FFCP PHASE1:Hg19::chr12:24862558..24862587,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr12:24862558..24862587,+ | |||
|coexpression_cluster_id=C21 | |coexpression_cluster_id=C21 | ||
|description=CAGE_peak_at_chr12:24862558..24862587,+ | |description=CAGE_peak_at_chr12:24862558..24862587,+ | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002057!3.06e-28!42;CL:0000860!2.75e-26!45;CL:0000080!8.04e-20!6;CL:0002194!3.72e-18!63;CL:0000576!3.72e-18!63;CL:0000040!3.72e-18!63;CL:0000559!3.72e-18!63;CL:0002009!1.43e-17!65;CL:0000839!2.98e-16!70;CL:0000557!5.20e-16!71;CL:0000766!6.78e-15!76;CL:0000988!1.34e-13!182;CL:0002087!2.25e-13!119;CL:0002031!8.85e-13!124;CL:0000738!3.73e-11!140;CL:0000763!9.17e-10!112;CL:0000049!9.17e-10!112;CL:0002032!3.07e-09!165;CL:0000837!3.07e-09!165;CL:0000037!8.43e-09!172;CL:0000566!8.43e-09!172 | |ontology_enrichment_celltype=CL:0002057!3.06e-28!42;CL:0000860!2.75e-26!45;CL:0000080!8.04e-20!6;CL:0002194!3.72e-18!63;CL:0000576!3.72e-18!63;CL:0000040!3.72e-18!63;CL:0000559!3.72e-18!63;CL:0002009!1.43e-17!65;CL:0000839!2.98e-16!70;CL:0000557!5.20e-16!71;CL:0000766!6.78e-15!76;CL:0000988!1.34e-13!182;CL:0002087!2.25e-13!119;CL:0002031!8.85e-13!124;CL:0000738!3.73e-11!140;CL:0000763!9.17e-10!112;CL:0000049!9.17e-10!112;CL:0002032!3.07e-09!165;CL:0000837!3.07e-09!165;CL:0000037!8.43e-09!172;CL:0000566!8.43e-09!172 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-15;33!CL:0002057;1.65e-15;33!CL:0000473;3.72e-12;39!CL:0000234;3.72e-12;39!CL:0000576;3.33e-08;48 | |ontology_enrichment_celltype_v019=CL:0000860;1.65e-15;33!CL:0002057;1.65e-15;33!CL:0000473;3.72e-12;39!CL:0000234;3.72e-12;39!CL:0000576;3.33e-08;48 | ||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.41e-13,42;CL:0002057,3.41e-13,42;CL:0000473,1.44e-11,48;CL:0000234,1.44e-11,48;CL:0000988,8.62e-10,177;CL:0002194,2.75e-09,59;CL:0000576,2.75e-09,59;CL:0000040,2.75e-09,59;CL:0000559,2.75e-09,59;CL:0002009,5.43e-09,61;CL:0000839,2.49e-08,66;CL:0000557,3.29e-08,67;CL:0000766,1.18e-07,72;CL:0002087,8.95e-07,115 | |||
|ontology_enrichment_development_v019=CL:0002057;7.77e-08;42 | |ontology_enrichment_development_v019=CL:0002057;7.77e-08;42 | ||
|ontology_enrichment_disease=DOID:0060060!1.83e-13!1;DOID:0060061!1.83e-13!1;DOID:8691!1.83e-13!1 | |ontology_enrichment_disease=DOID:0060060!1.83e-13!1;DOID:0060061!1.83e-13!1;DOID:8691!1.83e-13!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!7.07e-19!102;UBERON:0003061!7.07e-19!102;UBERON:0002193!4.55e-17!112;UBERON:0002371!4.22e-14!80;UBERON:0001474!4.78e-13!86;UBERON:0002331!3.85e-12!10;UBERON:0000358!3.85e-12!10;UBERON:0000307!3.85e-12!10;UBERON:0000091!3.85e-12!10;UBERON:0000087!3.85e-12!10;UBERON:0007806!3.85e-12!10;UBERON:0008780!3.85e-12!10;UBERON:0005728!3.85e-12!10;UBERON:0004765!5.97e-11!101;UBERON:0001434!5.97e-11!101;UBERON:0002405!1.77e-09!115;UBERON:0000178!2.85e-08!15;UBERON:0000179!2.85e-08!15;UBERON:0000463!2.85e-08!15;UBERON:0003081!4.40e-08!216 | |ontology_enrichment_uberon=UBERON:0002390!7.07e-19!102;UBERON:0003061!7.07e-19!102;UBERON:0002193!4.55e-17!112;UBERON:0002371!4.22e-14!80;UBERON:0001474!4.78e-13!86;UBERON:0002331!3.85e-12!10;UBERON:0000358!3.85e-12!10;UBERON:0000307!3.85e-12!10;UBERON:0000091!3.85e-12!10;UBERON:0000087!3.85e-12!10;UBERON:0007806!3.85e-12!10;UBERON:0008780!3.85e-12!10;UBERON:0005728!3.85e-12!10;UBERON:0004765!5.97e-11!101;UBERON:0001434!5.97e-11!101;UBERON:0002405!1.77e-09!115;UBERON:0000178!2.85e-08!15;UBERON:0000179!2.85e-08!15;UBERON:0000463!2.85e-08!15;UBERON:0003081!4.40e-08!216 | ||
|ontology_enrichment_uberon_v019=UBERON:0002331;9.82e-21;10!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000478;4.86e-09;24!UBERON:0002390;5.36e-07;32 | |ontology_enrichment_uberon_v019=UBERON:0002331;9.82e-21;10!UBERON:0000178;4.52e-14;15!UBERON:0000179;4.52e-14;15!UBERON:0000463;4.52e-14;15!UBERON:0000478;4.86e-09;24!UBERON:0002390;5.36e-07;32 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002331,9.82e-21,10;UBERON:0000358,9.82e-21,10;UBERON:0000307,9.82e-21,10;UBERON:0000091,9.82e-21,10;UBERON:0000087,9.82e-21,10;UBERON:0007010,9.82e-21,10;UBERON:0007806,9.82e-21,10;UBERON:0008780,9.82e-21,10;UBERON:0005728,9.82e-21,10;UBERON:0000178,4.52e-14,15;UBERON:0000179,4.52e-14,15;UBERON:0000463,4.52e-14,15;UBERON:0002390,4.85e-14,98;UBERON:0003061,4.85e-14,98;UBERON:0002193,9.81e-13,108;UBERON:0000478,4.86e-09,24;UBERON:0002371,2.92e-07,76;UBERON:0001474,9.67e-07,82 | |||
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|short_description=p@chr12:24862558..24862587,+ | |short_description=p@chr12:24862558..24862587,+ | ||
}} | }} |
Latest revision as of 07:40, 24 July 2015
Short description: | p@chr12:24862558..24862587, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:24862558..24862587, + |
Coexpression cluster: | C21_cord_mycosis_hairy_xeroderma_adult_CD4_anaplastic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.41e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.41e-13 | 42 |
defensive cell | 1.44e-11 | 48 |
phagocyte | 1.44e-11 | 48 |
hematopoietic cell | 8.62e-10 | 177 |
monopoietic cell | 2.75e-09 | 59 |
monocyte | 2.75e-09 | 59 |
monoblast | 2.75e-09 | 59 |
promonocyte | 2.75e-09 | 59 |
macrophage dendritic cell progenitor | 5.43e-09 | 61 |
myeloid lineage restricted progenitor cell | 2.49e-08 | 66 |
granulocyte monocyte progenitor cell | 3.29e-08 | 67 |
myeloid leukocyte | 1.18e-07 | 72 |
nongranular leukocyte | 8.95e-07 | 115 |
Ontology term | p-value | n |
---|---|---|
umbilical cord | 9.82e-21 | 10 |
blastocyst | 9.82e-21 | 10 |
blastula | 9.82e-21 | 10 |
bilaminar disc | 9.82e-21 | 10 |
inner cell mass | 9.82e-21 | 10 |
cleaving embryo | 9.82e-21 | 10 |
connecting stalk | 9.82e-21 | 10 |
inner cell mass derived epiblast | 9.82e-21 | 10 |
extraembryonic mesoderm | 9.82e-21 | 10 |
blood | 4.52e-14 | 15 |
haemolymphatic fluid | 4.52e-14 | 15 |
organism substance | 4.52e-14 | 15 |
hematopoietic system | 4.85e-14 | 98 |
blood island | 4.85e-14 | 98 |
hemolymphoid system | 9.81e-13 | 108 |
extraembryonic structure | 4.86e-09 | 24 |
bone marrow | 2.92e-07 | 76 |
bone element | 9.67e-07 | 82 |