FFCP PHASE1:Hg19::chr4:3388057..3388075,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6002 | |EntrezGene=6002 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9994 | |HGNC=9994 | ||
|TSSclassifier=strong | |||
|UniProt=B7Z764 | |UniProt=B7Z764 | ||
|association_with_transcript=0bp_to_ENST00000538395_5end | |association_with_transcript=0bp_to_ENST00000538395_5end | ||
|cluster_id=chr4:3388057..3388075,+ | |||
|description=CAGE_peak_9_at_RGS12_5end | |description=CAGE_peak_9_at_RGS12_5end | ||
|id=chr4:3388057..3388075,+ | |id=chr4:3388057..3388075,+ | ||
|ontology_enrichment_celltype=CL:0002076!7.95e-20!43;CL:0000223!9.97e-15!59;CL:0000066!2.46e-13!254;CL:0002159!4.32e-13!13;CL:0002251!1.07e-12!21;CL:0002368!3.92e-11!13;CL:0000622!6.28e-10!5;CL:0000244!4.79e-09!4;CL:0000731!4.79e-09!4;CL:0002077!6.37e-09!33;CL:0000154!3.62e-08!6;CL:0000150!2.97e-07!9;CL:0002621!4.54e-07!3;CL:0000068!6.06e-07!3;CL:0000069!6.06e-07!3;CL:0000307!6.06e-07!3;CL:0000377!6.06e-07!3;CL:0002623!9.72e-07!3 | |ontology_enrichment_celltype=CL:0002076!7.95e-20!43;CL:0000223!9.97e-15!59;CL:0000066!2.46e-13!254;CL:0002159!4.32e-13!13;CL:0002251!1.07e-12!21;CL:0002368!3.92e-11!13;CL:0000622!6.28e-10!5;CL:0000244!4.79e-09!4;CL:0000731!4.79e-09!4;CL:0002077!6.37e-09!33;CL:0000154!3.62e-08!6;CL:0000150!2.97e-07!9;CL:0002621!4.54e-07!3;CL:0000068!6.06e-07!3;CL:0000069!6.06e-07!3;CL:0000307!6.06e-07!3;CL:0000377!6.06e-07!3;CL:0002623!9.72e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002076;1.63e-30;42!CL:0002251;1.07e-22;20!CL:0002368;6.90e-20;13!CL:0000244;3.23e-18;4!CL:0000731;3.23e-18;4!CL:0002621;8.73e-14;3!CL:0002159;1.00e-13;14!CL:0000307;1.28e-13;3!CL:0000622;1.39e-13;5!CL:0002623;6.41e-13;3!CL:0002202;9.78e-12;9!CL:0002632;9.78e-12;9!CL:0000154;2.46e-11;6!CL:0001014;4.08e-10;2!CL:0001016;4.08e-10;2!CL:0002327;1.09e-09;4!CL:0000575;3.60e-09;2!CL:0000150;1.42e-07;9!CL:0002077;4.52e-07;34 | |ontology_enrichment_celltype_v019=CL:0002076;1.63e-30;42!CL:0002251;1.07e-22;20!CL:0002368;6.90e-20;13!CL:0000244;3.23e-18;4!CL:0000731;3.23e-18;4!CL:0002621;8.73e-14;3!CL:0002159;1.00e-13;14!CL:0000307;1.28e-13;3!CL:0000622;1.39e-13;5!CL:0002623;6.41e-13;3!CL:0002202;9.78e-12;9!CL:0002632;9.78e-12;9!CL:0000154;2.46e-11;6!CL:0001014;4.08e-10;2!CL:0001016;4.08e-10;2!CL:0002327;1.09e-09;4!CL:0000575;3.60e-09;2!CL:0000150;1.42e-07;9!CL:0002077;4.52e-07;34 | ||
|ontology_enrichment_celltype_v019_2=CL:0002076,9.59e-39,42;CL:0000223,1.27e-26,58;CL:0002251,1.20e-22,20;CL:0002368,6.51e-20,13;CL:0000244,2.62e-18,4;CL:0000731,2.62e-18,4;CL:0000066,1.08e-17,253;CL:0002621,6.78e-14,3;CL:0000622,7.94e-14,5;CL:0002159,1.11e-13,14;CL:0000068,1.29e-13,3;CL:0000069,1.29e-13,3;CL:0000307,1.29e-13,3;CL:0000377,1.29e-13,3;CL:0002623,3.67e-13,3;CL:0002202,1.00e-11,9;CL:0002632,1.00e-11,9;CL:0000154,1.55e-11,6;CL:0001014,4.37e-10,2;CL:0001016,4.37e-10,2;CL:0002327,7.70e-10,4;CL:0000575,3.84e-09,2;CL:0002077,2.96e-08,34;CL:0002321,7.56e-08,250;CL:0000150,1.05e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000223;1.32e-14;58!CL:0000377;1.28e-13;3 | |ontology_enrichment_development_v019=CL:0000223;1.32e-14;58!CL:0000377;1.28e-13;3 | ||
|ontology_enrichment_disease=DOID:1749!4.46e-13!14 | |ontology_enrichment_disease=DOID:1749!4.46e-13!14 | ||
|ontology_enrichment_disease_v019=DOID:1749;7.46e-07;14 | |ontology_enrichment_disease_v019=DOID:1749;7.46e-07;14 | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000161!9.36e-13!35;UBERON:0000166!1.04e-12!21;UBERON:0001004!1.79e-10!72;UBERON:0000365!2.74e-10!5;UBERON:0000165!3.31e-10!28;UBERON:0000930!3.31e-10!28;UBERON:0003729!3.42e-09!5;UBERON:0003102!4.68e-09!95;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0005910!1.84e-08!6;UBERON:0000974!1.32e-07!10;UBERON:0003343!1.51e-07!4;UBERON:0004785!1.51e-07!4;UBERON:0006554!3.57e-07!44;UBERON:0001949!4.54e-07!3;UBERON:0006562!5.01e-07!11;UBERON:0000062!5.56e-07!511;UBERON:0001008!6.34e-07!45 | |ontology_enrichment_uberon=UBERON:0000161!9.36e-13!35;UBERON:0000166!1.04e-12!21;UBERON:0001004!1.79e-10!72;UBERON:0000365!2.74e-10!5;UBERON:0000165!3.31e-10!28;UBERON:0000930!3.31e-10!28;UBERON:0003729!3.42e-09!5;UBERON:0003102!4.68e-09!95;UBERON:0004119!1.24e-08!169;UBERON:0000925!1.24e-08!169;UBERON:0006595!1.24e-08!169;UBERON:0005910!1.84e-08!6;UBERON:0000974!1.32e-07!10;UBERON:0003343!1.51e-07!4;UBERON:0004785!1.51e-07!4;UBERON:0006554!3.57e-07!44;UBERON:0001949!4.54e-07!3;UBERON:0006562!5.01e-07!11;UBERON:0000062!5.56e-07!511;UBERON:0001008!6.34e-07!45 | ||
|ontology_enrichment_uberon_v019=UBERON:0000486;3.28e-17;12!UBERON:0000161;4.88e-16;19!UBERON:0000166;4.88e-16;19!UBERON:0000165;1.26e-15;28!UBERON:0000365;1.37e-14;5!UBERON:0001949;8.73e-14;3!UBERON:0005910;3.65e-12;6!UBERON:0003729;5.71e-11;13!UBERON:0001911;1.09e-09;4!UBERON:0000344;3.37e-09;20!UBERON:0006562;7.09e-09;2!UBERON:0007811;4.12e-08;52!UBERON:0000033;2.34e-07;50!UBERON:0001555;2.49e-07;54!UBERON:0001041;3.39e-07;14!UBERON:0001444;6.20e-07;48!UBERON:0001004;6.39e-07;65!UBERON:0007196;6.56e-07;15!UBERON:0001558;6.56e-07;15!UBERON:0000153;9.90e-07;54 | |ontology_enrichment_uberon_v019=UBERON:0000486;3.28e-17;12!UBERON:0000161;4.88e-16;19!UBERON:0000166;4.88e-16;19!UBERON:0000165;1.26e-15;28!UBERON:0000365;1.37e-14;5!UBERON:0001949;8.73e-14;3!UBERON:0005910;3.65e-12;6!UBERON:0003729;5.71e-11;13!UBERON:0001911;1.09e-09;4!UBERON:0000344;3.37e-09;20!UBERON:0006562;7.09e-09;2!UBERON:0007811;4.12e-08;52!UBERON:0000033;2.34e-07;50!UBERON:0001555;2.49e-07;54!UBERON:0001041;3.39e-07;14!UBERON:0001444;6.20e-07;48!UBERON:0001004;6.39e-07;65!UBERON:0007196;6.56e-07;15!UBERON:0001558;6.56e-07;15!UBERON:0000153;9.90e-07;54 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000166,4.65e-17,22;UBERON:0000165,4.09e-15,29;UBERON:0000930,4.09e-15,29;UBERON:0000365,1.16e-14,5;UBERON:0001004,4.00e-14,74;UBERON:0000161,4.06e-14,36;UBERON:0001949,6.78e-14,3;UBERON:0004119,7.93e-14,160;UBERON:0000925,7.93e-14,160;UBERON:0006595,7.93e-14,160;UBERON:0000153,2.91e-13,62;UBERON:0007811,2.91e-13,62;UBERON:0000033,3.51e-13,56;UBERON:0005910,3.18e-12,6;UBERON:0003102,5.92e-12,99;UBERON:0001444,1.98e-11,49;UBERON:0003729,6.05e-11,13;UBERON:0001911,7.70e-10,4;UBERON:0005333,7.70e-10,4;UBERON:0008425,7.70e-10,4;UBERON:0005311,7.70e-10,4;UBERON:0000344,3.11e-09,20;UBERON:0001007,1.39e-07,145;UBERON:0001555,1.39e-07,145;UBERON:0007026,1.39e-07,145;UBERON:0007196,6.66e-07,15;UBERON:0001558,6.66e-07,15;UBERON:0001044,8.59e-07,6;UBERON:0003293,8.59e-07,6;UBERON:0003294,8.59e-07,6;UBERON:0010047,8.59e-07,6;UBERON:0000167,8.59e-07,6 | |||
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| ||
|short_description=p9@RGS12 | |short_description=p9@RGS12 | ||
}} | }} |
Latest revision as of 14:16, 17 September 2015
Short description: | p9@RGS12 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RGS12_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000538395_5end |
EntrezGene: | RGS12 |
HGNC: | 9994 |
UniProt: | B7Z764 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endo-epithelial cell | 9.59e-39 | 42 |
endodermal cell | 1.27e-26 | 58 |
epithelial cell of alimentary canal | 1.20e-22 | 20 |
respiratory epithelial cell | 6.51e-20 | 13 |
transitional epithelial cell | 2.62e-18 | 4 |
urothelial cell | 2.62e-18 | 4 |
epithelial cell | 1.08e-17 | 253 |
gingival epithelial cell | 6.78e-14 | 3 |
acinar cell | 7.94e-14 | 5 |
general ecto-epithelial cell | 1.11e-13 | 14 |
duct epithelial cell | 1.29e-13 | 3 |
branched duct epithelial cell | 1.29e-13 | 3 |
tracheal epithelial cell | 1.29e-13 | 3 |
tracheoblast | 1.29e-13 | 3 |
acinar cell of salivary gland | 3.67e-13 | 3 |
epithelial cell of tracheobronchial tree | 1.00e-11 | 9 |
epithelial cell of lower respiratory tract | 1.00e-11 | 9 |
protein secreting cell | 1.55e-11 | 6 |
CD1a-positive Langerhans cell | 4.37e-10 | 2 |
immature CD1a-positive Langerhans cell | 4.37e-10 | 2 |
mammary gland epithelial cell | 7.70e-10 | 4 |
corneal epithelial cell | 3.84e-09 | 2 |
ecto-epithelial cell | 2.96e-08 | 34 |
embryonic cell | 7.56e-08 | 250 |
glandular epithelial cell | 1.05e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
oral opening | 4.65e-17 | 22 |
mouth | 4.09e-15 | 29 |
stomodeum | 4.09e-15 | 29 |
urothelium | 1.16e-14 | 5 |
respiratory system | 4.00e-14 | 74 |
orifice | 4.06e-14 | 36 |
gingival epithelium | 6.78e-14 | 3 |
endoderm-derived structure | 7.93e-14 | 160 |
endoderm | 7.93e-14 | 160 |
presumptive endoderm | 7.93e-14 | 160 |
anterior region of body | 2.91e-13 | 62 |
craniocervical region | 2.91e-13 | 62 |
head | 3.51e-13 | 56 |
transitional epithelium | 3.18e-12 | 6 |
surface structure | 5.92e-12 | 99 |
subdivision of head | 1.98e-11 | 49 |
mouth mucosa | 6.05e-11 | 13 |
mammary gland | 7.70e-10 | 4 |
mammary bud | 7.70e-10 | 4 |
mammary ridge | 7.70e-10 | 4 |
mammary placode | 7.70e-10 | 4 |
mucosa | 3.11e-09 | 20 |
digestive system | 1.39e-07 | 145 |
digestive tract | 1.39e-07 | 145 |
primitive gut | 1.39e-07 | 145 |
tracheobronchial tree | 6.66e-07 | 15 |
lower respiratory tract | 6.66e-07 | 15 |
saliva-secreting gland | 8.59e-07 | 6 |
gland of oral region | 8.59e-07 | 6 |
gland of foregut | 8.59e-07 | 6 |
oral gland | 8.59e-07 | 6 |
oral cavity | 8.59e-07 | 6 |