FFCP PHASE1:Hg19::chr1:203764689..203764700,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9877 | |EntrezGene=9877 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29093 | |HGNC=29093 | ||
|TSSclassifier=strong | |||
|UniProt=O75152 | |UniProt=O75152 | ||
|association_with_transcript=-50bp_to_NM_014827,uc001hac.2_5end | |association_with_transcript=-50bp_to_NM_014827,uc001hac.2_5end | ||
|cluster_id=chr1:203764689..203764700,+ | |||
|description=CAGE_peak_3_at_ZC3H11A_5end | |description=CAGE_peak_3_at_ZC3H11A_5end | ||
|id=chr1:203764689..203764700,+ | |id=chr1:203764689..203764700,+ | ||
|ontology_enrichment_celltype=CL:0000860!3.50e-12!45;CL:0002057!4.59e-12!42;CL:0000766!3.06e-10!76;CL:0000557!5.31e-10!71;CL:0002009!8.84e-10!65;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000839!1.20e-09!70;CL:0002194!2.56e-09!63;CL:0000576!2.56e-09!63;CL:0000040!2.56e-09!63;CL:0000559!2.56e-09!63 | |ontology_enrichment_celltype=CL:0000860!3.50e-12!45;CL:0002057!4.59e-12!42;CL:0000766!3.06e-10!76;CL:0000557!5.31e-10!71;CL:0002009!8.84e-10!65;CL:0000763!1.13e-09!112;CL:0000049!1.13e-09!112;CL:0000839!1.20e-09!70;CL:0002194!2.56e-09!63;CL:0000576!2.56e-09!63;CL:0000040!2.56e-09!63;CL:0000559!2.56e-09!63 | ||
|ontology_enrichment_celltype_v019=CL:0000860;7.32e-20;33!CL:0002057;7.32e-20;33!CL:0000473;3.18e-15;39!CL:0000234;3.18e-15;39!CL:0000775;1.55e-11;3!CL:0000576;6.15e-10;48!CL:0000766;1.30e-09;69!CL:0000081;4.37e-08;11!CL:0000094;1.93e-07;8 | |ontology_enrichment_celltype_v019=CL:0000860;7.32e-20;33!CL:0002057;7.32e-20;33!CL:0000473;3.18e-15;39!CL:0000234;3.18e-15;39!CL:0000775;1.55e-11;3!CL:0000576;6.15e-10;48!CL:0000766;1.30e-09;69!CL:0000081;4.37e-08;11!CL:0000094;1.93e-07;8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,2.58e-17,42;CL:0002057,2.58e-17,42;CL:0000766,8.95e-16,72;CL:0000473,1.17e-14,48;CL:0000234,1.17e-14,48;CL:0000775,9.76e-12,3;CL:0002194,5.86e-11,59;CL:0000576,5.86e-11,59;CL:0000040,5.86e-11,59;CL:0000559,5.86e-11,59;CL:0000839,9.39e-11,66;CL:0000557,1.55e-10,67;CL:0002009,1.75e-10,61;CL:0000763,6.47e-10,108;CL:0000049,6.47e-10,108;CL:0000081,3.76e-08,11;CL:0000738,1.03e-07,136;CL:0000094,1.48e-07,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.76e-14;42 | |ontology_enrichment_development_v019=CL:0002057;1.76e-14;42 | ||
|ontology_enrichment_disease=DOID:162!6.33e-07!235 | |ontology_enrichment_disease=DOID:162!6.33e-07!235 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!5.46e-10!102;UBERON:0003061!5.46e-10!102;UBERON:0002371!2.94e-09!80;UBERON:0002193!1.54e-08!112;UBERON:0001474!1.39e-07!86 | |ontology_enrichment_uberon=UBERON:0002390!5.46e-10!102;UBERON:0003061!5.46e-10!102;UBERON:0002371!2.94e-09!80;UBERON:0002193!1.54e-08!112;UBERON:0001474!1.39e-07!86 | ||
|ontology_enrichment_uberon_v019= | |ontology_enrichment_uberon_v019= | ||
|ontology_enrichment_uberon_v019_2=UBERON:0004765,3.42e-10,90;UBERON:0002371,5.09e-10,76;UBERON:0001474,5.40e-09,82;UBERON:0002390,5.94e-09,98;UBERON:0003061,5.94e-09,98;UBERON:0001434,1.02e-08,100;UBERON:0002193,1.03e-07,108;UBERON:0002405,1.82e-07,93 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.140954404095971,0,0,0,0,0,0,0,0.697801167972428,0,0.791300934685361,0,0.331397375727916,0,0.602694528023977,0.730310090387373,0.487932798790507,0.123121058076788,0,0,0.286235987131057,0,0,0.305653622991805,0.0821005894499457,0.314843125254717,0,0,0,0,0,0,0.232401601740905,0,0.293600439334847,0.553995408531877,0,0,0,0.32389366601898,0.515151135268373,0.726991193897824,0.755751887377619,0.485168122375632,1.16214518452842,1.6446715520873,2.78735733805593,0.575384784644301,0.768482119587302,0.945928919554341,4.48169384957604,3.22742341791913,1.35426486594342,0.564727018627814,0.818718450173537,0.898893937780338,0.612167784741805,2.24650318953266,0.639337125799041,1.31940520074686,0.199463657621632,0.426224750532694,1.16083695451434,2.26954089876456,0.622822248995575,2.00998932205395,1.5644487552606,1.95469960234605,1.21079900526674,1.47311054395026,2.53169909952708,0.211255286311942,0,0,0.112328631146495,0.150176892841506,0,0,0.19891667719909,0.182664153764634,1.75996244461323,0,0,0,0.400395987036012,0,0,0,0,0,0,0,0,0,0,0,0,0.167186495390678,0,0,0,0.111410456885174,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0.113309342697566,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0.201606743224732,0,0,0,0.670700859703636,0,1.0843174571537,0.50133791063589,0.144846518960824,0.795285947051099,0,0,0,0.087834785693126,0.0654895377488563,0.364295288292542,0,0.324547393654683,0,0.132957960518865,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0.33472061276467,0,0,0.24406205754817,0.367663080345869,0.81014194788176,0.0892997282840798,0,0.225222960966644,0,0,0,2.63560834872127,0,0,0,0.12663051166458,0.794455084879313,0.573673241497627,0,0,0,0,0,0.134710672069688,0,0.151357427644931,0,0,0,0,0.149448680551801,0,0.485618833104395,0.280901613404497,0.408308342509787,0,0.413303124703062,0,0,0,0,0,0,0,0,0.30648779579902,0,0.340296549480063,0.179389635688862,0,0.423863802319124,0,0.206105058476878,0.257640540045629,0.18611685633159,0.337552664482532,0.292311015483596,0.504867548488229,0.0920498986422993,0.323292113637624,1.06502877754984,0.302256294682921,0,2.31913023795956,1.63647672354501,0.573609190778008,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0.118306800039844,0.168584690078102,0,0.110293972732394,0.653638332277218,0.949082476444386,0.269662616320329,0.392442930250692,0,0,0,0,0,1.26755034821831,0,0,0,0,0,1.09750285408626,0,0.201057944823262,0.370353780634118,0,0,0,0,0.352226082707465,0,0,0.190254152234598,0.790204397959275,0.858486162094873,0.246217006087397,0.234004265139238,0,0,2.35174979478403,2.55195175036296,0.447792613514241,0.871901815541886,0,0.492663237895943,0.264145302039678,0.414656231081544,0,1.2624243342638,0.063497894292169,0.381988425558278,0,0,0.205654985406647,0.300343057843917,0.571652865261156,0.336393253036082,0.43596006883328,0.07333828582095,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.699810938274399,0,0,0,0.479249710983165,0,1.42636905040718,0.434343920002738,0,0.358121926479791,0,0.591092280605782,0,0,0.254094624222463,0,0,0,0,1.49801404789436,2.99161459204025,4.97298616123243,0,0,0,0,0,0,0.117141414992713,0,0,0,0.664225598535437,0,0.521301686808497,0,0,0,0,0,0.303127571446259,0,0,0.496215615637554,0.460385919864187,0,0,0.511707249066704,0.321707842287215,0,0.154209693802656,0.177561725313127,0.164254312027618,0,0.116210378459959,0,0.802025881213139,0.460404944679482,0.34444334449382,0.182091168006717,0.131124414959424,0,0.0770153371044148,0,0,0,0,0,0.647747748306418,0,0,0,0,0,0,0,0.261435451024901,0,0,0,1.33953315142039,0.183138929636687,0,0.574265537996172,0,1.6068392984416,0,0,0,0.137836572484531,0,0,0.255679882248303,0.267096106940212,0.661139661443912,0.384380134730212,1.78657797492418,0.50578890427775,0,0.31481234683064,0,0.308033580176089,0.532306030317022,0,0.37064843820784,0.286249773483982,0,0,0,0.255897791311334,0,0,0,0.179872457583315,0,0.235624804691373,0.202182481573316,0,0.421258456238981,0,0.731140468893853,0,0,0.282810863907425,0,0,0,0.438450885253763,0,1.31178950409327,0.202910376962704,0,0,0,0,0,0.354761064070598,0,0.658589785919804,0,0,0,0,0,0.753150406214233,0,0,0,0.459446800413919,0.507447609232169,0,0.569647187174163,0.714695326373367,0.411362273086194,1.94541993357815,0.540031437238115,0,0.106824071127473,0,0.735120647943095,0.371606350251437,0.144269212976445,0.142283686696828,0.159426272728822,0.199579371432817,0,0.846694330895531,0.649243880549111,0,0.228234679033192,0.156679895773023,0,0,0.321176150207399,0.605399121573143,0.425846237690326,0,0.307240764308458,0.223676107892416,0.500547425135725,0.586164286206121,0.278406173895242,0,1.35227839237992,0,0,0.37428108081644,0.439524537815682,0.242721043499027,0.222886768554957,0.284136146806413,0.71623345421307,0,0.614321404198464,0,0,0,1.48323486804084,0,0,0,0,0,0.246169610922139,0,0.179736702294654,1.61119057208048,0,0,0,1.11136990144637,0,0.278304294485554,0,0.520855522170466,0.0874599999961957,0.724999575434793,0.1137934482855,0,0,0.344743373241465,0.5832092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| ||
|short_description=p3@ZC3H11A | |short_description=p3@ZC3H11A | ||
}} | }} |
Latest revision as of 23:58, 19 September 2015
Short description: | p3@ZC3H11A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_ZC3H11A_5end |
Coexpression cluster: | NA |
Association with transcript: | -50bp_to_NM_014827, uc001hac.2_5end |
EntrezGene: | ZC3H11A |
HGNC: | 29093 |
UniProt: | O75152 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 2.58e-17 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.58e-17 | 42 |
myeloid leukocyte | 8.95e-16 | 72 |
defensive cell | 1.17e-14 | 48 |
phagocyte | 1.17e-14 | 48 |
neutrophil | 9.76e-12 | 3 |
monopoietic cell | 5.86e-11 | 59 |
monocyte | 5.86e-11 | 59 |
monoblast | 5.86e-11 | 59 |
promonocyte | 5.86e-11 | 59 |
myeloid lineage restricted progenitor cell | 9.39e-11 | 66 |
granulocyte monocyte progenitor cell | 1.55e-10 | 67 |
macrophage dendritic cell progenitor | 1.75e-10 | 61 |
myeloid cell | 6.47e-10 | 108 |
common myeloid progenitor | 6.47e-10 | 108 |
blood cell | 3.76e-08 | 11 |
leukocyte | 1.03e-07 | 136 |
granulocyte | 1.48e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
skeletal element | 3.42e-10 | 90 |
bone marrow | 5.09e-10 | 76 |
bone element | 5.40e-09 | 82 |
hematopoietic system | 5.94e-09 | 98 |
blood island | 5.94e-09 | 98 |
skeletal system | 1.02e-08 | 100 |
hemolymphoid system | 1.03e-07 | 108 |
immune system | 1.82e-07 | 93 |