FFCP PHASE1:Hg19::chr1:183536107..183536129,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr1:183536107..183536129,-
|short_description=p@chr1:183536107..183536129,-
|description=CAGE_peak_at_chr1:183536107..183536129,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:183536107..183536129,- | |||
|coexpression_cluster_id=C329 | |||
|description=CAGE_peak_at_chr1:183536107..183536129,- | |||
|id=chr1:183536107..183536129,- | |||
|ontology_enrichment_celltype=CL:0002194!1.03e-59!63;CL:0000576!1.03e-59!63;CL:0000040!1.03e-59!63;CL:0000559!1.03e-59!63;CL:0002057!1.08e-59!42;CL:0002009!1.93e-59!65;CL:0000766!2.75e-57!76;CL:0000860!1.32e-54!45;CL:0000557!9.09e-53!71;CL:0000839!8.04e-52!70;CL:0002087!2.97e-44!119;CL:0000738!4.99e-44!140;CL:0000763!9.87e-42!112;CL:0000049!9.87e-42!112;CL:0002031!7.25e-40!124;CL:0000037!6.13e-39!172;CL:0000566!6.13e-39!172;CL:0002032!1.14e-36!165;CL:0000837!1.14e-36!165;CL:0000988!2.52e-35!182;CL:0002393!1.40e-12!9;CL:0002397!1.40e-12!9;CL:0000134!1.48e-07!358;CL:0002320!5.01e-07!365 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.08e-84;33!CL:0002057;2.08e-84;33!CL:0000473;7.49e-83;39!CL:0000234;7.49e-83;39!CL:0000576;1.05e-58;48!CL:0000766;4.50e-50;69!CL:0000763;4.05e-22;100!CL:0000235;1.82e-16;6!CL:0000738;3.23e-15;136!CL:0002087;3.89e-14;104!CL:0002393;1.11e-11;6!CL:0002397;1.11e-11;6!CL:0000775;1.12e-09;3!CL:0000875;9.95e-09;3!CL:0002396;9.95e-09;3!CL:0000988;1.00e-08;177!CL:0000094;1.19e-08;8!CL:0000219;4.40e-07;193 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.63e-126,48;CL:0000234,1.63e-126,48;CL:0000860,1.35e-110,42;CL:0002057,1.35e-110,42;CL:0002194,1.29e-107,59;CL:0000576,1.29e-107,59;CL:0000040,1.29e-107,59;CL:0000559,1.29e-107,59;CL:0000766,4.08e-106,72;CL:0002009,9.93e-104,61;CL:0000839,5.01e-95,66;CL:0000557,1.93e-93,67;CL:0000763,1.41e-66,108;CL:0000049,1.41e-66,108;CL:0000738,1.39e-56,136;CL:0002087,2.87e-56,115;CL:0002031,4.14e-51,120;CL:0002032,8.01e-44,161;CL:0000837,8.01e-44,161;CL:0000037,3.17e-43,168;CL:0000988,2.46e-40,177;CL:0002393,1.40e-18,9;CL:0002397,1.40e-18,9;CL:0000235,1.95e-16,6;CL:0000134,2.44e-13,354;CL:0002320,8.07e-13,361;CL:0000219,5.40e-11,386;CL:0000775,1.04e-09,3;CL:0000048,8.83e-09,427;CL:0000875,1.13e-08,3;CL:0002396,1.13e-08,3;CL:0000094,1.19e-08,8;CL:0000723,1.77e-08,433;CL:0000034,4.36e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.76e-79;42!CL:0000049;3.34e-21;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!4.63e-59!102;UBERON:0003061!4.63e-59!102;UBERON:0002193!2.60e-53!112;UBERON:0002371!1.99e-46!80;UBERON:0001474!8.06e-42!86;UBERON:0002405!4.95e-36!115;UBERON:0004765!1.82e-35!101;UBERON:0001434!1.82e-35!101;UBERON:0003081!8.41e-18!216;UBERON:0002204!8.45e-15!167;UBERON:0000178!4.48e-10!15;UBERON:0000179!4.48e-10!15;UBERON:0000463!4.48e-10!15 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.83e-16;15!UBERON:0000179;2.83e-16;15!UBERON:0000463;2.83e-16;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,2.78e-90,98;UBERON:0003061,2.78e-90,98;UBERON:0002371,5.17e-81,76;UBERON:0002193,1.06e-80,108;UBERON:0001474,3.17e-74,82;UBERON:0004765,1.44e-66,90;UBERON:0002405,4.93e-64,93;UBERON:0001434,1.05e-58,100;UBERON:0003081,1.63e-36,203;UBERON:0002204,3.34e-30,167;UBERON:0000926,1.47e-18,315;UBERON:0004120,1.47e-18,315;UBERON:0006603,1.47e-18,315;UBERON:0000178,2.40e-16,15;UBERON:0000179,2.40e-16,15;UBERON:0000463,2.40e-16,15;UBERON:0002384,4.12e-12,371 | |||
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| ||
|short_description=p@chr1:183536107..183536129,- | |||
}} | }} |
Latest revision as of 01:14, 28 July 2015
Short description: | p@chr1:183536107..183536129, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:183536107..183536129, - |
Coexpression cluster: | C329_Neutrophils_CD14_Monocytederived_Whole_Peripheral_CD14CD16_Eosinophils |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 2.78e-90 | 98 |
blood island | 2.78e-90 | 98 |
bone marrow | 5.17e-81 | 76 |
hemolymphoid system | 1.06e-80 | 108 |
bone element | 3.17e-74 | 82 |
skeletal element | 1.44e-66 | 90 |
immune system | 4.93e-64 | 93 |
skeletal system | 1.05e-58 | 100 |
lateral plate mesoderm | 1.63e-36 | 203 |
musculoskeletal system | 3.34e-30 | 167 |
mesoderm | 1.47e-18 | 315 |
mesoderm-derived structure | 1.47e-18 | 315 |
presumptive mesoderm | 1.47e-18 | 315 |
blood | 2.40e-16 | 15 |
haemolymphatic fluid | 2.40e-16 | 15 |
organism substance | 2.40e-16 | 15 |
connective tissue | 4.12e-12 | 371 |