FFCP PHASE1:Mm9::chr7:31208285..31208312,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=NA | |||
|DPIdataset=NA | |||
|EntrezGene=243910 | |EntrezGene=243910 | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=7 | |MCL_coexpression_id=7 | ||
|TSSclassifier=NA | |||
|UniProt=Q2TB02 | |UniProt=Q2TB02 | ||
|association_with_transcript=0bp_to_ENSMUST00000046177_5end | |association_with_transcript=0bp_to_ENSMUST00000046177_5end | ||
|cluster_id=chr7:31208285..31208312,+ | |||
|description=CAGE_peak_3_at_Nfkbid_5end | |description=CAGE_peak_3_at_Nfkbid_5end | ||
|id=chr7:31208285..31208312,+ | |id=chr7:31208285..31208312,+ | ||
|ontology_enrichment_celltype=CL:0000988!4.88e-12!32;CL:0002032!4.88e-12!32;CL:0000037!4.88e-12!32;CL:0000566!4.88e-12!32;CL:0000837!4.88e-12!32;CL:0000738!4.98e-12!17;CL:0002087!4.98e-12!17;CL:0000838!6.81e-10!12;CL:0000542!1.19e-09!13;CL:0000051!1.19e-09!13;CL:0000084!3.28e-09!11;CL:0000827!3.28e-09!11;CL:0002031!7.41e-09!25;CL:0000791!3.28e-08!9;CL:0000789!3.28e-08!9;CL:0002420!3.28e-08!9;CL:0002419!3.28e-08!9;CL:0000790!3.28e-08!9;CL:0002320!4.95e-08!46;CL:0000134!4.95e-08!46;CL:0000624!1.67e-07!8 | |ontology_enrichment_celltype=CL:0000988!4.88e-12!32;CL:0002032!4.88e-12!32;CL:0000037!4.88e-12!32;CL:0000566!4.88e-12!32;CL:0000837!4.88e-12!32;CL:0000738!4.98e-12!17;CL:0002087!4.98e-12!17;CL:0000838!6.81e-10!12;CL:0000542!1.19e-09!13;CL:0000051!1.19e-09!13;CL:0000084!3.28e-09!11;CL:0000827!3.28e-09!11;CL:0002031!7.41e-09!25;CL:0000791!3.28e-08!9;CL:0000789!3.28e-08!9;CL:0002420!3.28e-08!9;CL:0002419!3.28e-08!9;CL:0000790!3.28e-08!9;CL:0002320!4.95e-08!46;CL:0000134!4.95e-08!46;CL:0000624!1.67e-07!8 | ||
|ontology_enrichment_celltype_v019_2=CL:0000738,7.24e-29,17;CL:0002087,7.24e-29,17;CL:0000988,1.68e-27,32;CL:0002032,1.68e-27,32;CL:0000037,1.68e-27,32;CL:0000837,1.68e-27,32;CL:0002320,8.74e-24,46;CL:0000134,8.74e-24,46;CL:0002031,1.25e-23,25;CL:0000838,1.58e-23,12;CL:0000791,3.49e-22,9;CL:0000789,3.49e-22,9;CL:0002420,3.49e-22,9;CL:0002419,3.49e-22,9;CL:0000790,3.49e-22,9;CL:0000542,1.61e-21,13;CL:0000051,1.61e-21,13;CL:0000084,2.03e-21,11;CL:0000827,2.03e-21,11;CL:0000624,5.40e-20,8;CL:0000219,2.12e-19,54;CL:0000893,2.50e-15,6;CL:0002489,2.50e-15,6;CL:0000898,2.50e-15,6;CL:0000809,2.50e-15,6;CL:0000810,2.50e-15,6;CL:0000895,2.50e-15,6;CL:0000808,2.50e-15,6;CL:0000894,2.50e-15,6;CL:0000806,2.50e-15,6;CL:0000807,2.50e-15,6;CL:0000805,2.50e-15,6;CL:0002425,2.50e-15,6;CL:0002436,2.50e-15,6;CL:0002427,2.50e-15,6;CL:0002428,2.50e-15,6;CL:0002429,2.50e-15,6;CL:0002433,2.50e-15,6;CL:0002431,2.50e-15,6;CL:0002432,2.50e-15,6;CL:0000034,2.87e-15,97;CL:0000723,1.58e-12,91;CL:0000048,1.58e-12,91;CL:0000049,2.00e-09,19;CL:0002194,9.66e-09,4;CL:0000766,9.66e-09,4;CL:0000234,9.66e-09,4;CL:0000576,9.66e-09,4;CL:0000235,9.66e-09,4;CL:0000864,9.66e-09,4;CL:0002009,9.66e-09,4;CL:0000040,9.66e-09,4;CL:0000559,9.66e-09,4;CL:0000557,2.82e-07,7 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019_2=DOID:0060100,1.88e-07,3;DOID:4045,1.88e-07,3 | |||
|ontology_enrichment_uberon=UBERON:0002390!8.28e-15!45;UBERON:0003061!8.28e-15!45;UBERON:0002193!5.92e-14!48;UBERON:0004177!3.17e-09!29;UBERON:0003081!4.27e-09!88;UBERON:0001474!4.77e-08!22;UBERON:0004765!4.77e-08!22;UBERON:0001434!4.77e-08!22;UBERON:0002384!4.95e-08!46;UBERON:0002405!5.79e-08!70;UBERON:0002370!3.05e-07!23;UBERON:0000974!3.05e-07!23;UBERON:0004807!3.05e-07!23;UBERON:0005058!3.05e-07!23;UBERON:0003351!3.05e-07!23;UBERON:0009113!3.05e-07!23;UBERON:0003295!3.05e-07!23;UBERON:0009722!3.05e-07!23;UBERON:0005562!3.05e-07!23;UBERON:0007690!3.05e-07!23 | |ontology_enrichment_uberon=UBERON:0002390!8.28e-15!45;UBERON:0003061!8.28e-15!45;UBERON:0002193!5.92e-14!48;UBERON:0004177!3.17e-09!29;UBERON:0003081!4.27e-09!88;UBERON:0001474!4.77e-08!22;UBERON:0004765!4.77e-08!22;UBERON:0001434!4.77e-08!22;UBERON:0002384!4.95e-08!46;UBERON:0002405!5.79e-08!70;UBERON:0002370!3.05e-07!23;UBERON:0000974!3.05e-07!23;UBERON:0004807!3.05e-07!23;UBERON:0005058!3.05e-07!23;UBERON:0003351!3.05e-07!23;UBERON:0009113!3.05e-07!23;UBERON:0003295!3.05e-07!23;UBERON:0009722!3.05e-07!23;UBERON:0005562!3.05e-07!23;UBERON:0007690!3.05e-07!23 | ||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,8.74e-24,46;UBERON:0002193,3.52e-14,48;UBERON:0002405,3.52e-14,48;UBERON:0002390,9.06e-14,45;UBERON:0003061,9.06e-14,45;UBERON:0002371,3.23e-09,16;UBERON:0002370,1.61e-08,23;UBERON:0000974,1.61e-08,23;UBERON:0004807,1.61e-08,23;UBERON:0005058,1.61e-08,23;UBERON:0003351,1.61e-08,23;UBERON:0009113,1.61e-08,23;UBERON:0003295,1.61e-08,23;UBERON:0009722,1.61e-08,23;UBERON:0005562,1.61e-08,23;UBERON:0007690,1.61e-08,23;UBERON:0006562,4.42e-08,24;UBERON:0003408,4.42e-08,24;UBERON:0001557,4.42e-08,24;UBERON:0001042,4.42e-08,24;UBERON:0008814,4.42e-08,24;UBERON:0009145,4.42e-08,24;UBERON:0002204,2.79e-07,32;UBERON:0000072,5.80e-07,27 | |||
|phase1_expression=0.640595388419176,0,0,0,0,0,0,12.1375924035082,283.970852579912,257.705043480515,8.38968044304974,11.7265073723145,11.641649635322,16.6972968620285,0.333109761815663,0,0,1.10411757875383,2.19383093769182,0.42438965179803,0.255129870453209,0.992909512008853,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,10.0447591376858,6.2506827561904,1.57057123192139,11.1763982725893,6.83045484958446,14.0798002379035,0,0,0,0,0,0,0,0,0,8.22134769682908,30.4652099644765,11.0910953717013,0,0,0,0,0.528990979272033,0.633831403506179,0,0,3.1496490104849,0.988866362566974,4.9733608046227,1.49800055259202,1.92109152660777,0.311068836925433,0,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0,0,0.605809546665472,0,3.47837386442013,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,2.07150306917737,0.29688427812965,0.173485326766136,0.913396434936424,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,6.4700167233197,4.79922184794726,3.04968544975355,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0.702213187313235,1.02939162845886,0.568326998791185,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0,0,0.656669856316381,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,1.24815069245824,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.472905432318573,0.8858587585951,0.318909537314974,0.655453258862952,0.172684981865896,0.433947175744535,3.01582567878545,2.71952841909355,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0,0,0,0.18542530201051,0.341741761595705,0.412773735926445,0.555583582109135,0.565105371014073,0.546776910884101,0.457556346413045,9.85874893964361,23.9316983473455,13.4053974590291,0,0,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.209718688851422,0,0,2.8441000856536,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.993406773906324,0.841368146639782,0.886137163047463,0.605798699688886,0.762068066549998,0.907435666231565,1.75424185331554,1.53938946624527,1.8700304349051,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.952587382566147,0,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.355905054372522,0,0,0.309873682371932,0,0,0.233931608445408,0,0,0.220591419119515,0.695603506861264 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|phase1_expression=0.640595388419176,0,0,0,0,0,0,12.1375924035082,283.970852579912,257.705043480515,8.38968044304974,11.7265073723145,11.641649635322,16.6972968620285,0.333109761815663,0,0,1.10411757875383,2.19383093769182,0.42438965179803,0.255129870453209,0.992909512008853,1.30599894569468,0,0,0,0,0,0,0,0,0,0,0,0.288851619751275,0,0.204169356262369,10.0447591376858,6.2506827561904,1.57057123192139,11.1763982725893,6.83045484958446,14.0798002379035,0,0,0,0,0,0,0,0,0,8.22134769682908,30.4652099644765,11.0910953717013,0,0,0,0,0.528990979272033,0.633831403506179,0,0,3.1496490104849,0.988866362566974,4.9733608046227,1.49800055259202,1.92109152660777,0.311068836925433,0,0,0,0.220868540951614,0.244981598429908,0.191690942036473,0,0,0.255374676170375,0,0,0,0,0,0,0.15279824777681,0,0,0,0.605809546665472,0,3.47837386442013,0,0,0,0,0,0.280888840263504,0,0,0,0.281686839553361,0,0,0,0.216491041011214,0,0,0.22836775943812,2.07150306917737,0.29688427812965,0.173485326766136,0.913396434936424,0,0,0,0,0,0,0.884610551949874,0.161766849947409,0.441683036920787,0.484875253135222,0,0,0,0,6.4700167233197,4.79922184794726,3.04968544975355,0.149790639404823,0.457500602818626,0.125654352112864,0,0,0,0.162241263067758,0.101839363850316,0.373220911830279,0,0.210441855886474,0,0,0,0.150704817835715,0.136072998302656,0.2562274405697,0,0,0.215567992932842,0,0,0,0.278047249225598,0.348252166522167,0.205782136407943,0.398068533636986,0.702213187313235,1.02939162845886,0.568326998791185,0.414251545071004,0.234526059981096,0.36012412292203,0.23674473558521,0.393528463494808,0,0,0.268273401399619,0,0,0.656669856316381,0.162137619091711,0,0.219550115291051,0,0.420579897128254,0.102904612379284,0.330418782983798,0,0.213288250535234,0,0.128867461322093,0.201683524623343,0,0.190225626112559,0.474529061544512,0,0.251335208800269,0.198956472041151,0.19496408711912,0.898819408654221,0,0,0,0.228497025219458,0,0.203651327845314,0.193952487167626,0.0701358198903186,0.252946148497029,0.147610147979602,0.156998727841375,0.123397163921801,0,0,0,0,0.202860121388503,0,0,0,0.324270453550071,0,1.43768206527355,0.372140947668503,1.24815069245824,0,0,0,0.184753190166605,0.37898282354097,0.488894929326078,0,0.234690248288502,0.167506257441816,0,0,0.472905432318573,0.8858587585951,0.318909537314974,0.655453258862952,0.172684981865896,0.433947175744535,3.01582567878545,2.71952841909355,0,0.275936746304732,0,0.117211686592203,0,0,0,0,0,0,0,0,0,0,0,0,0.283880170416537,0.35613120733451,0.162886959353576,0.329940245945071,0,0,0.302323556964751,0,0,0.307435147943927,0.516856586336442,0,0,0.632073515871632,0,0,0,0,0,0.214337035031592,0,0.356737635204141,0,0,0.23467170806371,0,0.220528398054962,0.32977250588296,0,0.180938774784468,0,0,0,0.18542530201051,0.341741761595705,0.412773735926445,0.555583582109135,0.565105371014073,0.546776910884101,0.457556346413045,9.85874893964361,23.9316983473455,13.4053974590291,0,0,0.203319467126849,0.324016022465404,0,0,0,0.0826534557253359,0,0.129614973291793,0,0,0,0.165458490457098,0.194451188344048,0.129159823477731,0,0,0.13020438484395,0.209718688851422,0,0,2.8441000856536,0.202725215290164,0.102710957164827,0.129920822977795,0.179026695667481,0.993406773906324,0.841368146639782,0.886137163047463,0.605798699688886,0.762068066549998,0.907435666231565,1.75424185331554,1.53938946624527,1.8700304349051,0,0,0,0,0.19318959403219,0.187682475451182,0,0.214368379079066,0,0,0,0.572895513439397,0,0,0,0,0,0,0,0.103787347584177,0,0,0.243106717068294,0,0,0.222246727801615,0,0.320919209591815,0,0,0.188626341386076,0.187283014939765,0.128050304809739,0.17230640686684,0.952587382566147,0,0.38581844092741,0.412085900803307,0.294397840268795,0.342869252385415,0,0.238436189947321,0.436039249896986,0.0941093804153306,0.25384382367503,0,0.263069711437843,0,0,0.355905054372522,0,0,0.309873682371932,0,0,0.233931608445408,0,0,0.220591419119515,0.695603506861264 | ||
|short_description=p3@Nfkbid | |short_description=p3@Nfkbid | ||
}} | }} |
Latest revision as of 14:36, 26 September 2015
Short description: | p3@Nfkbid |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_3_at_Nfkbid_5end |
Coexpression cluster: | MCL_coexpression_mm9:7 |
Association with transcript: | 0bp_to_ENSMUST00000046177_5end |
EntrezGene: | Nfkbid |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
connective tissue | 8.74e-24 | 46 |
hemolymphoid system | 3.52e-14 | 48 |
immune system | 3.52e-14 | 48 |
hematopoietic system | 9.06e-14 | 45 |
blood island | 9.06e-14 | 45 |
bone marrow | 3.23e-09 | 16 |
thymus | 1.61e-08 | 23 |
neck | 1.61e-08 | 23 |
respiratory system epithelium | 1.61e-08 | 23 |
hemolymphoid system gland | 1.61e-08 | 23 |
pharyngeal epithelium | 1.61e-08 | 23 |
thymic region | 1.61e-08 | 23 |
pharyngeal gland | 1.61e-08 | 23 |
entire pharyngeal arch endoderm | 1.61e-08 | 23 |
thymus primordium | 1.61e-08 | 23 |
early pharyngeal endoderm | 1.61e-08 | 23 |
pharynx | 4.42e-08 | 24 |
gland of gut | 4.42e-08 | 24 |
upper respiratory tract | 4.42e-08 | 24 |
chordate pharynx | 4.42e-08 | 24 |
pharyngeal arch system | 4.42e-08 | 24 |
pharyngeal region of foregut | 4.42e-08 | 24 |
musculoskeletal system | 2.79e-07 | 32 |
segment of respiratory tract | 5.80e-07 | 27 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system cancer | 1.88e-07 | 3 |
muscle cancer | 1.88e-07 | 3 |