FFCP PHASE1:Hg19::chr20:2310953..2310974,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr20:2310953..2310974,+
|short_description=p@chr20:2310953..2310974,+
|description=CAGE_peak_at_chr20:2310953..2310974,+
|association_with_transcript=NA
|Entr...") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr20:2310953..2310974,+ | |||
|coexpression_cluster_id=C2610 | |||
|description=CAGE_peak_at_chr20:2310953..2310974,+ | |||
|id=chr20:2310953..2310974,+ | |||
|ontology_enrichment_celltype=CL:0002057!1.35e-26!42;CL:0000860!2.44e-24!45;CL:0000766!1.56e-21!76;CL:0002194!6.60e-18!63;CL:0000576!6.60e-18!63;CL:0000040!6.60e-18!63;CL:0000559!6.60e-18!63;CL:0000763!1.82e-17!112;CL:0000049!1.82e-17!112;CL:0002009!3.88e-17!65;CL:0000839!2.06e-15!70;CL:0000557!4.27e-15!71;CL:0000738!4.44e-11!140;CL:0002032!4.46e-11!165;CL:0000837!4.46e-11!165;CL:0000037!5.02e-11!172;CL:0000566!5.02e-11!172;CL:0000988!7.23e-10!182;CL:0002087!2.13e-09!119;CL:0000775!9.92e-09!3;CL:0000094!3.45e-08!8;CL:0002031!6.23e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000860;6.38e-34;33!CL:0002057;6.38e-34;33!CL:0000473;2.22e-24;39!CL:0000234;2.22e-24;39!CL:0000576;5.74e-16;48!CL:0000775;7.19e-16;3!CL:0000094;9.83e-16;8!CL:0000081;2.34e-11;11!CL:0000766;2.51e-11;69!CL:0000771;3.13e-11;2!CL:0000763;1.16e-08;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,1.79e-28,42;CL:0002057,1.79e-28,42;CL:0000766,1.41e-26,72;CL:0000473,2.00e-24,48;CL:0000234,2.00e-24,48;CL:0000763,1.52e-21,108;CL:0000049,1.52e-21,108;CL:0002194,9.27e-19,59;CL:0000576,9.27e-19,59;CL:0000040,9.27e-19,59;CL:0000559,9.27e-19,59;CL:0002009,4.98e-18,61;CL:0000839,2.14e-16,66;CL:0000557,4.25e-16,67;CL:0000775,7.20e-16,3;CL:0000094,9.84e-16,8;CL:0000738,1.88e-14,136;CL:0000037,2.54e-14,168;CL:0002032,6.90e-14,161;CL:0000837,6.90e-14,161;CL:0000988,2.72e-13,177;CL:0000081,2.34e-11,11;CL:0000771,3.14e-11,2;CL:0002087,3.26e-10,115;CL:0002031,1.74e-08,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.15e-19;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!6.06e-23!102;UBERON:0003061!6.06e-23!102;UBERON:0002193!2.78e-21!112;UBERON:0000178!6.62e-15!15;UBERON:0000179!6.62e-15!15;UBERON:0000463!6.62e-15!15;UBERON:0002371!1.27e-12!80;UBERON:0001474!2.86e-11!86;UBERON:0002405!7.02e-10!115;UBERON:0004765!1.26e-08!101;UBERON:0001434!1.26e-08!101;UBERON:0003081!9.72e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;8.74e-30;15!UBERON:0000179;8.74e-30;15!UBERON:0000463;8.74e-30;15!UBERON:0002390;4.25e-12;32!UBERON:0002193;6.83e-07;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,7.50e-30,15;UBERON:0000179,7.50e-30,15;UBERON:0000463,7.50e-30,15;UBERON:0002390,1.27e-28,98;UBERON:0003061,1.27e-28,98;UBERON:0002193,1.99e-25,108;UBERON:0002371,9.07e-14,76;UBERON:0001474,1.68e-12,82;UBERON:0004765,4.52e-11,90;UBERON:0003081,9.43e-11,203;UBERON:0002405,1.34e-10,93;UBERON:0001434,1.31e-09,100 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,0.755751887377619,3.88134497900506,1.16214518452842,0,9.91060386864331,1.1507695692886,0,4.7296445977717,3.7922024881028,0.645484683583826,13.5426486594342,0.752969358170419,0.272906150057846,4.94391665779186,2.44867113896722,0,10.2293940127847,0.989553900560148,0.797854630486527,3.40979800426155,1.16083695451434,0,3.11411124497787,2.26123798731069,0,16.5063521975889,0,1.10483290796269,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,46.533631697799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.17949870025,8.97484377612075,39.7838892898594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.53723804616085,3.82318603571188,5.69647187174163,3.09701308095126,4.93634727703433,10.3755729790835,5.94034580961926,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0,0,0,1.70338495076131,0.687010689511529,0.307240764308458,0.223676107892416,0,3.90776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,2.30725423917463,0,0,0,1.0077309914171,0,0,0,0,1.07412704805365,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.307801034015188,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,2.04170325125305,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0.0771741581079447,0,56.9083928597443,0,1.17838273550813,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0.23806443146374,0,0.124149428591716,0,0,0,0.653150243690884,0,0.80822463617505,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.726991193897824,0.755751887377619,3.88134497900506,1.16214518452842,0,9.91060386864331,1.1507695692886,0,4.7296445977717,3.7922024881028,0.645484683583826,13.5426486594342,0.752969358170419,0.272906150057846,4.94391665779186,2.44867113896722,0,10.2293940127847,0.989553900560148,0.797854630486527,3.40979800426155,1.16083695451434,0,3.11411124497787,2.26123798731069,0,16.5063521975889,0,1.10483290796269,6.0127853613768,0,0,0,0,0,0,0,0,0,0,0,0,0.426730222566507,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,23.7204751384914,46.533631697799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,53.17949870025,8.97484377612075,39.7838892898594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50999940573032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,2.53723804616085,3.82318603571188,5.69647187174163,3.09701308095126,4.93634727703433,10.3755729790835,5.94034580961926,5.55187623405989,0,0,0,0,0,0,0,0,0,0,0,0,0,0.156679895773023,2.50634477090067,0,0,0,1.70338495076131,0.687010689511529,0.307240764308458,0.223676107892416,0,3.90776190804081,0,0,0,0,0,0,0.146508179271894,0,0,0,0,0,0,0,0,0,2.30725423917463,0,0,0,1.0077309914171,0,0,0,0,1.07412704805365,0,0.0986434056369336,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.975966209950223,0.307801034015188,0,0,0,0,0.31900115973192,0,0.533034776018635,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0.581934098930517,0,0,0,0,0,0,0,0,0,0.432271251462318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393709926058995,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0.35857467866569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513260513652988,0,0,0,0.414239055347196,0,0,0,0,0,0,0,0,2.04170325125305,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106691729694141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.266107110487916,0,0,0,0,0,0,0.39246546425257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121917924982269,0,0.102662806856247,0,0,0.233939463462106,0,0,0,0,0.301925687133347,0.0771741581079447,0,56.9083928597443,0,1.17838273550813,0,0,0,0,0,0.386747327841463,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.0661699095049,0.23806443146374,0,0.124149428591716,0,0,0,0.653150243690884,0,0.80822463617505,0.502055437748735,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p@chr20:2310953..2310974,+ | |||
}} | }} |
Latest revision as of 12:30, 28 July 2015
Short description: | p@chr20:2310953..2310974, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:2310953..2310974, + |
Coexpression cluster: | C2610_smallcell_Neutrophils_Eosinophils_Whole_CD19_CD14_placenta |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 1.79e-28 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.79e-28 | 42 |
myeloid leukocyte | 1.41e-26 | 72 |
defensive cell | 2.00e-24 | 48 |
phagocyte | 2.00e-24 | 48 |
myeloid cell | 1.52e-21 | 108 |
common myeloid progenitor | 1.52e-21 | 108 |
monopoietic cell | 9.27e-19 | 59 |
monocyte | 9.27e-19 | 59 |
monoblast | 9.27e-19 | 59 |
promonocyte | 9.27e-19 | 59 |
macrophage dendritic cell progenitor | 4.98e-18 | 61 |
myeloid lineage restricted progenitor cell | 2.14e-16 | 66 |
granulocyte monocyte progenitor cell | 4.25e-16 | 67 |
neutrophil | 7.20e-16 | 3 |
granulocyte | 9.84e-16 | 8 |
leukocyte | 1.88e-14 | 136 |
hematopoietic stem cell | 2.54e-14 | 168 |
hematopoietic oligopotent progenitor cell | 6.90e-14 | 161 |
hematopoietic multipotent progenitor cell | 6.90e-14 | 161 |
hematopoietic cell | 2.72e-13 | 177 |
blood cell | 2.34e-11 | 11 |
eosinophil | 3.14e-11 | 2 |
nongranular leukocyte | 3.26e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 1.74e-08 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 7.50e-30 | 15 |
haemolymphatic fluid | 7.50e-30 | 15 |
organism substance | 7.50e-30 | 15 |
hematopoietic system | 1.27e-28 | 98 |
blood island | 1.27e-28 | 98 |
hemolymphoid system | 1.99e-25 | 108 |
bone marrow | 9.07e-14 | 76 |
bone element | 1.68e-12 | 82 |
skeletal element | 4.52e-11 | 90 |
lateral plate mesoderm | 9.43e-11 | 203 |
immune system | 1.34e-10 | 93 |
skeletal system | 1.31e-09 | 100 |