FFCP PHASE1:Hg19::chr3:116163841..116163855,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4045 | |EntrezGene=4045 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6705 | |HGNC=6705 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-11bp_to_ENST00000333617_5end | |association_with_transcript=-11bp_to_ENST00000333617_5end | ||
|cluster_id=chr3:116163841..116163855,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_LSAMP_5end | |description=CAGE_peak_4_at_LSAMP_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.30e-20;82!UBERON:0006215;2.34e-17;3!UBERON:0010122;1.42e-11;2!UBERON:0006241;3.08e-08;3!UBERON:0003057;3.08e-08;3 | |ontology_enrichment_development_v019=UBERON:0006601;6.30e-20;82!UBERON:0006215;2.34e-17;3!UBERON:0010122;1.42e-11;2!UBERON:0006241;3.08e-08;3!UBERON:0003057;3.08e-08;3 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.95e-67!57;UBERON:0005068!1.95e-67!57;UBERON:0006241!1.95e-67!57;UBERON:0007135!1.95e-67!57;UBERON:0003075!1.30e-59!86;UBERON:0007284!1.30e-59!86;UBERON:0002346!2.90e-56!90;UBERON:0001017!1.18e-55!82;UBERON:0002616!2.92e-55!59;UBERON:0005743!1.67e-54!86;UBERON:0000073!4.12e-52!94;UBERON:0001016!4.12e-52!94;UBERON:0000955!1.54e-49!69;UBERON:0006238!1.54e-49!69;UBERON:0002780!5.06e-43!41;UBERON:0001890!5.06e-43!41;UBERON:0006240!5.06e-43!41;UBERON:0003080!8.74e-42!42;UBERON:0007023!1.95e-39!115;UBERON:0003056!6.41e-38!61;UBERON:0000033!2.79e-36!123;UBERON:0000153!6.93e-34!129;UBERON:0007811!6.93e-34!129;UBERON:0002020!1.26e-33!34;UBERON:0003528!1.26e-33!34;UBERON:0001893!1.53e-33!34;UBERON:0004121!3.66e-33!169;UBERON:0000924!5.30e-32!173;UBERON:0006601!5.30e-32!173;UBERON:0002791!8.30e-32!33;UBERON:0001869!7.62e-30!32;UBERON:0003076!4.27e-27!15;UBERON:0003057!4.27e-27!15;UBERON:0002619!1.37e-23!22;UBERON:0001950!5.38e-23!20;UBERON:0004733!3.26e-21!12;UBERON:0002028!3.26e-21!12;UBERON:0007277!3.26e-21!12;UBERON:0000956!2.79e-20!25;UBERON:0000203!2.79e-20!25;UBERON:0004732!2.37e-19!13;UBERON:0000025!5.56e-16!194;UBERON:0002308!8.52e-16!9;UBERON:0000125!8.52e-16!9;UBERON:0002420!9.92e-16!9;UBERON:0007245!9.92e-16!9;UBERON:0010009!9.92e-16!9;UBERON:0010011!9.92e-16!9;UBERON:0000454!9.92e-16!9;UBERON:0002680!4.14e-15!9;UBERON:0001895!4.14e-15!9;UBERON:0010092!4.14e-15!9;UBERON:0002298!7.36e-14!8;UBERON:0000200!4.89e-13!6;UBERON:0000477!2.71e-12!286;UBERON:0009663!8.27e-12!7;UBERON:0001894!5.47e-11!7;UBERON:0006222!5.47e-11!7;UBERON:0005174!5.84e-11!5;UBERON:0001137!5.84e-11!5;UBERON:0004111!8.34e-11!241;UBERON:0000483!1.01e-10!309;UBERON:0000119!1.80e-10!312;UBERON:0000369!7.73e-10!4;UBERON:0002435!7.73e-10!4;UBERON:0000204!7.73e-10!4;UBERON:0010082!7.73e-10!4;UBERON:0000475!7.92e-10!365;UBERON:0001871!1.26e-09!7;UBERON:0000064!2.90e-09!219;UBERON:0002037!3.90e-09!6;UBERON:0006215!3.90e-09!6;UBERON:0000488!6.05e-08!4;UBERON:0000062!6.32e-08!511;UBERON:0005383!6.87e-08!3;UBERON:0005382!6.87e-08!3;UBERON:0001896!7.03e-08!3;UBERON:0005290!7.03e-08!3;UBERON:0010096!7.03e-08!3;UBERON:0000988!7.68e-08!3;UBERON:0006331!9.78e-08!3;UBERON:0000349!1.09e-07!5;UBERON:0002240!1.45e-07!3;UBERON:0000481!1.57e-07!347;UBERON:0002771!2.00e-07!3;UBERON:0001872!3.04e-07!5 | |ontology_enrichment_uberon=UBERON:0001049!1.95e-67!57;UBERON:0005068!1.95e-67!57;UBERON:0006241!1.95e-67!57;UBERON:0007135!1.95e-67!57;UBERON:0003075!1.30e-59!86;UBERON:0007284!1.30e-59!86;UBERON:0002346!2.90e-56!90;UBERON:0001017!1.18e-55!82;UBERON:0002616!2.92e-55!59;UBERON:0005743!1.67e-54!86;UBERON:0000073!4.12e-52!94;UBERON:0001016!4.12e-52!94;UBERON:0000955!1.54e-49!69;UBERON:0006238!1.54e-49!69;UBERON:0002780!5.06e-43!41;UBERON:0001890!5.06e-43!41;UBERON:0006240!5.06e-43!41;UBERON:0003080!8.74e-42!42;UBERON:0007023!1.95e-39!115;UBERON:0003056!6.41e-38!61;UBERON:0000033!2.79e-36!123;UBERON:0000153!6.93e-34!129;UBERON:0007811!6.93e-34!129;UBERON:0002020!1.26e-33!34;UBERON:0003528!1.26e-33!34;UBERON:0001893!1.53e-33!34;UBERON:0004121!3.66e-33!169;UBERON:0000924!5.30e-32!173;UBERON:0006601!5.30e-32!173;UBERON:0002791!8.30e-32!33;UBERON:0001869!7.62e-30!32;UBERON:0003076!4.27e-27!15;UBERON:0003057!4.27e-27!15;UBERON:0002619!1.37e-23!22;UBERON:0001950!5.38e-23!20;UBERON:0004733!3.26e-21!12;UBERON:0002028!3.26e-21!12;UBERON:0007277!3.26e-21!12;UBERON:0000956!2.79e-20!25;UBERON:0000203!2.79e-20!25;UBERON:0004732!2.37e-19!13;UBERON:0000025!5.56e-16!194;UBERON:0002308!8.52e-16!9;UBERON:0000125!8.52e-16!9;UBERON:0002420!9.92e-16!9;UBERON:0007245!9.92e-16!9;UBERON:0010009!9.92e-16!9;UBERON:0010011!9.92e-16!9;UBERON:0000454!9.92e-16!9;UBERON:0002680!4.14e-15!9;UBERON:0001895!4.14e-15!9;UBERON:0010092!4.14e-15!9;UBERON:0002298!7.36e-14!8;UBERON:0000200!4.89e-13!6;UBERON:0000477!2.71e-12!286;UBERON:0009663!8.27e-12!7;UBERON:0001894!5.47e-11!7;UBERON:0006222!5.47e-11!7;UBERON:0005174!5.84e-11!5;UBERON:0001137!5.84e-11!5;UBERON:0004111!8.34e-11!241;UBERON:0000483!1.01e-10!309;UBERON:0000119!1.80e-10!312;UBERON:0000369!7.73e-10!4;UBERON:0002435!7.73e-10!4;UBERON:0000204!7.73e-10!4;UBERON:0010082!7.73e-10!4;UBERON:0000475!7.92e-10!365;UBERON:0001871!1.26e-09!7;UBERON:0000064!2.90e-09!219;UBERON:0002037!3.90e-09!6;UBERON:0006215!3.90e-09!6;UBERON:0000488!6.05e-08!4;UBERON:0000062!6.32e-08!511;UBERON:0005383!6.87e-08!3;UBERON:0005382!6.87e-08!3;UBERON:0001896!7.03e-08!3;UBERON:0005290!7.03e-08!3;UBERON:0010096!7.03e-08!3;UBERON:0000988!7.68e-08!3;UBERON:0006331!9.78e-08!3;UBERON:0000349!1.09e-07!5;UBERON:0002240!1.45e-07!3;UBERON:0000481!1.57e-07!347;UBERON:0002771!2.00e-07!3;UBERON:0001872!3.04e-07!5 | ||
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|short_description=p4@LSAMP | |short_description=p4@LSAMP | ||
}} | }} |
Latest revision as of 18:20, 19 September 2015
Short description: | p4@LSAMP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_LSAMP_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -11bp_to_ENST00000333617_5end |
EntrezGene: | LSAMP |
HGNC: | 6705 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data