FFCP PHASE1:Hg19::chr19:52146610..52146625,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr19:52146610..52146625,-
|short_description=p@chr19:52146610..52146625,-
|description=CAGE_peak_at_chr19:52146610..52146625,-
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:52146610..52146625,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr19:52146610..52146625,- | |||
|id=chr19:52146610..52146625,- | |||
|ontology_enrichment_celltype=CL:0000766!2.70e-78!76;CL:0000557!3.65e-72!71;CL:0002009!3.00e-71!65;CL:0002194!5.96e-71!63;CL:0000576!5.96e-71!63;CL:0000040!5.96e-71!63;CL:0000559!5.96e-71!63;CL:0000839!1.58e-70!70;CL:0002057!4.10e-70!42;CL:0000860!1.58e-64!45;CL:0000763!3.09e-59!112;CL:0000049!3.09e-59!112;CL:0000738!1.41e-48!140;CL:0000037!6.52e-43!172;CL:0000566!6.52e-43!172;CL:0002087!8.58e-43!119;CL:0002031!4.74e-42!124;CL:0002032!5.08e-41!165;CL:0000837!5.08e-41!165;CL:0000988!2.02e-39!182;CL:0002393!6.97e-13!9;CL:0002397!6.97e-13!9;CL:0000134!2.92e-12!358;CL:0002320!1.17e-11!365;CL:0000219!1.46e-09!390;CL:0000048!1.33e-07!430;CL:0000723!2.98e-07!436;CL:0000034!8.36e-07!444 | |||
|ontology_enrichment_celltype_v019=CL:0000860;4.67e-81;33!CL:0002057;4.67e-81;33!CL:0000473;1.80e-68;39!CL:0000234;1.80e-68;39!CL:0000576;4.01e-56;48!CL:0000766;4.59e-42;69!CL:0000763;1.09e-19;100!CL:0000738;4.72e-14;136!CL:0002087;1.63e-12;104!CL:0000235;1.21e-08;6!CL:0000775;1.54e-08;3!CL:0002393;2.99e-08;6!CL:0002397;2.99e-08;6!CL:0000988;6.97e-08;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-100,48;CL:0000234,1.12e-100,48;CL:0000860,9.91e-94,42;CL:0002057,9.91e-94,42;CL:0002194,1.31e-84,59;CL:0000576,1.31e-84,59;CL:0000040,1.31e-84,59;CL:0000559,1.31e-84,59;CL:0002009,1.11e-81,61;CL:0000766,2.96e-78,72;CL:0000839,4.01e-75,66;CL:0000557,6.30e-74,67;CL:0000763,1.61e-53,108;CL:0000049,1.61e-53,108;CL:0002087,1.46e-43,115;CL:0000738,2.95e-41,136;CL:0002031,8.56e-39,120;CL:0000037,2.46e-34,168;CL:0002032,7.16e-34,161;CL:0000837,7.16e-34,161;CL:0000988,2.90e-32,177;CL:0000134,7.38e-14,354;CL:0002320,1.87e-13,361;CL:0000219,4.89e-12,386;CL:0000048,2.68e-10,427;CL:0000723,4.66e-10,433;CL:0000034,9.51e-10,441;CL:0002393,2.74e-09,9;CL:0002397,2.74e-09,9;CL:0000235,1.25e-08,6;CL:0000775,1.54e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.28e-67;42!CL:0000049;1.18e-18;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.45e-62!80;UBERON:0002390!9.70e-62!102;UBERON:0003061!9.70e-62!102;UBERON:0002193!1.32e-58!112;UBERON:0001474!1.08e-56!86;UBERON:0002405!1.04e-50!115;UBERON:0004765!8.39e-46!101;UBERON:0001434!8.39e-46!101;UBERON:0002204!2.25e-23!167;UBERON:0003081!1.71e-20!216;UBERON:0002384!2.17e-11!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.47e-64,76;UBERON:0001474,1.93e-59,82;UBERON:0002390,1.34e-55,98;UBERON:0003061,1.34e-55,98;UBERON:0004765,1.16e-53,90;UBERON:0002405,9.46e-52,93;UBERON:0002193,6.57e-50,108;UBERON:0001434,9.97e-48,100;UBERON:0002204,3.73e-26,167;UBERON:0003081,1.26e-23,203;UBERON:0002384,6.60e-13,371;UBERON:0000926,6.99e-13,315;UBERON:0004120,6.99e-13,315;UBERON:0006603,6.99e-13,315 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.40381113229099,1.08505435357926,0.223915474239924,0.971680998056939,1.03030227053675,3.78035420826868,4.53451132426571,1.69808842831471,2.78914844286822,4.52284676824008,2.16794459626573,0.863077176966451,0.512321413058201,0.709446689665756,0.689491361473237,0,1.35426486594342,3.01187743268168,4.36649840092553,2.02251136000576,2.75475503133812,2.24650318953266,1.27867425159808,0.659702600373432,2.79249120670285,0.426224750532694,3.19230162491442,2.26954089876456,1.24564449799115,1.00499466102697,1.0429658368404,0.217188844705117,2.42159801053347,4.41933163185078,1.26584954976354,1.05627643155971,0.637812899895131,0.628975936525128,1.34794357375794,0.450530678524519,1.12507910687956,1.14005097496499,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0.44024217006613,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.51579964002488,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,11.966458368161,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19115887728894,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.786728553697808,0.383829398097213,0.619264493264304,0,0,0,0,0,0,0,1.40381113229099,1.08505435357926,0.223915474239924,0.971680998056939,1.03030227053675,3.78035420826868,4.53451132426571,1.69808842831471,2.78914844286822,4.52284676824008,2.16794459626573,0.863077176966451,0.512321413058201,0.709446689665756,0.689491361473237,0,1.35426486594342,3.01187743268168,4.36649840092553,2.02251136000576,2.75475503133812,2.24650318953266,1.27867425159808,0.659702600373432,2.79249120670285,0.426224750532694,3.19230162491442,2.26954089876456,1.24564449799115,1.00499466102697,1.0429658368404,0.217188844705117,2.42159801053347,4.41933163185078,1.26584954976354,1.05627643155971,0.637812899895131,0.628975936525128,1.34794357375794,0.450530678524519,1.12507910687956,1.14005097496499,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0.587237189370939,0.382273228125229,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0.348259474598534,0.132957960518865,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0.590789906681404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,0.234004265139238,0,0,0,0,0,0,0,0,0.44024217006613,0,0.288239906833923,0.37872730027914,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,3.51579964002488,2.10833939483032,0,0,0,0,0,0,0,0,0,0.128343036279748,0,0,0,0,0,0,11.966458368161,3.31532410748828,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,1.07857100409308,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.655894752046633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.19115887728894,0.411362273086194,0,0,0,0,0,0,0,0,0,0,0.199579371432817,0,1.05836791361941,0,0,0,0,0,0,0,0,0,0,0,0.223676107892416,0,0.19538809540204,0,0,0.270455678475983,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166211681900156,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202203398942031,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.273810757783986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0.449947783103001,0,0,0,0.0788057072991982,0.104909176269996,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0.244052529803926,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.115233987555779,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0.657887425858975,0.257831551894309,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0.0673520530145875,0,0,0,0,0,0,0,0,0,0,0.402547587182052,0.320568492303233 | ||
|short_description=p@chr19:52146610..52146625,- | |||
}} | }} |
Latest revision as of 16:45, 27 July 2015
Short description: | p@chr19:52146610..52146625, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:52146610..52146625, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.47e-64 | 76 |
bone element | 1.93e-59 | 82 |
hematopoietic system | 1.34e-55 | 98 |
blood island | 1.34e-55 | 98 |
skeletal element | 1.16e-53 | 90 |
immune system | 9.46e-52 | 93 |
hemolymphoid system | 6.57e-50 | 108 |
skeletal system | 9.97e-48 | 100 |
musculoskeletal system | 3.73e-26 | 167 |
lateral plate mesoderm | 1.26e-23 | 203 |
connective tissue | 6.60e-13 | 371 |
mesoderm | 6.99e-13 | 315 |
mesoderm-derived structure | 6.99e-13 | 315 |
presumptive mesoderm | 6.99e-13 | 315 |