FFCP PHASE1:Hg19::chr19:52229515..52229551,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr19:52229515..52229551,-
|short_description=p@chr19:52229515..52229551,-
|description=CAGE_peak_at_chr19:52229515..52229551,-
|association_with_transcript=NA
...") |
No edit summary |
||
(11 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr19:52229515..52229551,- | |||
|description=CAGE_peak_at_chr19:52229515..52229551,- | |||
|id=chr19:52229515..52229551,- | |||
|ontology_enrichment_celltype=CL:0002334!1.09e-07!12 | |||
|ontology_enrichment_celltype_v019=CL:0002570;8.06e-14;8!CL:0000228;1.65e-08;1!CL:0002372;1.65e-08;1!CL:0000222;6.18e-08;1!CL:0000056;8.41e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002570,7.57e-14,8;CL:0000228,1.65e-08,1;CL:0002372,1.65e-08,1;CL:0000515,9.97e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.18e-08;1!CL:0000515;8.41e-08;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!4.73e-15!57;UBERON:0005068!4.73e-15!57;UBERON:0006241!4.73e-15!57;UBERON:0007135!4.73e-15!57;UBERON:0002616!7.89e-14!59;UBERON:0002020!4.91e-12!34;UBERON:0003528!4.91e-12!34;UBERON:0005743!5.74e-12!86;UBERON:0001893!9.32e-12!34;UBERON:0000955!1.10e-11!69;UBERON:0006238!1.10e-11!69;UBERON:0001017!1.80e-11!82;UBERON:0000073!2.11e-11!94;UBERON:0001016!2.11e-11!94;UBERON:0003075!2.57e-11!86;UBERON:0007284!2.57e-11!86;UBERON:0002791!4.75e-11!33;UBERON:0002780!6.06e-11!41;UBERON:0001890!6.06e-11!41;UBERON:0006240!6.06e-11!41;UBERON:0000033!1.17e-10!123;UBERON:0003080!1.60e-10!42;UBERON:0002346!2.55e-10!90;UBERON:0001869!6.63e-10!32;UBERON:0000153!1.50e-09!129;UBERON:0007811!1.50e-09!129;UBERON:0004121!7.43e-09!169;UBERON:0002619!1.41e-08!22;UBERON:0001950!2.04e-08!20;UBERON:0000924!2.58e-08!173;UBERON:0006601!2.58e-08!173;UBERON:0002298!2.80e-08!8;UBERON:0003056!1.02e-07!61;UBERON:0007023!3.81e-07!115;UBERON:0000956!4.06e-07!25;UBERON:0000203!4.06e-07!25;UBERON:0002308!4.22e-07!9;UBERON:0000125!4.22e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0000125;6.77e-19;9!UBERON:0002308;6.77e-19;9!UBERON:0001875;1.15e-14;2!UBERON:0006514;1.15e-14;2!UBERON:0002148;1.51e-14;2!UBERON:0006331;1.51e-14;2!UBERON:0009662;1.51e-14;2!UBERON:0005162;3.52e-14;2!UBERON:0000122;3.52e-14;2!UBERON:0002298;1.19e-10;6!UBERON:0000988;5.35e-10;3!UBERON:0009663;1.89e-09;7!UBERON:0002038;1.97e-08;1!UBERON:0009661;1.97e-08;1!UBERON:0002950;1.97e-08;1!UBERON:0001891;1.97e-08;1!UBERON:0004732;2.06e-08;13!UBERON:0000073;5.25e-08;53!UBERON:0002616;5.25e-08;53!UBERON:0001013;5.98e-08;14!UBERON:0002336;6.18e-08;1!UBERON:0000941;6.18e-08;1!UBERON:0000997;6.18e-08;1!UBERON:0001785;6.18e-08;1!UBERON:0002464;6.18e-08;1!UBERON:0004904;6.18e-08;1!UBERON:0005056;6.18e-08;1!UBERON:0011215;6.18e-08;1!UBERON:0001018;6.18e-08;1!UBERON:0001021;6.18e-08;1!UBERON:0002473;6.18e-08;1!UBERON:0005340;6.18e-08;1!UBERON:0003544;6.18e-08;1!UBERON:0005970;6.18e-08;1!UBERON:0002316;6.18e-08;1!UBERON:0004176;6.18e-08;1!UBERON:0001020;6.18e-08;1!UBERON:0002437;6.18e-08;1!UBERON:0003528;8.39e-08;34!UBERON:0002020;8.39e-08;34!UBERON:0002780;1.62e-07;41!UBERON:0001890;1.62e-07;41!UBERON:0002420;1.90e-07;9!UBERON:0007245;1.90e-07;9!UBERON:0010009;1.90e-07;9!UBERON:0010011;1.90e-07;9!UBERON:0000454;1.90e-07;9!UBERON:0001893;2.45e-07;34 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000125,8.66e-19,9;UBERON:0002308,8.66e-19,9;UBERON:0001049,1.39e-14,56;UBERON:0005068,1.39e-14,56;UBERON:0006241,1.39e-14,56;UBERON:0007135,1.39e-14,56;UBERON:0001875,1.47e-14,2;UBERON:0006514,1.47e-14,2;UBERON:0002148,1.80e-14,2;UBERON:0006331,1.80e-14,2;UBERON:0009662,1.80e-14,2;UBERON:0005162,4.04e-14,2;UBERON:0000122,4.04e-14,2;UBERON:0000073,5.51e-13,53;UBERON:0002616,5.51e-13,53;UBERON:0003528,3.85e-11,34;UBERON:0002020,3.85e-11,34;UBERON:0003075,4.41e-11,82;UBERON:0007284,4.41e-11,82;UBERON:0002298,1.18e-10,6;UBERON:0002346,1.84e-10,86;UBERON:0000988,6.00e-10,3;UBERON:0001016,9.26e-10,89;UBERON:0000955,1.43e-09,68;UBERON:0006238,1.43e-09,68;UBERON:0009663,2.12e-09,7;UBERON:0001017,2.52e-09,81;UBERON:0002780,4.63e-09,41;UBERON:0001890,4.63e-09,41;UBERON:0003080,4.63e-09,41;UBERON:0006240,4.63e-09,41;UBERON:0001893,1.66e-08,34;UBERON:0004732,1.82e-08,13;UBERON:0002038,2.04e-08,1;UBERON:0009661,2.04e-08,1;UBERON:0002950,2.04e-08,1;UBERON:0001891,2.04e-08,1;UBERON:0009616,2.04e-08,1;UBERON:0010286,2.04e-08,1;UBERON:0010371,2.98e-08,104;UBERON:0000941,4.11e-08,1;UBERON:0001785,4.11e-08,1;UBERON:0002464,4.11e-08,1;UBERON:0004904,4.11e-08,1;UBERON:0001021,4.11e-08,1;UBERON:0003902,4.11e-08,1;UBERON:0005425,4.11e-08,1;UBERON:0001013,5.77e-08,14;UBERON:0000997,5.79e-08,1;UBERON:0005056,5.79e-08,1;UBERON:0002336,1.06e-07,1;UBERON:0011215,1.06e-07,1;UBERON:0001018,1.06e-07,1;UBERON:0002473,1.06e-07,1;UBERON:0005340,1.06e-07,1;UBERON:0003544,1.06e-07,1;UBERON:0005970,1.06e-07,1;UBERON:0002316,1.06e-07,1;UBERON:0001020,1.06e-07,1;UBERON:0002437,1.06e-07,1;UBERON:0002420,2.08e-07,9;UBERON:0007245,2.08e-07,9;UBERON:0010009,2.08e-07,9;UBERON:0010011,2.08e-07,9;UBERON:0000454,2.08e-07,9;UBERON:0003056,2.54e-07,61;UBERON:0003076,2.76e-07,15;UBERON:0003057,2.76e-07,15;UBERON:0002791,8.19e-07,32 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0.464858073811369,1.23350366406548,0,0.28769239232215,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,4.27910715122155,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0.106727557803444,0,0,0,0.744323423456331,1.53461973288062,0.561320188866147,0.512556597022804,0,0.160853921143607,0,0.771048469013278,0.532685175939381,0.492762936082855,0,0.813472649219715,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89453753271713,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0.697118721393016,0,0.113942055847001,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55825354416746,0.370691816839509,0.417687798021821,1.01101699471016,0,0.234264445725339,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,3.28572909340783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,2.32140586367385,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.16354660725395,2.38018683136842,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.610131324509816,1.001527445652,0.573409195690071,1.33114861844223,0.496771223531068,0,0,0,0,0,0,0,1.64180283175561,2.33713309847224,0,0.947015026375446,0.50313580350515,0.889811221596536,0.228840068396924,0,0.777186002913902,0,0,0,0,0.414706207840855,0.53168342911599,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0.686791410365586,1.01024846629776,1.26184898228651,0.192619830407303,0.214441591374926,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.449604575675217,1.41696576325585,1.27707087245721,0,0,0.276629009856872,0.161475645631851,1.42769420259154,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.147856086217045,0.270150338473579,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.271878931907327,0.131545547125698,0,0,0,0,0,0,0.431855182437243,0.9555033757741,0.214429632529969,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,1.17785080268967,0.891139200981258,0,0.169927114687817,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,3.44014999563483,0,0.339957450954573,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0.101988829741982,0,0.551369397209069,0,0,0.267964130156178,0,2.27552590896169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.6024118375565,0,0,0,0,0,0.601633342410425,0,0,0,0,0,0,0,0.464858073811369,1.23350366406548,0,0.28769239232215,0.256160706529101,0,0.689491361473237,0.645484683583826,0,0.188242339542605,0.545812300115692,0,0.306083892370903,0.320929027076094,0,0,0,0,0.290209238628584,1.13477044938228,0,0,0,0.217188844705117,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.5905718941022,0,0.0945348171640679,0,0.087834785693126,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0.30648779579902,0.600952235626387,0,0,0,0,0,0,0,0,0.337552664482532,0,0,0,0,0,0,0,0.193260853163297,0.272746120590835,0,0.243947412259191,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0.100528972411631,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.57656445851882,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0.871533458600294,0.199945982364114,0,0,0,0,0,4.27910715122155,1.15825045334063,0,0.537182889719687,0,0,0,0,0,0,0,0,0,0,0,0,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.553107505625109,0,0,0,0,0,0.106727557803444,0,0,0,0.744323423456331,1.53461973288062,0.561320188866147,0.512556597022804,0,0.160853921143607,0,0.771048469013278,0.532685175939381,0.492762936082855,0,0.813472649219715,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0.082509499920588,0,0.650060246036521,0,0,0,0.15350367472613,0,0.107420244868274,0.145016693914229,0,0.0890320356467374,0,0,0.382838137483752,0,0,0.31481234683064,0.6970372701606,0,0,0,0,0,0.372158369359667,0,0.190630193923825,0,0,0.318203247925937,0,0,0,0.117812402345686,0,0,0,0,0.243713489631284,0,0,0,0,0,0,0,0,0,0.202910376962704,0,0.281695602532241,0,0,0,0,0,0.329294892959902,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.89453753271713,0,0,0,0,0,0.281338832821026,0.111308705022906,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185536196323703,0,0,0.0874599999961957,0,0,0,0,0,0,0,0,0.120596438625408,0,0.221158519862449,0,0.219385397153973,0,0.697118721393016,0,0.113942055847001,0.23056390438806,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55825354416746,0.370691816839509,0.417687798021821,1.01101699471016,0,0.234264445725339,0,0.978323094660449,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.27390116638691,0.0870592065804026,0,0,0,0,0,0,0,0,0,0,0.253243183823515,0,0.0801588202515337,0,0,0,0,0,0,0,0,0.135904206073614,0,0,0,1.20084057741958,3.28572909340783,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0.160753148465019,0,0,0,2.32140586367385,0.0607495566580247,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0,0.170388021785422,0,0,0,1.16354660725395,2.38018683136842,0,0,0,0,0,0,0,0,0.638341257770182,0,0.2506898940227,0,0,0,0,0.610131324509816,1.001527445652,0.573409195690071,1.33114861844223,0.496771223531068,0,0,0,0,0,0,0,1.64180283175561,2.33713309847224,0,0.947015026375446,0.50313580350515,0.889811221596536,0.228840068396924,0,0.777186002913902,0,0,0,0,0.414706207840855,0.53168342911599,0,0.150257608997218,0,0,0.181848659202559,0.214821114084977,0,0.398095888698616,0.400027764663154,0.686791410365586,1.01024846629776,1.26184898228651,0.192619830407303,0.214441591374926,0,0,0,0,0,0.308801447160972,0.219284049578707,0,0,0,0,0,0,0.829550616910385,0,0,0,0,0.245772908753719,0,0,0,0,0,0.552317850755522,0.139879507719444,0,0,0,0,0,0,0,0,0,0.318004350653419,0,0,0,0,0.449604575675217,1.41696576325585,1.27707087245721,0,0,0.276629009856872,0.161475645631851,1.42769420259154,0,0.11796972334774,0.183428598521679,0.115525666150338,0,0,0,0.225630985047772,0,0,0,0.163771917510097,0.147856086217045,0.270150338473579,0.781078098613847,0.413373593002368,0.126831620387814,0,0,0,0,0,0,0,0,0,0,0,0.171488009437418,0.271878931907327,0.131545547125698,0,0,0,0,0,0,0.431855182437243,0.9555033757741,0.214429632529969,0,0,0,0,0,0.17071847709395,1.38251932362818,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.109940516745429,0,0.154348316215889,0,0,0,0,1.17785080268967,0.891139200981258,0,0.169927114687817,0.0939839179798536,0,0,0.357107877211315,0,0,0,0,3.44014999563483,0,0.339957450954573,0,0,0,0.462175628631418,0,0,0,0.126698501011437,0.101988829741982,0,0.551369397209069,0,0,0.267964130156178,0,2.27552590896169,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr19:52229515..52229551,- | |||
}} | }} |
Latest revision as of 16:46, 27 July 2015
Short description: | p@chr19:52229515..52229551, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr19:52229515..52229551, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesenchymal stem cell of adipose | 7.57e-14 | 8 |
multinucleate cell | 1.65e-08 | 1 |
myotube | 1.65e-08 | 1 |
skeletal muscle myoblast | 9.97e-08 | 4 |