FFCP PHASE1:Hg19::chr13:75884400..75884416,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr13:75884400..75884416,- | |||
|coexpression_cluster_id=C80 | |coexpression_cluster_id=C80 | ||
|description=CAGE_peak_at_chr13:75884400..75884416,- | |description=CAGE_peak_at_chr13:75884400..75884416,- | ||
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|ontology_enrichment_celltype=CL:0000990!3.54e-25!8;CL:0000451!2.47e-20!10;CL:0000453!1.88e-19!5;CL:0000738!4.49e-15!140;CL:0000840!6.73e-15!5;CL:0001029!6.73e-15!5;CL:0000557!1.34e-14!71;CL:0002031!1.16e-13!124;CL:0002009!4.33e-13!65;CL:0002032!1.08e-11!165;CL:0000837!1.08e-11!165;CL:0000839!1.58e-11!70;CL:0000037!6.29e-11!172;CL:0000566!6.29e-11!172;CL:0000763!6.85e-11!112;CL:0000049!6.85e-11!112;CL:0002194!2.59e-10!63;CL:0000576!2.59e-10!63;CL:0000040!2.59e-10!63;CL:0000559!2.59e-10!63;CL:0000766!2.69e-10!76;CL:0000988!6.12e-10!182;CL:0002087!9.91e-10!119;CL:0001014!7.39e-09!2;CL:0001016!7.39e-09!2;CL:0002057!3.51e-08!42;CL:0000860!1.75e-07!45 | |ontology_enrichment_celltype=CL:0000990!3.54e-25!8;CL:0000451!2.47e-20!10;CL:0000453!1.88e-19!5;CL:0000738!4.49e-15!140;CL:0000840!6.73e-15!5;CL:0001029!6.73e-15!5;CL:0000557!1.34e-14!71;CL:0002031!1.16e-13!124;CL:0002009!4.33e-13!65;CL:0002032!1.08e-11!165;CL:0000837!1.08e-11!165;CL:0000839!1.58e-11!70;CL:0000037!6.29e-11!172;CL:0000566!6.29e-11!172;CL:0000763!6.85e-11!112;CL:0000049!6.85e-11!112;CL:0002194!2.59e-10!63;CL:0000576!2.59e-10!63;CL:0000040!2.59e-10!63;CL:0000559!2.59e-10!63;CL:0000766!2.69e-10!76;CL:0000988!6.12e-10!182;CL:0002087!9.91e-10!119;CL:0001014!7.39e-09!2;CL:0001016!7.39e-09!2;CL:0002057!3.51e-08!42;CL:0000860!1.75e-07!45 | ||
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|ontology_enrichment_celltype_v019_2=CL:0000453,7.63e-54,5;CL:0000990,5.85e-30,8;CL:0000451,1.62e-24,10;CL:0001014,8.70e-23,2;CL:0001016,8.70e-23,2;CL:0000738,4.93e-13,136;CL:0002009,1.31e-12,61;CL:0000763,3.16e-12,108;CL:0000049,3.16e-12,108;CL:0000860,1.57e-11,42;CL:0002057,1.57e-11,42;CL:0000557,2.15e-11,67;CL:0002032,1.08e-10,161;CL:0000837,1.08e-10,161;CL:0000037,3.66e-10,168;CL:0000473,5.24e-10,48;CL:0000234,5.24e-10,48;CL:0000988,1.54e-09,177;CL:0002031,6.50e-09,120;CL:0000840,3.27e-08,5;CL:0001029,3.27e-08,5;CL:0002194,7.19e-08,59;CL:0000576,7.19e-08,59;CL:0000040,7.19e-08,59;CL:0000559,7.19e-08,59;CL:0000839,5.65e-07,66 | |||
|ontology_enrichment_development_v019=CL:0002057;1.58e-08;42 | |ontology_enrichment_development_v019=CL:0002057;1.58e-08;42 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:630;1.47e-11;1!DOID:0050177;1.47e-11;1!DOID:0050427;1.47e-11;1 | |ontology_enrichment_disease_v019=DOID:630;1.47e-11;1!DOID:0050177;1.47e-11;1!DOID:0050427;1.47e-11;1 | ||
|ontology_enrichment_disease_v019_2=DOID:630,1.63e-11,1;DOID:0050177,1.63e-11,1;DOID:0050427,1.63e-11,1 | |||
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|ontology_enrichment_uberon_v019=UBERON:0002370;1.56e-21;2!UBERON:0005058;1.56e-21;2!UBERON:0009113;1.56e-21;2!UBERON:0004177;2.32e-19;5!UBERON:0005057;2.32e-19;5!UBERON:0002372;1.47e-11;1!UBERON:0002171;1.47e-11;1!UBERON:0001961;1.47e-11;1!UBERON:0001744;1.47e-11;1!UBERON:0006518;1.47e-11;1!UBERON:0008949;1.47e-11;1!UBERON:0000101;1.47e-11;1!UBERON:0001042;1.47e-11;1!UBERON:0002167;1.47e-11;1!UBERON:0001735;1.47e-11;1 | |ontology_enrichment_uberon_v019=UBERON:0002370;1.56e-21;2!UBERON:0005058;1.56e-21;2!UBERON:0009113;1.56e-21;2!UBERON:0004177;2.32e-19;5!UBERON:0005057;2.32e-19;5!UBERON:0002372;1.47e-11;1!UBERON:0002171;1.47e-11;1!UBERON:0001961;1.47e-11;1!UBERON:0001744;1.47e-11;1!UBERON:0006518;1.47e-11;1!UBERON:0008949;1.47e-11;1!UBERON:0000101;1.47e-11;1!UBERON:0001042;1.47e-11;1!UBERON:0002167;1.47e-11;1!UBERON:0001735;1.47e-11;1 | ||
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|short_description=p@chr13:75884400..75884416,- | |short_description=p@chr13:75884400..75884416,- | ||
}} | }} |
Latest revision as of 17:05, 24 July 2015
Short description: | p@chr13:75884400..75884416, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr13:75884400..75884416, - |
Coexpression cluster: | C80_immature_migratory_CD14_Dendritic_splenic_cord_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Langerhans cell | 7.63e-54 | 5 |
conventional dendritic cell | 5.85e-30 | 8 |
dendritic cell | 1.62e-24 | 10 |
CD1a-positive Langerhans cell | 8.70e-23 | 2 |
immature CD1a-positive Langerhans cell | 8.70e-23 | 2 |
leukocyte | 4.93e-13 | 136 |
macrophage dendritic cell progenitor | 1.31e-12 | 61 |
myeloid cell | 3.16e-12 | 108 |
common myeloid progenitor | 3.16e-12 | 108 |
classical monocyte | 1.57e-11 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.57e-11 | 42 |
granulocyte monocyte progenitor cell | 2.15e-11 | 67 |
hematopoietic oligopotent progenitor cell | 1.08e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.08e-10 | 161 |
hematopoietic stem cell | 3.66e-10 | 168 |
defensive cell | 5.24e-10 | 48 |
phagocyte | 5.24e-10 | 48 |
hematopoietic cell | 1.54e-09 | 177 |
hematopoietic lineage restricted progenitor cell | 6.50e-09 | 120 |
immature conventional dendritic cell | 3.27e-08 | 5 |
common dendritic progenitor | 3.27e-08 | 5 |
monopoietic cell | 7.19e-08 | 59 |
monocyte | 7.19e-08 | 59 |
monoblast | 7.19e-08 | 59 |
promonocyte | 7.19e-08 | 59 |
myeloid lineage restricted progenitor cell | 5.65e-07 | 66 |
Ontology term | p-value | n |
---|---|---|
immune system | 6.36e-17 | 93 |
hemolymphoid system | 2.49e-14 | 108 |
hemopoietic organ | 4.97e-14 | 7 |
immune organ | 4.97e-14 | 7 |
hematopoietic system | 1.62e-13 | 98 |
blood island | 1.62e-13 | 98 |
tonsil | 1.32e-11 | 1 |
mucosa-associated lymphoid tissue | 1.32e-11 | 1 |
lymphoid tissue | 1.32e-11 | 1 |
tonsillar ring | 1.32e-11 | 1 |
lower lobe of right lung | 1.47e-11 | 1 |
right lung lobe | 1.47e-11 | 1 |
lower lobe of lung | 1.47e-11 | 1 |
lobe of lung | 1.47e-11 | 1 |
right lung | 1.47e-11 | 1 |
thymus | 2.77e-11 | 4 |
hemolymphoid system gland | 2.77e-11 | 4 |
thymic region | 2.77e-11 | 4 |
pharyngeal gland | 2.77e-11 | 4 |
thymus primordium | 2.77e-11 | 4 |
bone marrow | 6.32e-10 | 76 |
chordate pharynx | 7.40e-10 | 10 |
pharyngeal region of foregut | 7.40e-10 | 10 |
bone element | 4.01e-09 | 82 |
pharynx | 5.22e-09 | 11 |
skeletal element | 3.24e-08 | 90 |
pharyngeal epithelium | 8.13e-08 | 6 |
skeletal system | 2.76e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
genetic disease | 1.63e-11 | 1 |
monogenic disease | 1.63e-11 | 1 |
xeroderma pigmentosum | 1.63e-11 | 1 |