FFCP PHASE1:Hg19::chr17:58247977..58247984,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr17:58247977..58247984,- | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_at_chr17:58247977..58247984,- | |description=CAGE_peak_at_chr17:58247977..58247984,- | ||
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|ontology_enrichment_celltype=CL:0000081!5.81e-20!11;CL:0000775!3.86e-19!3;CL:0000094!6.02e-16!8;CL:0000771!3.82e-08!2 | |ontology_enrichment_celltype=CL:0000081!5.81e-20!11;CL:0000775!3.86e-19!3;CL:0000094!6.02e-16!8;CL:0000771!3.82e-08!2 | ||
|ontology_enrichment_celltype_v019=CL:0000775;2.40e-66;3!CL:0000094;4.57e-56;8!CL:0000081;4.07e-41;11!CL:0000771;5.56e-26;2!CL:0002188;3.60e-11;5!CL:1000746;2.35e-08;7!CL:1000612;2.35e-08;7 | |ontology_enrichment_celltype_v019=CL:0000775;2.40e-66;3!CL:0000094;4.57e-56;8!CL:0000081;4.07e-41;11!CL:0000771;5.56e-26;2!CL:0002188;3.60e-11;5!CL:1000746;2.35e-08;7!CL:1000612;2.35e-08;7 | ||
|ontology_enrichment_celltype_v019_2=CL:0000775,2.40e-66,3;CL:0000094,4.57e-56,8;CL:0000081,4.07e-41,11;CL:0000771,5.56e-26,2;CL:0002188,3.60e-11,5;CL:1000746,2.35e-08,7;CL:1000612,2.35e-08,7;CL:0000766,5.36e-07,72 | |||
|ontology_enrichment_development_v019= | |ontology_enrichment_development_v019= | ||
|ontology_enrichment_disease=DOID:4960!1.61e-14!1;DOID:0070004!1.61e-14!1 | |ontology_enrichment_disease=DOID:4960!1.61e-14!1;DOID:0070004!1.61e-14!1 | ||
|ontology_enrichment_disease_v019= | |ontology_enrichment_disease_v019= | ||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002022!3.15e-14!1;UBERON:0001954!7.03e-08!2;UBERON:0003022!7.03e-08!2;UBERON:0002421!7.03e-08!2;UBERON:0002600!7.03e-08!2 | |ontology_enrichment_uberon=UBERON:0002022!3.15e-14!1;UBERON:0001954!7.03e-08!2;UBERON:0003022!7.03e-08!2;UBERON:0002421!7.03e-08!2;UBERON:0002600!7.03e-08!2 | ||
|ontology_enrichment_uberon_v019=UBERON:0000074;2.35e-08;7!UBERON:0001229;2.35e-08;7 | |ontology_enrichment_uberon_v019=UBERON:0000074;2.35e-08;7!UBERON:0001229;2.35e-08;7 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0010532,2.35e-08,7;UBERON:0000074,2.35e-08,7;UBERON:0001229,2.35e-08,7;UBERON:0001230,2.35e-08,7;UBERON:0003220,2.35e-08,7;UBERON:0005749,2.35e-08,7;UBERON:0004199,2.35e-08,7;UBERON:0004209,2.35e-08,7;UBERON:0004198,2.35e-08,7;UBERON:0005103,1.80e-07,8;UBERON:0000083,1.80e-07,8;UBERON:0009201,1.80e-07,8;UBERON:0006553,1.80e-07,8;UBERON:0003074,1.80e-07,8;UBERON:0003060,1.80e-07,8;UBERON:0000080,8.85e-07,9;UBERON:0002120,8.85e-07,9;UBERON:0004875,8.85e-07,9;UBERON:0005721,8.85e-07,9;UBERON:0005754,8.85e-07,9;UBERON:0007297,8.85e-07,9 | |||
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|short_description=p@chr17:58247977..58247984,- | |short_description=p@chr17:58247977..58247984,- | ||
}} | }} |
Latest revision as of 19:32, 25 July 2015
Short description: | p@chr17:58247977..58247984, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr17:58247977..58247984, - |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neutrophil | 2.40e-66 | 3 |
granulocyte | 4.57e-56 | 8 |
blood cell | 4.07e-41 | 11 |
eosinophil | 5.56e-26 | 2 |
glomerular endothelial cell | 3.60e-11 | 5 |
glomerular cell | 2.35e-08 | 7 |
kidney corpuscule cell | 2.35e-08 | 7 |
myeloid leukocyte | 5.36e-07 | 72 |
Ontology term | p-value | n |
---|---|---|
primitive nephron | 2.35e-08 | 7 |
renal glomerulus | 2.35e-08 | 7 |
renal corpuscle | 2.35e-08 | 7 |
glomerular capsule | 2.35e-08 | 7 |
metanephric mesenchyme | 2.35e-08 | 7 |
glomerular tuft | 2.35e-08 | 7 |
S-shaped body | 2.35e-08 | 7 |
renal vesicle | 2.35e-08 | 7 |
comma-shaped body | 2.35e-08 | 7 |
mesonephric epithelium | 1.80e-07 | 8 |
mesonephric tubule | 1.80e-07 | 8 |
nephric duct | 1.80e-07 | 8 |
renal duct | 1.80e-07 | 8 |
mesonephric duct | 1.80e-07 | 8 |
pronephric duct | 1.80e-07 | 8 |
mesonephros | 8.85e-07 | 9 |
pronephros | 8.85e-07 | 9 |
nephrogenic cord | 8.85e-07 | 9 |
pronephric mesoderm | 8.85e-07 | 9 |
rostral part of nephrogenic cord | 8.85e-07 | 9 |
presumptive pronephric mesoderm | 8.85e-07 | 9 |