FFCP PHASE1:Hg19::chr19:42192189..42192207,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(5 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1087 | |EntrezGene=1087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1819 | |HGNC=1819 | ||
|TSSclassifier=strong | |||
|UniProt=Q14002,P40199 | |UniProt=Q14002,P40199 | ||
|association_with_transcript=0bp_to_ENST00000338196,ENST00000401731,ENST00000412062_5end | |association_with_transcript=0bp_to_ENST00000338196,ENST00000401731,ENST00000412062_5end | ||
|cluster_id=chr19:42192189..42192207,- | |||
|coexpression_cluster_id=C190 | |coexpression_cluster_id=C190 | ||
|description=CAGE_peak_1_at_CEACAM7_5end | |description=CAGE_peak_1_at_CEACAM7_5end | ||
Line 9: | Line 14: | ||
|ontology_enrichment_celltype=CL:0002231!3.61e-08!3;CL:0002076!9.65e-08!43 | |ontology_enrichment_celltype=CL:0002231!3.61e-08!3;CL:0002076!9.65e-08!43 | ||
|ontology_enrichment_celltype_v019=CL:0002581;1.59e-08;1 | |ontology_enrichment_celltype_v019=CL:0002581;1.59e-08;1 | ||
|ontology_enrichment_celltype_v019_2=CL:0002581,1.42e-08,1 | |||
|ontology_enrichment_development_v019=UBERON:0001045;3.58e-09;1!UBERON:0009143;3.87e-09;1!UBERON:0006242;1.59e-08;1 | |ontology_enrichment_development_v019=UBERON:0001045;3.58e-09;1!UBERON:0009143;3.87e-09;1!UBERON:0006242;1.59e-08;1 | ||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004119!5.90e-16!169;UBERON:0000925!5.90e-16!169;UBERON:0006595!5.90e-16!169;UBERON:0004921!2.32e-13!129;UBERON:0004185!2.32e-13!129;UBERON:0001046!1.82e-11!19;UBERON:0001007!2.32e-11!155;UBERON:0001555!2.32e-11!155;UBERON:0007026!2.32e-11!155;UBERON:0000077!3.11e-11!130;UBERON:0000059!4.16e-11!11;UBERON:0000160!9.00e-09!27;UBERON:0004907!1.88e-08!5;UBERON:0000161!4.66e-08!35;UBERON:0001004!1.17e-07!72;UBERON:0005409!1.73e-07!35;UBERON:0001155!2.20e-07!9;UBERON:0000002!5.82e-07!6;UBERON:0001560!5.82e-07!6;UBERON:0000065!6.04e-07!53 | |ontology_enrichment_uberon=UBERON:0004119!5.90e-16!169;UBERON:0000925!5.90e-16!169;UBERON:0006595!5.90e-16!169;UBERON:0004921!2.32e-13!129;UBERON:0004185!2.32e-13!129;UBERON:0001046!1.82e-11!19;UBERON:0001007!2.32e-11!155;UBERON:0001555!2.32e-11!155;UBERON:0007026!2.32e-11!155;UBERON:0000077!3.11e-11!130;UBERON:0000059!4.16e-11!11;UBERON:0000160!9.00e-09!27;UBERON:0004907!1.88e-08!5;UBERON:0000161!4.66e-08!35;UBERON:0001004!1.17e-07!72;UBERON:0005409!1.73e-07!35;UBERON:0001155!2.20e-07!9;UBERON:0000002!5.82e-07!6;UBERON:0001560!5.82e-07!6;UBERON:0000065!6.04e-07!53 | ||
|ontology_enrichment_uberon_v019=UBERON:0000059;2.38e-17;11!UBERON:0001155;5.87e-14;9!UBERON:0004921;8.94e-13;33!UBERON:0001723;3.44e-11;3!UBERON:0001033;3.44e-11;3!UBERON:0000160;1.57e-10;17!UBERON:0001154;3.58e-09;1!UBERON:0001153;3.58e-09;1!UBERON:0009854;3.58e-09;1!UBERON:0002372;4.18e-09;1!UBERON:0001961;4.18e-09;1!UBERON:0001744;4.18e-09;1!UBERON:0001042;4.18e-09;1!UBERON:0001735;4.18e-09;1!UBERON:0000996;5.28e-09;1!UBERON:0005795;1.59e-08;1!UBERON:0005409;3.42e-08;22!UBERON:0001555;1.89e-07;54!UBERON:0004907;4.58e-07;5 | |ontology_enrichment_uberon_v019=UBERON:0000059;2.38e-17;11!UBERON:0001155;5.87e-14;9!UBERON:0004921;8.94e-13;33!UBERON:0001723;3.44e-11;3!UBERON:0001033;3.44e-11;3!UBERON:0000160;1.57e-10;17!UBERON:0001154;3.58e-09;1!UBERON:0001153;3.58e-09;1!UBERON:0009854;3.58e-09;1!UBERON:0002372;4.18e-09;1!UBERON:0001961;4.18e-09;1!UBERON:0001744;4.18e-09;1!UBERON:0001042;4.18e-09;1!UBERON:0001735;4.18e-09;1!UBERON:0000996;5.28e-09;1!UBERON:0005795;1.59e-08;1!UBERON:0005409;3.42e-08;22!UBERON:0001555;1.89e-07;54!UBERON:0004907;4.58e-07;5 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0000059,2.30e-17,11;UBERON:0001155,5.77e-14,9;UBERON:0004921,2.08e-11,118;UBERON:0001723,3.44e-11,3;UBERON:0001033,3.44e-11,3;UBERON:0010056,3.44e-11,3;UBERON:0000160,1.54e-10,17;UBERON:0004119,3.21e-10,160;UBERON:0000925,3.21e-10,160;UBERON:0006595,3.21e-10,160;UBERON:0001007,3.94e-10,145;UBERON:0001555,3.94e-10,145;UBERON:0007026,3.94e-10,145;UBERON:0001154,3.58e-09,1;UBERON:0001153,3.58e-09,1;UBERON:0001045,3.58e-09,1;UBERON:0002372,4.19e-09,1;UBERON:0001961,4.19e-09,1;UBERON:0001744,4.19e-09,1;UBERON:0001735,4.19e-09,1;UBERON:0000996,5.28e-09,1;UBERON:0007023,1.04e-08,114;UBERON:0001042,1.86e-07,10;UBERON:0009145,1.86e-07,10;UBERON:0005409,3.17e-07,25;UBERON:0004907,4.52e-07,5;UBERON:0000161,5.00e-07,36;UBERON:0006562,8.12e-07,11 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.846016147141356,0.200506470303285,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.50578890427775,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.659006605437454,0,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0,0,0,0,0,0,0,0,0,0,0,0,0,78.7409159263771,0,0,0,0,0,1.07412704805365,0,1.57829449019094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60098356119391,10.9269367075392,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,141.327194213148,3.89213283814692,1080.91232638758,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,24.2472541221049,0,16.0446325954178,0,0,0,0.195551382734803,0,1.28071796843612,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61934462287689,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0.471797825567689,0,0,0,1.73510069962603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0.280272163313789,10.9579046461139,0,0,0.142953088353313,0,0,0,0,0.62164849248911,0,1.38251932362818,0.430227358820278,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,1.27940389140589,0.714193294391221,0,0.0620747142958579,0,0,0,13.4984383696116,17.4538983553493,20.0035597453325,7.67427597701637,0,0.162806537221949,0,0,0,0,0.733448665097199,1.62758471326295,15.3124058062668,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.369754010166788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0654895377488563,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.600182192168805,0.103052529238439,0,0,0,0.0974370051611986,0,0,0,0.355009592516614,0,0,0,0,0,0,0,0,0.10366105501537,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.491953754172454,0,0,0,0,0,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.48418066444991,0,0,0,0,0,0.846016147141356,0.200506470303285,0.736647911487171,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206082023295445,0,0,0,0,0,0,0,0,0,0,0,0,0,0.165284915360978,0.384380134730212,0.127612712494584,0.50578890427775,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.670302275535787,0,0.659006605437454,0,0,0.886860307073351,1.37834040124176,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.36852972734796,0,0,0,0,0,0,0,0,0,0,0,0,0,78.7409159263771,0,0,0,0,0,1.07412704805365,0,1.57829449019094,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.60098356119391,10.9269367075392,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,141.327194213148,3.89213283814692,1080.91232638758,0,0,0,0,0.802577647298789,0,0,0.19566461893209,0,0,1.20990716048664,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0.0870592065804026,0,0,0,0,0,24.2472541221049,0,16.0446325954178,0,0,0,0.195551382734803,0,1.28071796843612,0,0.144090417154106,0,0,0.14405479798815,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.137539436597234,0,0,0,0,0,0.0788057072991982,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.61934462287689,0.704815022316672,0.106787412567695,0.157204305099666,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.228840068396924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.398095888698616,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.303859956177382,0,0,0,0,0,0,0,0,0,0,0,0,0.559518030877778,0,0,0,0.471797825567689,0,0,0,1.73510069962603,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0752103283492573,0,2.34454203369928,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0.620916591138472,0,0,0,0,0,0,0,0,0.280272163313789,10.9579046461139,0,0,0.142953088353313,0,0,0,0,0.62164849248911,0,1.38251932362818,0.430227358820278,0,0,0,0,0,0,0,0,0.243835849964539,0,0,0,0,0.467878926924211,0,0,0,0,0,0.0771741581079447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.26721740526556,0.0918948995348449,0,0,0,0,0,1.27940389140589,0.714193294391221,0,0.0620747142958579,0,0,0,13.4984383696116,17.4538983553493,20.0035597453325,7.67427597701637,0,0.162806537221949,0,0,0,0,0.733448665097199,1.62758471326295,15.3124058062668,0,0 | ||
|short_description=p1@CEACAM7 | |short_description=p1@CEACAM7 | ||
}} | }} |
Latest revision as of 06:15, 18 September 2015
Short description: | p1@CEACAM7 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CEACAM7_5end |
Coexpression cluster: | C190_colon_small_rectum_duodenum_appendix_temporal_oral |
Association with transcript: | 0bp_to_ENST00000338196, ENST00000401731, ENST00000412062_5end |
EntrezGene: | CEACAM7 |
HGNC: | 1819 |
UniProt: | Q14002P40199 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
perirenal preadipocyte | 1.42e-08 | 1 |
Ontology term | p-value | n |
---|---|---|
large intestine | 2.30e-17 | 11 |
colon | 5.77e-14 | 9 |
subdivision of digestive tract | 2.08e-11 | 118 |
tongue | 3.44e-11 | 3 |
gustatory system | 3.44e-11 | 3 |
future tongue | 3.44e-11 | 3 |
intestine | 1.54e-10 | 17 |
endoderm-derived structure | 3.21e-10 | 160 |
endoderm | 3.21e-10 | 160 |
presumptive endoderm | 3.21e-10 | 160 |
digestive system | 3.94e-10 | 145 |
digestive tract | 3.94e-10 | 145 |
primitive gut | 3.94e-10 | 145 |
vermiform appendix | 3.58e-09 | 1 |
caecum | 3.58e-09 | 1 |
midgut | 3.58e-09 | 1 |
tonsil | 4.19e-09 | 1 |
mucosa-associated lymphoid tissue | 4.19e-09 | 1 |
lymphoid tissue | 4.19e-09 | 1 |
tonsillar ring | 4.19e-09 | 1 |
vagina | 5.28e-09 | 1 |
adult organism | 1.04e-08 | 114 |
chordate pharynx | 1.86e-07 | 10 |
pharyngeal region of foregut | 1.86e-07 | 10 |
gastrointestinal system | 3.17e-07 | 25 |
lower digestive tract | 4.52e-07 | 5 |
orifice | 5.00e-07 | 36 |
pharynx | 8.12e-07 | 11 |