FFCP PHASE1:Hg19::chr2:31361503..31361541,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr2:31361503..31361541,-
|short_description=p4@GALNT14
|description=CAGE_peak_4_at_GALNT14_5end
|association_with_transcript=29bp_to_uc002rnr.2,uc002rns.2,uc01...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=79623 | |EntrezGene=79623 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=22946 | |HGNC=22946 | ||
|TSSclassifier=strong | |||
|UniProt=Q96FL9 | |UniProt=Q96FL9 | ||
|association_with_transcript=29bp_to_uc002rnr.2,uc002rns.2,uc010ezo.1,uc010ymr.1_5end | |||
|cluster_id=chr2:31361503..31361541,- | |||
|coexpression_cluster_id=C1902 | |||
|description=CAGE_peak_4_at_GALNT14_5end | |||
|id=chr2:31361503..31361541,- | |||
|ontology_enrichment_celltype=CL:0000066!5.46e-11!254;CL:1000507!5.53e-09!12;CL:1000494!5.53e-09!12;CL:1000497!7.02e-09!18;CL:0002518!7.02e-09!18;CL:0002076!2.78e-07!43;CL:1000449!3.08e-07!16 | |||
|ontology_enrichment_celltype_v019=CL:1000507;8.30e-37;10!CL:1000494;8.30e-37;10!CL:1000497;8.88e-35;17!CL:0002518;8.88e-35;17!CL:1000449;1.44e-28;15!CL:0002681;8.59e-19;12!CL:0002584;8.59e-19;12!CL:0000239;1.18e-11;3!CL:1000615;1.18e-11;3!CL:0002306;1.18e-11;3!CL:0000650;9.34e-09;2!CL:1000500;9.34e-09;2!CL:1000618;9.34e-09;2!CL:1001318;9.34e-09;2!CL:0002173;9.34e-09;2 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,4.69e-37,10;CL:1000494,4.69e-37,10;CL:1000497,3.29e-35,17;CL:0002518,3.29e-35,17;CL:1000449,6.59e-29,15;CL:0002681,4.41e-19,12;CL:0002584,4.41e-19,12;CL:0000239,7.13e-12,3;CL:1000615,7.13e-12,3;CL:0002306,7.13e-12,3;CL:0000650,8.23e-09,2;CL:1000500,8.23e-09,2;CL:1000618,8.23e-09,2;CL:1001318,8.23e-09,2;CL:0002173,8.23e-09,2;CL:0000066,1.28e-07,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;2.94e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,1.55e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!5.53e-09!12;UBERON:0001231!5.53e-09!12;UBERON:0004810!5.53e-09!12;UBERON:0006554!5.69e-08!44;UBERON:0001008!1.31e-07!45;UBERON:0004211!3.08e-07!16;UBERON:0001285!3.08e-07!16;UBERON:0007684!3.08e-07!16;UBERON:0003220!3.08e-07!16;UBERON:0004208!3.08e-07!16;UBERON:0002113!4.81e-07!27;UBERON:0003918!4.81e-07!27;UBERON:0005095!4.81e-07!27;UBERON:0007687!4.81e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;8.30e-37;10!UBERON:0009773;8.30e-37;10!UBERON:0001231;8.30e-37;10!UBERON:0004810;8.30e-37;10!UBERON:0006554;8.68e-32;30!UBERON:0001008;8.68e-32;30!UBERON:0002113;1.81e-31;24!UBERON:0011143;1.81e-31;24!UBERON:0000489;4.42e-29;29!UBERON:0006555;1.44e-28;15!UBERON:0004819;1.44e-28;15!UBERON:0001285;1.44e-28;15!UBERON:0007684;1.44e-28;15!UBERON:0001225;8.59e-19;12!UBERON:0008987;8.59e-19;12!UBERON:0000353;1.80e-18;15!UBERON:0001851;9.49e-15;15!UBERON:0006853;1.18e-11;3!UBERON:0007685;1.18e-11;3!UBERON:0004134;1.18e-11;3!UBERON:0005172;5.59e-10;52!UBERON:0005173;5.59e-10;52!UBERON:0002417;1.96e-09;58!UBERON:0000916;1.96e-09;58!UBERON:0003567;9.34e-09;2!UBERON:0003838;9.34e-09;2!UBERON:0003586;9.34e-09;2!UBERON:0005169;9.34e-09;2!UBERON:0002321;9.34e-09;2!UBERON:0005215;9.34e-09;2!UBERON:0002303;9.34e-09;2!UBERON:0002319;9.34e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,4.69e-37,10;UBERON:0002113,2.65e-29,26;UBERON:0003918,2.65e-29,26;UBERON:0011143,2.65e-29,26;UBERON:0005095,2.65e-29,26;UBERON:0007687,2.65e-29,26;UBERON:0004211,6.59e-29,15;UBERON:0009773,6.59e-29,15;UBERON:0001231,6.59e-29,15;UBERON:0001285,6.59e-29,15;UBERON:0007684,6.59e-29,15;UBERON:0004208,6.59e-29,15;UBERON:0000489,2.05e-27,31;UBERON:0006555,6.08e-27,16;UBERON:0004819,6.08e-27,16;UBERON:0001225,4.41e-19,12;UBERON:0008987,4.41e-19,12;UBERON:0006554,4.96e-19,47;UBERON:0000353,8.44e-19,15;UBERON:0001008,1.52e-18,48;UBERON:0005172,7.72e-16,54;UBERON:0005173,7.72e-16,54;UBERON:0001851,5.62e-15,15;UBERON:0002417,7.81e-14,60;UBERON:0000916,7.81e-14,60;UBERON:0006853,7.13e-12,3;UBERON:0007685,7.13e-12,3;UBERON:0004134,7.13e-12,3;UBERON:0003103,2.44e-10,68;UBERON:0005177,1.14e-09,101;UBERON:0003567,8.23e-09,2;UBERON:0003838,8.23e-09,2;UBERON:0003586,8.23e-09,2;UBERON:0005169,8.23e-09,2;UBERON:0002321,8.23e-09,2;UBERON:0005215,8.23e-09,2;UBERON:0002303,8.23e-09,2;UBERON:0002319,8.23e-09,2;UBERON:0009569,2.80e-07,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.408001382488506,0,0,0.273748850145768,0.125542639594803,0.382067028739756,0.164201178899891,0.157421562627358,0,0,0,0.919421224478927,1.204823675113,0.369754010166788,0.154934401160603,0.710846162437108,0,0,0,0,0.447830948479849,0.32389366601898,1.03030227053675,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.622822248995575,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0,0.916853528483988,0.728590576585084,0,0,0,0,0.238490624305342,0,0,0,0,0.347140501607594,0,0,0,0,0,0,0,0,0,0,0,0.81014194788176,0.17859945656816,0,0.112611480483322,0,0,0,0,0,0.436094052142534,0,0.12663051166458,0,0,0,0,0,0,0,0,0,0,0,0,0,1.1409436430889,0.149448680551801,0.23486899728753,0.485618833104395,0.140450806702248,0.61246251376468,0.61417158655884,0.516628905878827,0,0.741800787835671,0,0,0.505008341862199,0.625592599359821,0.831192346452549,1.31693286264251,0.30648779579902,0.300476117813194,0,0,0.427114777637135,0,0,0,0,0,0,0,0,0.0920498986422993,1.13152239773168,0,0,0.339121184620975,0.193260853163297,0.545492241181669,1.43402297694502,0.487894824518382,0.265059536642971,0.116193942869518,0,0.252320850875628,0,0,0.643240938192885,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,1.4763109092493,0,0,0,0,0,0.590789906681404,0,0,0,0.109750285408626,0,0.301586917234893,0.555530670951178,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.16798212819886,0.850650583454319,0.626909658919938,0,1.15014803749563,0,0.088048434013226,0.207328115540772,0,0.12624243342638,0,0,0,0,0.205654985406647,0.300343057843917,0.285826432630578,0,0,0,0,0,0,0,0,0.514414748524284,0,1.0656887160644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,0.76228387266739,0,0,0.502548796003046,0.637938751653163,0,0,0,0,0,0,0,0,0.157702415033935,0.585707074963566,0,0,0,0,0.184369168541703,0.347534457872331,0.195801157462741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0.200506470303285,0.552485933615378,0,0,0,4.06079651616671,4.46688955205606,8.62784746094541,8.76835347919564,4.96092655796516,0,0,1.72732732881711,0,2.98041081298238,7.02365683396795,2.80363900349542,1.66215201785745,3.35812132083267,0,0,0,0,0.325378394664303,0.103041011647722,3.47963966309705,3.21787049690293,0,0,0,0.096670718292122,0,0,0.413509717453592,0,0.290033387828457,0.255679882248303,0,0.495854746082934,0.384380134730212,0.127612712494584,0.2023155617111,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0.379473173765715,0.349934720244983,0.577332676353072,0.670302275535787,0,0.0941438007767792,0.43050537267123,0,2.66058092122005,0.918893600827838,0,0,0,0,0,0,0,0,0,0,0.490080431962063,0.185803175125719,0.432807638929335,0,0.159426272728822,0.199579371432817,0,0,0,0.280797178113459,0,0.156679895773023,0,0,0,0,0,0,0,0,0,1.56310476321632,0,0,0,0,0,0.561421621224659,0,0,0,0.284136146806413,0,0,0,0,0.140669416410513,0.222617410045812,2.30725423917463,0,0,0,0.755798243562828,0,0,0.311039587661807,0.359473404589307,0,0,0,0,0,0,0,0,0.260427761085233,1.31189999994294,0,0.568967241427498,0.508507300585533,0,1.03423011972439,0.874813840149763,0.694499979733169,0,0,0,0.110579259931225,0,0,0,0,0,0.569710279235006,0,0,0,0,0,0,0,5.02336820464079,0,0,0,0,0,0,3.79796516150449,1.79556088975062,0,0.649165919226273,0,0.0884575645033392,0,0,0.123563938946503,0.208843899010911,0.202203398942031,0,0.468528891450678,0,0,0,0,0,0.30607276163049,0,0.150323419414493,0,0,1.323967823502,0.627865836814451,0,3.13070500632772,0,0.520679215005393,0.293977192243133,4.96237477508295,0,0,0,0,0,0.678923115418936,0,0,0.959293472527256,0.596143835108969,0.189932387867636,0.195551382734803,1.20238230377301,0.213452994739353,0,0.576361668616424,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223171457441873,0,0,0,0,0,0,0.492137407573744,0,0,0,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.728994679896296,0,1.57611414598396,1.99327434912993,0,0,0.575745591958336,0,0,0,0,0,0,0,0.328370082997356,0,0,0,0,0.129282956361551,0.26446520348538,0.171086837884329,0,0,0.157204305099666,0,0.496166021811951,0.988058159489721,0.243585196761792,1.27668251554036,0,0,0,0,0,0,0.366078794705889,0,0,0,0.124192805882767,1.10678907948985,0,0,0.285465333544967,0.705797459094515,0,0,0,0,0,0,0,0,0,0,0,0,0.159296767163702,0,0,0,0,0,0.150257608997218,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.617602894321944,0,1.23682402162117,0,0,4.61234733458304,0,0.607719912354764,0,0,0,0,0,0.245772908753719,0.211312123358627,0,0.106691729694141,0,0,0,0.419638523158333,0,0.511577485214607,2.69562028491704,0,0.218419276384028,1.3578602396322,0,0.247871528518004,1.67593475391973,0,0.94634094001504,0,4.23211132428821,0,0.256916900385838,1.41696576325585,0,0,0,0.138314504928436,0.161475645631851,0,0,0.825788063434183,0,0,0,2.0710797781803,0.397832444232549,0.0752103283492573,1.0085253435176,0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| ||
|short_description=p4@GALNT14 | |||
}} | }} |
Latest revision as of 22:37, 16 September 2015
Short description: | p4@GALNT14 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_GALNT14_5end |
Coexpression cluster: | C1902_Renal_normal_renal_mesothelioma_clear_epidermoid_kidney |
Association with transcript: | 29bp_to_uc002rnr.2, uc002rns.2, uc010ezo.1, uc010ymr.1_5end |
EntrezGene: | GALNT14 |
HGNC: | 22946 |
UniProt: | Q96FL9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 4.69e-37 | 10 |
nephron tubule epithelial cell | 4.69e-37 | 10 |
kidney cell | 3.29e-35 | 17 |
kidney epithelial cell | 3.29e-35 | 17 |
epithelial cell of nephron | 6.59e-29 | 15 |
kidney cortical cell | 4.41e-19 | 12 |
renal cortical epithelial cell | 4.41e-19 | 12 |
brush border epithelial cell | 7.13e-12 | 3 |
kidney cortex tubule cell | 7.13e-12 | 3 |
epithelial cell of proximal tubule | 7.13e-12 | 3 |
mesangial cell | 8.23e-09 | 2 |
kidney interstitial cell | 8.23e-09 | 2 |
juxtaglomerular complex cell | 8.23e-09 | 2 |
renal interstitial pericyte | 8.23e-09 | 2 |
extraglomerular mesangial cell | 8.23e-09 | 2 |
epithelial cell | 1.28e-07 | 253 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 1.55e-08 | 2 |