FFCP PHASE1:Hg19::chr9:21994161..21994189,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_noncoding | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr9:21994161..21994189,+ | |||
|coexpression_cluster_id=C2573 | |coexpression_cluster_id=C2573 | ||
|description=CAGE_peak_at_chr9:21994161..21994189,+ | |description=CAGE_peak_at_chr9:21994161..21994189,+ | ||
|id=chr9:21994161..21994189,+ | |id=chr9:21994161..21994189,+ | ||
|ontology_enrichment_celltype=CL:0000738!9.46e-27!140;CL:0000988!5.54e-25!182;CL:0000037!1.30e-22!172;CL:0000566!1.30e-22!172;CL:0002031!3.85e-22!124;CL:0002032!6.92e-21!165;CL:0000837!6.92e-21!165;CL:0002087!1.47e-19!119;CL:0000838!7.91e-13!52;CL:0000542!2.05e-12!53;CL:0000051!2.05e-12!53;CL:0000860!1.13e-09!45;CL:0000763!1.32e-09!112;CL:0000049!1.32e-09!112;CL:0000557!1.60e-09!71;CL:0000766!5.69e-09!76;CL:0000839!1.00e-08!70;CL:0000080!2.91e-08!6;CL:0000453!3.78e-08!5;CL:0002057!4.55e-08!42;CL:0002009!6.39e-08!65;CL:0000003!1.68e-07!722;CL:0000063!3.19e-07!578;CL:0000084!3.97e-07!25;CL:0000827!3.97e-07!25;CL:0000451!5.53e-07!10;CL:0002320!6.02e-07!365;CL:0000990!7.59e-07!8;CL:0000134!8.74e-07!358 | |ontology_enrichment_celltype=CL:0000738!9.46e-27!140;CL:0000988!5.54e-25!182;CL:0000037!1.30e-22!172;CL:0000566!1.30e-22!172;CL:0002031!3.85e-22!124;CL:0002032!6.92e-21!165;CL:0000837!6.92e-21!165;CL:0002087!1.47e-19!119;CL:0000838!7.91e-13!52;CL:0000542!2.05e-12!53;CL:0000051!2.05e-12!53;CL:0000860!1.13e-09!45;CL:0000763!1.32e-09!112;CL:0000049!1.32e-09!112;CL:0000557!1.60e-09!71;CL:0000766!5.69e-09!76;CL:0000839!1.00e-08!70;CL:0000080!2.91e-08!6;CL:0000453!3.78e-08!5;CL:0002057!4.55e-08!42;CL:0002009!6.39e-08!65;CL:0000003!1.68e-07!722;CL:0000063!3.19e-07!578;CL:0000084!3.97e-07!25;CL:0000827!3.97e-07!25;CL:0000451!5.53e-07!10;CL:0002320!6.02e-07!365;CL:0000990!7.59e-07!8;CL:0000134!8.74e-07!358 | ||
|ontology_enrichment_celltype_v019=CL:0000453;1.41e-34;5!CL:0000990;3.53e-19;8!CL:0000451;1.14e-15;10!CL:0001014;1.47e-14;2!CL:0001016;1.47e-14;2!CL:0002393;1.51e-11;6!CL:0002397;1.51e-11;6!CL:0000860;5.97e-11;33!CL:0002057;5.97e-11;33!CL:0000576;2.20e-09;48!CL:0002581;5.06e-08;1!CL:0000473;7.89e-08;39!CL:0000234;7.89e-08;39!CL:0000766;8.93e-08;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000453,9.62e-35,5;CL:0000988,7.34e-20,177;CL:0000990,2.86e-19,8;CL:0000860,4.05e-18,42;CL:0002057,4.05e-18,42;CL:0000557,3.29e-17,67;CL:0000763,4.37e-17,108;CL:0000049,4.37e-17,108;CL:0002009,1.90e-16,61;CL:0000738,2.95e-16,136;CL:0000451,9.66e-16,10;CL:0000473,1.31e-15,48;CL:0000234,1.31e-15,48;CL:0002032,9.54e-15,161;CL:0000837,9.54e-15,161;CL:0001014,1.28e-14,2;CL:0001016,1.28e-14,2;CL:0000037,5.72e-14,168;CL:0002031,4.79e-13,120;CL:0000839,1.11e-12,66;CL:0002194,4.25e-12,59;CL:0000576,4.25e-12,59;CL:0000040,4.25e-12,59;CL:0000559,4.25e-12,59;CL:0000766,1.85e-11,72;CL:0002087,5.82e-09,115;CL:0002581,4.41e-08,1;CL:0002393,7.56e-08,9;CL:0002397,7.56e-08,9 | |||
|ontology_enrichment_development_v019=CL:0002057;1.94e-13;42 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0060060;5.06e-08;1!DOID:0060061;5.06e-08;1!DOID:8691;5.06e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:0060060,5.82e-08,1;DOID:0060061,5.82e-08,1;DOID:8691,5.82e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0002390!3.12e-10!102;UBERON:0003061!3.12e-10!102;UBERON:0002193!2.01e-09!112;UBERON:0002371!8.02e-09!80;UBERON:0001474!9.78e-09!86;UBERON:0004765!3.91e-07!101;UBERON:0001434!3.91e-07!101 | |ontology_enrichment_uberon=UBERON:0002390!3.12e-10!102;UBERON:0003061!3.12e-10!102;UBERON:0002193!2.01e-09!112;UBERON:0002371!8.02e-09!80;UBERON:0001474!9.78e-09!86;UBERON:0004765!3.91e-07!101;UBERON:0001434!3.91e-07!101 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;1.31e-11;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.74e-19,98;UBERON:0003061,2.74e-19,98;UBERON:0002193,3.40e-17,108;UBERON:0002371,6.95e-15,76;UBERON:0002405,1.23e-13,93;UBERON:0001474,1.29e-13,82;UBERON:0004765,3.49e-12,90;UBERON:0002331,1.46e-11,10;UBERON:0000358,1.46e-11,10;UBERON:0000307,1.46e-11,10;UBERON:0000091,1.46e-11,10;UBERON:0000087,1.46e-11,10;UBERON:0007010,1.46e-11,10;UBERON:0007806,1.46e-11,10;UBERON:0008780,1.46e-11,10;UBERON:0005728,1.46e-11,10;UBERON:0001434,1.03e-10,100;UBERON:0003081,1.36e-08,203 | |||
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|short_description=p@chr9:21994161..21994189,+ | |short_description=p@chr9:21994161..21994189,+ | ||
}} | }} |
Latest revision as of 01:10, 1 August 2015
Short description: | p@chr9:21994161..21994189, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:21994161..21994189, + |
Coexpression cluster: | C2573_cord_CD14_migratory_CD19_splenic_CD34_immature |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.74e-19 | 98 |
blood island | 2.74e-19 | 98 |
hemolymphoid system | 3.40e-17 | 108 |
bone marrow | 6.95e-15 | 76 |
immune system | 1.23e-13 | 93 |
bone element | 1.29e-13 | 82 |
skeletal element | 3.49e-12 | 90 |
umbilical cord | 1.46e-11 | 10 |
blastocyst | 1.46e-11 | 10 |
blastula | 1.46e-11 | 10 |
bilaminar disc | 1.46e-11 | 10 |
inner cell mass | 1.46e-11 | 10 |
cleaving embryo | 1.46e-11 | 10 |
connecting stalk | 1.46e-11 | 10 |
inner cell mass derived epiblast | 1.46e-11 | 10 |
extraembryonic mesoderm | 1.46e-11 | 10 |
skeletal system | 1.03e-10 | 100 |
lateral plate mesoderm | 1.36e-08 | 203 |
Ontology term | p-value | n |
---|---|---|
non-Hodgkin lymphoma | 5.82e-08 | 1 |
cutaneous T cell lymphoma | 5.82e-08 | 1 |
mycosis fungoides | 5.82e-08 | 1 |