FFCP PHASE1:Hg19::chr1:152730499..152730507,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:152730499..152730507,+
|short_description=p1@KPRP
|description=CAGE_peak_1_at_KPRP_5end
|association_with_transcript=0bp_to_ENST00000368773,NM_001025231,uc...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=448834 | |EntrezGene=448834 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=31823 | |HGNC=31823 | ||
|TSSclassifier=strong | |||
|UniProt=Q5T749 | |UniProt=Q5T749 | ||
|association_with_transcript=0bp_to_ENST00000368773,NM_001025231,uc001fal.1_5end | |||
|cluster_id=chr1:152730499..152730507,+ | |||
|coexpression_cluster_id=C530 | |||
|description=CAGE_peak_1_at_KPRP_5end | |||
|id=chr1:152730499..152730507,+ | |||
|ontology_enrichment_celltype=CL:0000622!6.16e-12!5;CL:0002159!1.32e-10!13;CL:0000154!7.33e-10!6;CL:0002623!1.08e-07!3;CL:0000362!1.23e-07!8;CL:0002621!1.35e-07!3;CL:0000453!3.70e-07!5;CL:0002251!6.93e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002159;7.96e-20;14!CL:0000622;3.02e-19;5!CL:0000362;1.94e-16;9!CL:0000154;4.51e-16;6!CL:0000317;1.22e-12;2!CL:1000448;1.22e-12;2!CL:0002308;1.22e-12;2!CL:0002140;1.22e-12;2!CL:0000575;1.64e-12;2!CL:0000312;1.61e-11;5!CL:0000150;9.13e-11;9!CL:0000240;1.12e-09;6!CL:0000311;1.12e-09;6!CL:0000079;1.12e-09;6!CL:0000237;1.12e-09;6!CL:0002077;3.78e-09;34!CL:0002623;4.79e-09;3!CL:0002621;1.82e-08;3!CL:0000222;3.84e-07;1!CL:0002601;3.84e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002159,6.89e-20,14;CL:0000622,3.17e-19,5;CL:0000362,1.82e-16,9;CL:0000154,4.69e-16,6;CL:0000317,1.15e-12,2;CL:1000448,1.15e-12,2;CL:0002308,1.15e-12,2;CL:0002140,1.15e-12,2;CL:0000575,1.37e-12,2;CL:0000312,1.55e-11,5;CL:0000150,9.37e-11,9;CL:0002077,5.63e-10,34;CL:0000240,1.08e-09,6;CL:0000311,1.08e-09,6;CL:0000079,1.08e-09,6;CL:0000237,1.08e-09,6;CL:0000036,1.08e-09,6;CL:0000357,1.08e-09,6;CL:0000114,1.08e-09,6;CL:0002623,5.19e-09,3;CL:0002621,2.04e-08,3;CL:0002601,3.41e-07,1 | |||
|ontology_enrichment_development_v019=CL:0000357;1.12e-09;6!CL:0000114;1.12e-09;6!UBERON:0004874;1.74e-07;1!UBERON:0009143;3.02e-07;1 | |||
|ontology_enrichment_disease=DOID:0060084!6.40e-08!3;DOID:127!6.40e-08!3 | |||
|ontology_enrichment_disease_v019=DOID:0060084;6.59e-09;3!DOID:127;6.59e-09;3!DOID:3112;9.91e-08;1!DOID:3151;1.74e-07;1!DOID:3149;1.74e-07;1!DOID:0060072;6.99e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060084,7.72e-09,3;DOID:127,7.72e-09,3;DOID:3112,9.91e-08,1;DOID:3151,1.85e-07,1;DOID:3149,1.85e-07,1;DOID:0060072,7.87e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0003102!1.86e-23!95;UBERON:0000165!9.22e-17!28;UBERON:0000930!9.22e-17!28;UBERON:0000166!3.32e-11!21;UBERON:0000078!5.86e-11!18;UBERON:0001444!1.09e-10!48;UBERON:0002097!2.84e-10!40;UBERON:0002199!5.39e-10!45;UBERON:0002416!5.39e-10!45;UBERON:0000161!2.08e-09!35;UBERON:0001949!1.35e-07!3;UBERON:0005795!5.85e-07!22;UBERON:0001828!7.34e-07!8;UBERON:0004119!8.34e-07!169;UBERON:0000925!8.34e-07!169;UBERON:0006595!8.34e-07!169 | |||
|ontology_enrichment_uberon_v019=UBERON:0001003;5.80e-14;15!UBERON:0007376;5.80e-14;15!UBERON:0002419;1.22e-12;2!UBERON:0007771;1.22e-12;2!UBERON:0003297;1.22e-12;2!UBERON:0001821;1.22e-12;2!UBERON:0003487;1.22e-12;2!UBERON:0001820;1.22e-12;2!UBERON:0000165;1.93e-12;28!UBERON:0010371;6.08e-11;31!UBERON:0001723;4.08e-09;3!UBERON:0001033;4.08e-09;3!UBERON:0001949;1.82e-08;3!UBERON:0000995;1.83e-08;17!UBERON:0007811;4.40e-08;52!UBERON:0003975;5.57e-08;18!UBERON:0007029;1.06e-07;1!UBERON:0005795;1.36e-07;1!UBERON:0000161;1.42e-07;19!UBERON:0000166;1.42e-07;19!UBERON:0000989;1.74e-07;1!UBERON:0008811;1.74e-07;1!UBERON:0002372;1.97e-07;1!UBERON:0001961;1.97e-07;1!UBERON:0001744;1.97e-07;1!UBERON:0001042;1.97e-07;1!UBERON:0001735;1.97e-07;1!UBERON:0000014;3.63e-07;4!UBERON:0000033;4.23e-07;50!UBERON:0003102;7.60e-07;50!UBERON:0004175;8.34e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001003,5.54e-14,15;UBERON:0007376,5.54e-14,15;UBERON:0007383,5.54e-14,15;UBERON:0003102,9.31e-14,99;UBERON:0002419,1.15e-12,2;UBERON:0007771,1.15e-12,2;UBERON:0003297,1.15e-12,2;UBERON:0001821,1.15e-12,2;UBERON:0003487,1.15e-12,2;UBERON:0001820,1.15e-12,2;UBERON:0005089,1.15e-12,2;UBERON:0005088,1.15e-12,2;UBERON:0000166,2.27e-12,22;UBERON:0000165,6.23e-12,29;UBERON:0000930,6.23e-12,29;UBERON:0001444,2.85e-10,49;UBERON:0000153,1.68e-09,62;UBERON:0007811,1.68e-09,62;UBERON:0005795,3.40e-09,22;UBERON:0001723,4.08e-09,3;UBERON:0001033,4.08e-09,3;UBERON:0010056,4.08e-09,3;UBERON:0000033,9.01e-09,56;UBERON:0001949,2.04e-08,3;UBERON:0004121,2.91e-08,171;UBERON:0000924,2.91e-08,171;UBERON:0006601,2.91e-08,171;UBERON:0007029,1.06e-07,1;UBERON:0000989,1.74e-07,1;UBERON:0008811,1.74e-07,1;UBERON:0006258,1.74e-07,1;UBERON:0005876,1.74e-07,1;UBERON:0004874,1.74e-07,1;UBERON:0002372,1.97e-07,1;UBERON:0001961,1.97e-07,1;UBERON:0001744,1.97e-07,1;UBERON:0001735,1.97e-07,1;UBERON:0000161,3.20e-07,36;UBERON:0000014,3.74e-07,4;UBERON:0000995,8.24e-07,21 | |||
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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.45718115317017,3.33705998505986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.436094052142534,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.624320153660641,0.570471821544449,0.298897361103602,0,0,0.140450806702248,0.61246251376468,0,0.309977343527296,0,0,0,0,0.505008341862199,0.250237039743928,7.48073111807294,0,0,0.150238058906597,0,0.179389635688862,0,0.211931901159562,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0.57978255948989,1.09098448236334,1.14721838155602,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.98727597218493,19.1082980537953,2.41269533787914,0.0925884451585296,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0,0.179117045405697,0.290633938513962,7.28427090413901,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.602878754119172,0,0.399891964728228,0,0,0,0,0,0,0,0,0.895304816199478,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0821271560138091,0,0.232420756919918,0,0.802025881213139,0.276242966807689,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.14853107599234,7.80072295243825,0,0,0,0,0,0,0,0,0.0890320356467374,0,0.192190067365106,0,0.10115778085555,0,0.31481234683064,0,0,0,0.869932992075073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438450885253763,0,0,0.202910376962704,0,0,0,0,0,2.83808851256478,0,0,0,0,0,0.670302275535787,0,0,0.43050537267123,0,1.33029046061003,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.0986434056369336,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.94715342388039,1.15425387755696,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.36450574197887,0,0,1.64450309576101,0,0,0,0,0,0.19980960958213,0,0,0,0,0,0,1.08723364858891,2.30126261887133,0,0,0,0,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.449947783103001,0,0,9.39217125277945,0,0,0,0,0,0,0,0,1.08599920350743,0.864221491201268,22.2079404874398,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0,0,0,0,0,0,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.974301544196942,0.132864840313363,0.654261577023377,0,0,0,0,0,0,0,0.184105950251841,6.99397538597222,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.381382095467167,0,0,0,0,0,0,56.5013115409834,0,0,0,0,0,0,0,9.42801238939659,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207216164163037,2.0486217251274,42.8580990324737,0,0.236664001461131,0.0852134047591577,0,0,0,0,0,0,0,0,0,0,43.2282783822634,0,0,0,0,0,0,0,0.218559560503957,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,10.4484651131481,0,0.0645889098360061,0.0620747142958579,0.112131862580613,0,0,13.0630048738177,7.52913262387618,8.14959841476509,0.143444410785353,0,0,0,0,0,0,0.488965776731466,16.6827433109453,0,0,0 | ||
|short_description=p1@KPRP | |||
}} | }} |
Latest revision as of 03:47, 17 September 2015
Short description: | p1@KPRP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_KPRP_5end |
Coexpression cluster: | C530_papillary_salivary_skin_Smooth_leiomyoma_lung_Keratinocyte |
Association with transcript: | 0bp_to_ENST00000368773, NM_001025231, uc001fal.1_5end |
EntrezGene: | KPRP |
HGNC: | 31823 |
UniProt: | Q5T749 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
general ecto-epithelial cell | 6.89e-20 | 14 |
acinar cell | 3.17e-19 | 5 |
epidermal cell | 1.82e-16 | 9 |
protein secreting cell | 4.69e-16 | 6 |
sebum secreting cell | 1.15e-12 | 2 |
epithelial cell of sweat gland | 1.15e-12 | 2 |
epithelial cell of skin gland | 1.15e-12 | 2 |
acinar cell of sebaceous gland | 1.15e-12 | 2 |
corneal epithelial cell | 1.37e-12 | 2 |
keratinocyte | 1.55e-11 | 5 |
glandular epithelial cell | 9.37e-11 | 9 |
ecto-epithelial cell | 5.63e-10 | 34 |
stratified squamous epithelial cell | 1.08e-09 | 6 |
keratin accumulating cell | 1.08e-09 | 6 |
stratified epithelial cell | 1.08e-09 | 6 |
keratinizing barrier epithelial cell | 1.08e-09 | 6 |
epithelial fate stem cell | 1.08e-09 | 6 |
stratified epithelial stem cell | 1.08e-09 | 6 |
surface ectodermal cell | 1.08e-09 | 6 |
acinar cell of salivary gland | 5.19e-09 | 3 |
gingival epithelial cell | 2.04e-08 | 3 |
uterine smooth muscle cell | 3.41e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
cell type benign neoplasm | 7.72e-09 | 3 |
leiomyoma | 7.72e-09 | 3 |
papillary adenocarcinoma | 9.91e-08 | 1 |
skin squamous cell carcinoma | 1.85e-07 | 1 |
keratoacanthoma | 1.85e-07 | 1 |
benign neoplasm | 7.87e-07 | 4 |