FFCP PHASE1:Hg19::chr17:56606705..56606717,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5414 | |EntrezGene=5414 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9165 | |HGNC=9165 | ||
|TSSclassifier=strong | |||
|UniProt=O43236 | |UniProt=O43236 | ||
|association_with_transcript=-42bp_to_ENST00000317268,uc002iwm.1,uc002iwn.1_5end | |association_with_transcript=-42bp_to_ENST00000317268,uc002iwm.1,uc002iwn.1_5end | ||
|cluster_id=chr17:56606705..56606717,- | |||
|coexpression_cluster_id=C4 | |coexpression_cluster_id=C4 | ||
|description=CAGE_peak_4_at_SEPT4_5end | |description=CAGE_peak_4_at_SEPT4_5end | ||
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|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |ontology_enrichment_celltype_v019= | ||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;9.37e-21;82!UBERON:0006215;2.89e-13;3!UBERON:0006241;1.29e-12;3!UBERON:0003057;1.29e-12;3!UBERON:0010122;2.46e-09;2 | |ontology_enrichment_development_v019=UBERON:0006601;9.37e-21;82!UBERON:0006215;2.89e-13;3!UBERON:0006241;1.29e-12;3!UBERON:0003057;1.29e-12;3!UBERON:0010122;2.46e-09;2 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.50e-79!115;UBERON:0001049!1.35e-77!57;UBERON:0005068!1.35e-77!57;UBERON:0006241!1.35e-77!57;UBERON:0007135!1.35e-77!57;UBERON:0005743!5.43e-66!86;UBERON:0001017!7.82e-64!82;UBERON:0002616!1.06e-63!59;UBERON:0000073!1.42e-61!94;UBERON:0001016!1.42e-61!94;UBERON:0000955!3.22e-61!69;UBERON:0006238!3.22e-61!69;UBERON:0003075!3.96e-58!86;UBERON:0007284!3.96e-58!86;UBERON:0002346!5.16e-55!90;UBERON:0002780!1.03e-54!41;UBERON:0001890!1.03e-54!41;UBERON:0006240!1.03e-54!41;UBERON:0001893!2.53e-53!34;UBERON:0003080!3.13e-53!42;UBERON:0002020!3.79e-53!34;UBERON:0003528!3.79e-53!34;UBERON:0002791!8.26e-51!33;UBERON:0001869!5.73e-48!32;UBERON:0003056!3.48e-39!61;UBERON:0000153!7.55e-38!129;UBERON:0007811!7.55e-38!129;UBERON:0000033!1.21e-36!123;UBERON:0002619!7.72e-36!22;UBERON:0000956!4.13e-31!25;UBERON:0000203!4.13e-31!25;UBERON:0001950!4.92e-31!20;UBERON:0004121!2.93e-30!169;UBERON:0000924!2.87e-29!173;UBERON:0006601!2.87e-29!173;UBERON:0002308!3.59e-25!9;UBERON:0000125!3.59e-25!9;UBERON:0003076!1.31e-24!15;UBERON:0003057!1.31e-24!15;UBERON:0002420!1.36e-24!9;UBERON:0007245!1.36e-24!9;UBERON:0010009!1.36e-24!9;UBERON:0010011!1.36e-24!9;UBERON:0000454!1.36e-24!9;UBERON:0000025!3.33e-21!194;UBERON:0004732!2.28e-20!13;UBERON:0009663!5.60e-20!7;UBERON:0004733!8.43e-18!12;UBERON:0002028!8.43e-18!12;UBERON:0007277!8.43e-18!12;UBERON:0002298!4.91e-17!8;UBERON:0000200!1.17e-16!6;UBERON:0004111!2.03e-16!241;UBERON:0000477!4.59e-15!286;UBERON:0000064!6.62e-15!219;UBERON:0000349!4.80e-14!5;UBERON:0000483!1.02e-13!309;UBERON:0000119!1.85e-13!312;UBERON:0000475!5.49e-13!365;UBERON:0001871!3.04e-12!7;UBERON:0000369!9.42e-12!4;UBERON:0002435!9.42e-12!4;UBERON:0000204!9.42e-12!4;UBERON:0010082!9.42e-12!4;UBERON:0002680!4.04e-11!9;UBERON:0001895!4.04e-11!9;UBERON:0010092!4.04e-11!9;UBERON:0000062!4.33e-10!511;UBERON:0006331!1.03e-09!3;UBERON:0001872!1.09e-09!5;UBERON:0000988!1.53e-09!3;UBERON:0002771!3.08e-09!3;UBERON:0005383!4.66e-09!3;UBERON:0005382!4.66e-09!3;UBERON:0001896!5.34e-09!3;UBERON:0005290!5.34e-09!3;UBERON:0010096!5.34e-09!3;UBERON:0002240!8.03e-09!3;UBERON:0000481!8.47e-08!347;UBERON:0000922!2.30e-07!612;UBERON:0005162!2.47e-07!2;UBERON:0000122!2.47e-07!2;UBERON:0001897!3.04e-07!2;UBERON:0001875!4.08e-07!2;UBERON:0006514!4.08e-07!2;UBERON:0002148!7.05e-07!2;UBERON:0009662!7.05e-07!2;UBERON:0000467!7.17e-07!625;UBERON:0000480!7.81e-07!626 | |ontology_enrichment_uberon=UBERON:0007023!3.50e-79!115;UBERON:0001049!1.35e-77!57;UBERON:0005068!1.35e-77!57;UBERON:0006241!1.35e-77!57;UBERON:0007135!1.35e-77!57;UBERON:0005743!5.43e-66!86;UBERON:0001017!7.82e-64!82;UBERON:0002616!1.06e-63!59;UBERON:0000073!1.42e-61!94;UBERON:0001016!1.42e-61!94;UBERON:0000955!3.22e-61!69;UBERON:0006238!3.22e-61!69;UBERON:0003075!3.96e-58!86;UBERON:0007284!3.96e-58!86;UBERON:0002346!5.16e-55!90;UBERON:0002780!1.03e-54!41;UBERON:0001890!1.03e-54!41;UBERON:0006240!1.03e-54!41;UBERON:0001893!2.53e-53!34;UBERON:0003080!3.13e-53!42;UBERON:0002020!3.79e-53!34;UBERON:0003528!3.79e-53!34;UBERON:0002791!8.26e-51!33;UBERON:0001869!5.73e-48!32;UBERON:0003056!3.48e-39!61;UBERON:0000153!7.55e-38!129;UBERON:0007811!7.55e-38!129;UBERON:0000033!1.21e-36!123;UBERON:0002619!7.72e-36!22;UBERON:0000956!4.13e-31!25;UBERON:0000203!4.13e-31!25;UBERON:0001950!4.92e-31!20;UBERON:0004121!2.93e-30!169;UBERON:0000924!2.87e-29!173;UBERON:0006601!2.87e-29!173;UBERON:0002308!3.59e-25!9;UBERON:0000125!3.59e-25!9;UBERON:0003076!1.31e-24!15;UBERON:0003057!1.31e-24!15;UBERON:0002420!1.36e-24!9;UBERON:0007245!1.36e-24!9;UBERON:0010009!1.36e-24!9;UBERON:0010011!1.36e-24!9;UBERON:0000454!1.36e-24!9;UBERON:0000025!3.33e-21!194;UBERON:0004732!2.28e-20!13;UBERON:0009663!5.60e-20!7;UBERON:0004733!8.43e-18!12;UBERON:0002028!8.43e-18!12;UBERON:0007277!8.43e-18!12;UBERON:0002298!4.91e-17!8;UBERON:0000200!1.17e-16!6;UBERON:0004111!2.03e-16!241;UBERON:0000477!4.59e-15!286;UBERON:0000064!6.62e-15!219;UBERON:0000349!4.80e-14!5;UBERON:0000483!1.02e-13!309;UBERON:0000119!1.85e-13!312;UBERON:0000475!5.49e-13!365;UBERON:0001871!3.04e-12!7;UBERON:0000369!9.42e-12!4;UBERON:0002435!9.42e-12!4;UBERON:0000204!9.42e-12!4;UBERON:0010082!9.42e-12!4;UBERON:0002680!4.04e-11!9;UBERON:0001895!4.04e-11!9;UBERON:0010092!4.04e-11!9;UBERON:0000062!4.33e-10!511;UBERON:0006331!1.03e-09!3;UBERON:0001872!1.09e-09!5;UBERON:0000988!1.53e-09!3;UBERON:0002771!3.08e-09!3;UBERON:0005383!4.66e-09!3;UBERON:0005382!4.66e-09!3;UBERON:0001896!5.34e-09!3;UBERON:0005290!5.34e-09!3;UBERON:0010096!5.34e-09!3;UBERON:0002240!8.03e-09!3;UBERON:0000481!8.47e-08!347;UBERON:0000922!2.30e-07!612;UBERON:0005162!2.47e-07!2;UBERON:0000122!2.47e-07!2;UBERON:0001897!3.04e-07!2;UBERON:0001875!4.08e-07!2;UBERON:0006514!4.08e-07!2;UBERON:0002148!7.05e-07!2;UBERON:0009662!7.05e-07!2;UBERON:0000467!7.17e-07!625;UBERON:0000480!7.81e-07!626 | ||
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|short_description=p4@SEPT4 | |short_description=p4@SEPT4 | ||
}} | }} |
Latest revision as of 11:55, 16 September 2015
Short description: | p4@SEPT4 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SEPT4_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -42bp_to_ENST00000317268, uc002iwm.1, uc002iwn.1_5end |
EntrezGene: | SEPT4 |
HGNC: | 9165 |
UniProt: | O43236 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data