e-10;4!DOID:1612;5.24e-10;4!DOID:305;7.76e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:305,1.39e-16,106;DOID:299,7.63e-13,25;DOID:5093,5.51e-10,4;DOID:1612,5.51e-10,4;DOID:0050687,5.77e-10,143 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.39e-38!129;UBERON:0004185!1.39e-38!129;UBERON:0001007!6.10e-36!155;UBERON:0001555!6.10e-36!155;UBERON:0007026!6.10e-36!155;UBERON:0004119!1.57e-34!169;UBERON:0000925!1.57e-34!169;UBERON:0006595!1.57e-34!169;UBERON:0000077!6.34e-32!130;UBERON:0001041!1.79e-27!98;UBERON:0001004!5.05e-17!72;UBERON:0000065!7.20e-16!53;UBERON:0000466!3.43e-14!126;UBERON:0008947!1.90e-13!38;UBERON:0003258!1.90e-13!38;UBERON:0007023!2.81e-13!115;UBERON:0003104!1.03e-12!238;UBERON:0009142!1.03e-12!238;UBERON:0000481!2.18e-12!347;UBERON:0005911!6.79e-12!82;UBERON:0000072!7.36e-12!46;UBERON:0005409!5.00e-11!35;UBERON:0001048!3.03e-10!168;UBERON:0000062!4.51e-10!511;UBERON:0005177!5.73e-10!107;UBERON:0002530!1.18e-09!59;UBERON:0000464!1.80e-09!104;UBERON:0001557!3.36e-09!19;UBERON:0003929!3.86e-09!54;UBERON:0009569!4.77e-09!113;UBERON:0000160!5.90e-09!27;UBERON:0009497!7.92e-09!25;UBERON:0000015!7.92e-09!25;UBERON:0002423!7.92e-09!25;UBERON:0006235!7.92e-09!25;UBERON:0004161!7.92e-09!25;UBERON:0000063!9.17e-09!97;UBERON:0001737!1.38e-08!9;UBERON:0005178!1.00e-07!34;UBERON:0002224!1.00e-07!34;UBERON:0005181!2.30e-07!35;UBERON:0009854!2.78e-07!23;UBERON:0000922!3.80e-07!612;UBERON:0009856!3.89e-07!26;UBERON:0000915!3.95e-07!52;UBERON:0000161!8.78e-07!35 | |||
|ontology_enrichment_uberon_v019=UBERON:0004921;6.96e-21;33!UBERON:0005409;5.16e-15;22!UBERON:0000160;2.89e-14;17!UBERON:0002423;5.33e-11;25!UBERON:0002365;4.06e-10;31!UBERON:0002330;4.06e-10;31!UBERON:0001007;5.16e-09;81!UBERON:0006947;2.55e-08;3!UBERON:0004054;2.55e-08;3!UBERON:0002108;3.58e-08;4!UBERON:0000058;5.31e-08;10!UBERON:0001041;9.63e-08;14!UBERON:0001555;1.18e-07;54!UBERON:0000059;1.27e-07;11!UBERON:0001044;3.96e-07;6!UBERON:0003293;3.96e-07;6!UBERON:0003294;3.96e-07;6!UBERON:0010047;3.96e-07;6!UBERON:0003408;3.96e-07;6!UBERON:0000167;3.96e-07;6!UBERON:0001155;8.93e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004921,3.68e-28,118;UBERON:0001007,6.23e-26,145;UBERON:0001555,6.23e-26,145;UBERON:0007026,6.23e-26,145;UBERON:0004119,2.96e-22,160;UBERON:0000925,2.96e-22,160;UBERON:0006595,2.96e-22,160;UBERON:0001041,5.88e-16,87;UBERON:0000160,2.04e-14,17;UBERON:0005409,4.87e-13,25;UBERON:0005911,3.95e-12,82;UBERON:0005177,2.46e-11,101;UBERON:0009497,4.48e-11,25;UBERON:0000015,4.48e-11,25;UBERON:0002423,4.48e-11,25;UBERON:0006235,4.48e-11,25;UBERON:0004161,4.48e-11,25;UBERON:0002530,8.74e-11,59;UBERON:0009569,1.35e-10,112;UBERON:0003929,1.36e-10,54;UBERON:0011216,1.84e-10,223;UBERON:0009856,2.13e-10,26;UBERON:0007023,2.21e-10,114;UBERON:0002365,3.23e-10,31;UBERON:0002330,3.23e-10,31;UBERON:0009854,3.28e-10,23;UBERON:0007499,5.10e-09,25;UBERON:0008835,8.82e-09,22;UBERON:0003894,8.82e-09,22;UBERON:0006947,2.47e-08,3;UBERON:0004054,2.47e-08,3;UBERON:0002108,2.97e-08,4;UBERON:0002100,7.18e-08,199;UBERON:0000059,1.11e-07,11;UBERON:0000915,1.75e-07,52;UBERON:0001044,4.32e-07,6;UBERON:0003293,4.32e-07,6;UBERON:0003294,4.32e-07,6;UBERON:0010047,4.32e-07,6;UBERON:0000167,4.32e-07,6;UBERON:0001155,7.66e-07,9 | |||
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| ||
|short_description=p2@TJP3 | |||
}} | }} |
Latest revision as of 16:51, 17 September 2015
Short description: | p2@TJP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_TJP3_5end |
Coexpression cluster: | C3780_submaxillary_salivary_small_parotid_duodenum_colon_gall |
Association with transcript: | -7bp_to_ENST00000541714, uc010xhs.1, uc010xht.1_5end |
EntrezGene: | TJP3 |
HGNC: | 11829 |
UniProt: | F5H2X0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endodermal cell | 3.85e-09 | 58 |
hepatocyte | 9.49e-09 | 12 |
Ontology term | p-value | n |
---|---|---|
carcinoma | 1.39e-16 | 106 |
adenocarcinoma | 7.63e-13 | 25 |
thoracic cancer | 5.51e-10 | 4 |
breast cancer | 5.51e-10 | 4 |
cell type cancer | 5.77e-10 | 143 |