FFCP PHASE1:Hg19::chr17:19976961..19976972,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=92521 | |EntrezGene=92521 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30615 | |HGNC=30615 | ||
|TSSclassifier=strong | |||
|UniProt=C9JLR6 | |UniProt=C9JLR6 | ||
|association_with_transcript=14bp_to_ENST00000413167_5end | |association_with_transcript=14bp_to_ENST00000413167_5end | ||
|cluster_id=chr17:19976961..19976972,+ | |||
|coexpression_cluster_id=C3612 | |coexpression_cluster_id=C3612 | ||
|description=CAGE_peak_6_at_SPECC1_5end | |description=CAGE_peak_6_at_SPECC1_5end | ||
|id=chr17:19976961..19976972,+ | |id=chr17:19976961..19976972,+ | ||
|ontology_enrichment_celltype=CL:0000763!3.28e-42!112;CL:0000049!3.28e-42!112;CL:0000766!4.19e-35!76;CL:0000037!4.51e-33!172;CL:0000566!4.51e-33!172;CL:0000839!9.14e-33!70;CL:0000557!1.42e-32!71;CL:0002032!2.04e-31!165;CL:0000837!2.04e-31!165;CL:0000988!2.24e-29!182;CL:0002194!5.44e-28!63;CL:0000576!5.44e-28!63;CL:0000040!5.44e-28!63;CL:0000559!5.44e-28!63;CL:0002009!1.44e-26!65;CL:0002057!2.37e-26!42;CL:0000738!3.03e-25!140;CL:0000860!1.27e-23!45;CL:0002031!1.73e-20!124;CL:0002087!6.48e-19!119;CL:0002274!3.24e-07!5;CL:0000457!3.24e-07!5;CL:0002191!3.24e-07!5;CL:0000097!3.24e-07!5;CL:0000831!3.24e-07!5;CL:0002028!3.24e-07!5;CL:0002393!3.50e-07!9;CL:0002397!3.50e-07!9 | |ontology_enrichment_celltype=CL:0000763!3.28e-42!112;CL:0000049!3.28e-42!112;CL:0000766!4.19e-35!76;CL:0000037!4.51e-33!172;CL:0000566!4.51e-33!172;CL:0000839!9.14e-33!70;CL:0000557!1.42e-32!71;CL:0002032!2.04e-31!165;CL:0000837!2.04e-31!165;CL:0000988!2.24e-29!182;CL:0002194!5.44e-28!63;CL:0000576!5.44e-28!63;CL:0000040!5.44e-28!63;CL:0000559!5.44e-28!63;CL:0002009!1.44e-26!65;CL:0002057!2.37e-26!42;CL:0000738!3.03e-25!140;CL:0000860!1.27e-23!45;CL:0002031!1.73e-20!124;CL:0002087!6.48e-19!119;CL:0002274!3.24e-07!5;CL:0000457!3.24e-07!5;CL:0002191!3.24e-07!5;CL:0000097!3.24e-07!5;CL:0000831!3.24e-07!5;CL:0002028!3.24e-07!5;CL:0002393!3.50e-07!9;CL:0002397!3.50e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0000576;1.70e-13;48!CL:0000097;2.16e-13;5!CL:0000763;2.26e-11;100!CL:0000766;2.44e-11;69!CL:0000860;5.42e-11;33!CL:0002057;5.42e-11;33!CL:0000473;6.30e-11;39!CL:0000234;6.30e-11;39!CL:0000163;3.56e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000763,3.47e-38,108;CL:0000049,3.47e-38,108;CL:0000766,4.54e-27,72;CL:0000037,1.25e-25,168;CL:0000557,6.20e-24,67;CL:0000988,1.38e-23,177;CL:0002032,1.44e-23,161;CL:0000837,1.44e-23,161;CL:0000839,1.89e-22,66;CL:0000738,6.50e-17,136;CL:0002194,2.48e-16,59;CL:0000576,2.48e-16,59;CL:0000040,2.48e-16,59;CL:0000559,2.48e-16,59;CL:0002009,1.39e-15,61;CL:0000097,2.13e-13,5;CL:0002028,2.13e-13,5;CL:0000473,3.83e-13,48;CL:0000234,3.83e-13,48;CL:0000860,1.38e-12,42;CL:0002057,1.38e-12,42;CL:0002031,1.53e-10,120;CL:0002087,2.90e-08,115;CL:0000163,3.53e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000049;1.57e-10;108!CL:0002057;9.06e-09;42 | |||
|ontology_enrichment_disease=DOID:8692!3.39e-08!31;DOID:1240!9.94e-08!39 | |ontology_enrichment_disease=DOID:8692!3.39e-08!31;DOID:1240!9.94e-08!39 | ||
|ontology_enrichment_disease_v019=DOID:8692;6.79e-11;31!DOID:1240;1.29e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:8692,2.29e-11,31;DOID:1240,3.54e-11,39;DOID:2531,1.27e-07,51;DOID:0060083,1.27e-07,51 | |||
|ontology_enrichment_uberon=UBERON:0002390!6.70e-40!102;UBERON:0003061!6.70e-40!102;UBERON:0002193!6.35e-35!112;UBERON:0007023!1.74e-32!115;UBERON:0002371!5.75e-32!80;UBERON:0001474!1.76e-30!86;UBERON:0004765!8.30e-24!101;UBERON:0001434!8.30e-24!101;UBERON:0002405!9.19e-21!115;UBERON:0001049!2.08e-16!57;UBERON:0005068!2.08e-16!57;UBERON:0006241!2.08e-16!57;UBERON:0007135!2.08e-16!57;UBERON:0002780!3.31e-16!41;UBERON:0001890!3.31e-16!41;UBERON:0006240!3.31e-16!41;UBERON:0001893!1.14e-15!34;UBERON:0003080!1.43e-15!42;UBERON:0002020!2.10e-15!34;UBERON:0003528!2.10e-15!34;UBERON:0002616!4.38e-15!59;UBERON:0002791!6.78e-15!33;UBERON:0001869!2.49e-14!32;UBERON:0000955!4.94e-13!69;UBERON:0006238!4.94e-13!69;UBERON:0003075!2.88e-12!86;UBERON:0007284!2.88e-12!86;UBERON:0001017!5.11e-12!82;UBERON:0005743!1.92e-11!86;UBERON:0000956!3.24e-11!25;UBERON:0000203!3.24e-11!25;UBERON:0002619!3.50e-11!22;UBERON:0002346!4.24e-11!90;UBERON:0003056!6.95e-11!61;UBERON:0002204!3.51e-10!167;UBERON:0003081!6.21e-10!216;UBERON:0000073!7.62e-10!94;UBERON:0001016!7.62e-10!94;UBERON:0001950!9.88e-10!20;UBERON:0000178!5.19e-08!15;UBERON:0000179!5.19e-08!15;UBERON:0000463!5.19e-08!15;UBERON:0000153!1.56e-07!129;UBERON:0007811!1.56e-07!129 | |ontology_enrichment_uberon=UBERON:0002390!6.70e-40!102;UBERON:0003061!6.70e-40!102;UBERON:0002193!6.35e-35!112;UBERON:0007023!1.74e-32!115;UBERON:0002371!5.75e-32!80;UBERON:0001474!1.76e-30!86;UBERON:0004765!8.30e-24!101;UBERON:0001434!8.30e-24!101;UBERON:0002405!9.19e-21!115;UBERON:0001049!2.08e-16!57;UBERON:0005068!2.08e-16!57;UBERON:0006241!2.08e-16!57;UBERON:0007135!2.08e-16!57;UBERON:0002780!3.31e-16!41;UBERON:0001890!3.31e-16!41;UBERON:0006240!3.31e-16!41;UBERON:0001893!1.14e-15!34;UBERON:0003080!1.43e-15!42;UBERON:0002020!2.10e-15!34;UBERON:0003528!2.10e-15!34;UBERON:0002616!4.38e-15!59;UBERON:0002791!6.78e-15!33;UBERON:0001869!2.49e-14!32;UBERON:0000955!4.94e-13!69;UBERON:0006238!4.94e-13!69;UBERON:0003075!2.88e-12!86;UBERON:0007284!2.88e-12!86;UBERON:0001017!5.11e-12!82;UBERON:0005743!1.92e-11!86;UBERON:0000956!3.24e-11!25;UBERON:0000203!3.24e-11!25;UBERON:0002619!3.50e-11!22;UBERON:0002346!4.24e-11!90;UBERON:0003056!6.95e-11!61;UBERON:0002204!3.51e-10!167;UBERON:0003081!6.21e-10!216;UBERON:0000073!7.62e-10!94;UBERON:0001016!7.62e-10!94;UBERON:0001950!9.88e-10!20;UBERON:0000178!5.19e-08!15;UBERON:0000179!5.19e-08!15;UBERON:0000463!5.19e-08!15;UBERON:0000153!1.56e-07!129;UBERON:0007811!1.56e-07!129 | ||
|ontology_enrichment_uberon_v019=UBERON:0002619;2.33e-17;22!UBERON:0001950;9.10e-17;20!UBERON:0000956;6.44e-15;25!UBERON:0000203;6.44e-15;25!UBERON:0001869;1.56e-14;32!UBERON:0001893;2.66e-14;34!UBERON:0000178;3.74e-14;15!UBERON:0000179;3.74e-14;15!UBERON:0000463;3.74e-14;15!UBERON:0002791;3.94e-14;32!UBERON:0003528;4.09e-14;34!UBERON:0002020;4.09e-14;34!UBERON:0002780;1.12e-11;41!UBERON:0001890;1.12e-11;41!UBERON:0000073;1.56e-09;53!UBERON:0002616;1.56e-09;53!UBERON:0002390;1.87e-09;32!UBERON:0000200;1.20e-08;6!UBERON:0001872;3.16e-07;5!UBERON:0001870;6.36e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,9.34e-32,98;UBERON:0003061,9.34e-32,98;UBERON:0002193,1.07e-27,108;UBERON:0002371,2.40e-23,76;UBERON:0001474,1.92e-22,82;UBERON:0004765,1.28e-19,90;UBERON:0001434,5.47e-18,100;UBERON:0002619,1.27e-17,22;UBERON:0002405,1.98e-17,93;UBERON:0001893,3.66e-17,34;UBERON:0003528,4.16e-17,34;UBERON:0002020,4.16e-17,34;UBERON:0001950,6.30e-17,20;UBERON:0001869,1.43e-16,32;UBERON:0002791,1.91e-16,32;UBERON:0000956,3.80e-15,25;UBERON:0000203,3.80e-15,25;UBERON:0002780,4.90e-15,41;UBERON:0001890,4.90e-15,41;UBERON:0003080,4.90e-15,41;UBERON:0006240,4.90e-15,41;UBERON:0001049,5.42e-15,56;UBERON:0005068,5.42e-15,56;UBERON:0006241,5.42e-15,56;UBERON:0007135,5.42e-15,56;UBERON:0000073,1.50e-14,53;UBERON:0002616,1.50e-14,53;UBERON:0000178,2.63e-14,15;UBERON:0000179,2.63e-14,15;UBERON:0000463,2.63e-14,15;UBERON:0007023,4.82e-13,114;UBERON:0000955,6.66e-10,68;UBERON:0006238,6.66e-10,68;UBERON:0003056,1.14e-09,61;UBERON:0003081,1.93e-09,203;UBERON:0003075,2.32e-09,82;UBERON:0007284,2.32e-09,82;UBERON:0000200,8.41e-09,6;UBERON:0002346,1.17e-08,86;UBERON:0001017,1.99e-08,81;UBERON:0001016,7.16e-08,89;UBERON:0001870,2.81e-07,3;UBERON:0002204,2.92e-07,167;UBERON:0001872,3.11e-07,5 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0.136874425072884,0,0.0764134057479513,0,0,2.36018566109342,0.383829398097213,1.39334510984468,0,0,0,0,0,2.34880351467878,1.10799081706375,0.601633342410425,0.868043482863407,2.68698569087909,0.971680998056939,1.03030227053675,2.18097358169347,1.13362783106643,1.4555043671269,0.232429036905685,0,2.78735733805593,0.28769239232215,0.768482119587302,1.41889337933151,0,1.29096936716765,2.70852973188684,0.376484679085209,0.272906150057846,0.898893937780338,0.612167784741805,0.962787081228281,1.27867425159808,0.989553900560148,0.997318288108159,1.27867425159808,1.16083695451434,0.56738522469114,0.622822248995575,0.251248665256743,2.08593167368081,0.434377689410233,0,1.47311054395026,0.949387162322653,1.69004229049553,1.27562579979026,0.419317291016752,2.3589012540764,2.25265339262259,5.14321877430656,0.570025487482497,0.39783335439818,0.182664153764634,0,0.546138611262131,0,0,0,0,0.661044872784862,0,0,0,0,0,0.560508562981536,1.58030450865046,0,0,0.205601498999509,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150575119077773,0,0,0.473554504088034,0,0.403213486449465,0.267440195783507,0.289648807765598,0,0,0,0,0,0.144846518960824,0,0,0,0.221729397462564,0.087834785693126,0.196468613246569,0,0,0,0.174129737299267,0.132957960518865,0.715471872916026,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103325781175765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,1.23108503043699,0.234004265139238,1.18904929830983,0,0,0,0,0,0,7.8826118063351,8.01240749520357,4.14656231081544,3.60299883542404,4.79721247020244,0,0,0,0,0,0,0,0,0.43596006883328,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,0,0.502257091432126,0,0,0,0,0,0,0,0.112085143993527,0.394061520403854,0,0.898401253958239,0,0,0,0,0,2.99602809578873,2.99161459204025,0,0,0,0,0,0,0,0,0.601892199455438,0,0,0,0.184369168541703,0,0,0,1.03384013061444,1.72571360654893,0.960548020230999,0,0,0,0,0,0.280660094433074,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261435451024901,0,0,0,0.206082023295445,0.0915694648183434,0,0,0,0,0,0,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0.316379424718726,0,0,0,0,0,0.179872457583315,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.53723804616085,3.82318603571188,3.41788312304498,1.66762242820452,3.29089818468955,3.24236655596359,3.24018862342869,2.37937552888281,0,0,0,0,0,0,0,0.997896857164083,2.2980644415884,1.2700414963433,0,0,4.33645890163065,0.47003968731907,5.01268954180134,6.26379577865932,2.40882112655549,3.02699560786571,1.27753871307098,1.03051603426729,2.45792611446766,2.01308497103174,1.66849141711908,1.17232857241224,0,0,0.540911356951966,0,0,0,0.586032717087576,0,1.33732061132974,0,0,0,0,0,1.26602474769461,0,0,0,0.796991953004279,0.276283915531148,0,0,0,0,0,0,1.53471711068062,0.295930216910801,0,0,0,0.74214478529481,0,0,0,0,0,0,0,0,0,0,0,0.723578631752448,0,0,0.295547618953547,0.658156191461918,0,0,0.461701551022782,0,0,0,0,0,0,0,2.04386596391473,0.941881538370149,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0.876214728748802,0,0.937057782901357,0,0,0,0,0,0.30607276163049,0.947798694427319,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,1.58276989889697,0,0,0.426905989478705,0,0,0,0,0,0,0,0,0.104602846312333,0.407992870545287,0,0.600420288709789,1.50595916781192,5.10986352267889,0,0,0.279282401272254,0.687481272035051,0,0,0,0,0.335917362433631,0,0,0,0,0,0,0,0.795229689809303,1.63444087333891,0,0,0,0,0,1.51873891645062,0,0.157611414598396,0.157363764404994,0,0,0,0.714695326373367,0,0,0,0,0,0,0.164185041498678,0,0,0,0,0.258565912723101,1.19009341568421,0,0,0.320362237703084,0.157204305099666,0,0,0.988058159489721,0,0,0,0,0.612691153526923,0,0,1.77213635993397,0.244052529803926,1.251909307065,0,1.10929051536852,1.30402446176905,0,0,0,0,0,0,0,0,0,0,1.32582103692562,0,0.889811221596536,0,0,0,0,0,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.65910123382077,3.89720617678777,1.72724292407372,2.61704630809351,0,0,0,0,0.426766918776564,0.344429959321631,0,0,0,0.622077260032973,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22035527683273,0,2.87340946302872,1.02558182120378,0,1.24483054435592,1.45328081068666,1.42769420259154,0,0,0,0,0,0,1.19349733269765,0.150420656698515,0,0,0,0,0,1.2832141077495,1.56215619722769,2.06686796501184,1.52197944465376,0,0,0,0,0,0,0.672567444437648,0,0,0.0887023701626388,0,0.514464028312255,0.543757863814654,1.05236437700559,0,0,0.235479278551542,0.157115589916002,0,0,0,0,0.214429632529969,0,0,0,0,0,0,0,0.860454717640555,0,0,0.423387050190929,0,0,0,0,0,0,0.647428837187895,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0.245148321753905,0,0,2.0793248022896,0.4226557275834,0,0.281951753939561,0.0644578879735772,0,0,0,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| ||
|short_description=p6@SPECC1 | |short_description=p6@SPECC1 | ||
}} | }} |
Latest revision as of 01:05, 19 September 2015
Short description: | p6@SPECC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SPECC1_5end |
Coexpression cluster: | C3612_Mast_granulocyte_CD14_migratory_Neutrophils_Whole_acute |
Association with transcript: | 14bp_to_ENST00000413167_5end |
EntrezGene: | SPECC1 |
HGNC: | 30615 |
UniProt: | C9JLR6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid cell | 3.47e-38 | 108 |
common myeloid progenitor | 3.47e-38 | 108 |
myeloid leukocyte | 4.54e-27 | 72 |
hematopoietic stem cell | 1.25e-25 | 168 |
granulocyte monocyte progenitor cell | 6.20e-24 | 67 |
hematopoietic cell | 1.38e-23 | 177 |
hematopoietic oligopotent progenitor cell | 1.44e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.44e-23 | 161 |
myeloid lineage restricted progenitor cell | 1.89e-22 | 66 |
leukocyte | 6.50e-17 | 136 |
monopoietic cell | 2.48e-16 | 59 |
monocyte | 2.48e-16 | 59 |
monoblast | 2.48e-16 | 59 |
promonocyte | 2.48e-16 | 59 |
macrophage dendritic cell progenitor | 1.39e-15 | 61 |
mast cell | 2.13e-13 | 5 |
basophil mast progenitor cell | 2.13e-13 | 5 |
defensive cell | 3.83e-13 | 48 |
phagocyte | 3.83e-13 | 48 |
classical monocyte | 1.38e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.38e-12 | 42 |
hematopoietic lineage restricted progenitor cell | 1.53e-10 | 120 |
nongranular leukocyte | 2.90e-08 | 115 |
endocrine cell | 3.53e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
myeloid leukemia | 2.29e-11 | 31 |
leukemia | 3.54e-11 | 39 |
hematologic cancer | 1.27e-07 | 51 |
immune system cancer | 1.27e-07 | 51 |