FFCP PHASE1:Hg19::chr3:147127489..147127503,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr3:147127489..147127503,+
|short_description=p11@ZIC1
|description=CAGE_peak_11_at_ZIC1_5end
|association_with_transcript=308bp_to_NM_003412,uc003ewe.2_5end
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=7545 | |EntrezGene=7545 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=12872 | |HGNC=12872 | ||
|TSSclassifier=strong | |||
|UniProt=Q15915 | |UniProt=Q15915 | ||
|association_with_transcript=308bp_to_NM_003412,uc003ewe.2_5end | |||
|cluster_id=chr3:147127489..147127503,+ | |||
|coexpression_cluster_id=C4292 | |||
|description=CAGE_peak_11_at_ZIC1_5end | |||
|id=chr3:147127489..147127503,+ | |||
|ontology_enrichment_celltype=CL:0000243!1.50e-18!15;CL:0000125!1.50e-18!15;CL:0000030!1.50e-18!15;CL:0000339!1.50e-18!15;CL:0000095!3.04e-16!17;CL:0000123!3.04e-16!17;CL:0000128!2.67e-15!7;CL:0000126!2.67e-15!7;CL:0000127!2.67e-15!7;CL:0002453!2.67e-15!7;CL:0000333!3.74e-13!41;CL:0000133!6.10e-13!59;CL:0002319!1.83e-12!25;CL:0000221!8.25e-10!71;CL:0002603!2.41e-08!3;CL:0000064!2.53e-08!3;CL:0005012!2.53e-08!3;CL:0000067!2.53e-08!3;CL:0002304!2.53e-08!3;CL:0000708!8.34e-08!3;CL:0002605!3.12e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002603;4.05e-22;3!CL:0000064;8.81e-22;3!CL:0000067;8.81e-22;3!CL:0005012;8.81e-22;3!CL:0002304;8.81e-22;3!CL:0000708;7.36e-21;3!CL:0002575;1.53e-15;2!CL:0002549;7.30e-15;2!CL:0002590;2.15e-10;3!CL:0000128;8.75e-10;7!CL:0000126;8.75e-10;7!CL:0000127;8.75e-10;7!CL:0000075;8.12e-09;27!CL:0000669;3.33e-08;4!CL:0000228;4.25e-08;1!CL:0000222;4.25e-08;1!CL:0002372;4.25e-08;1!CL:0000306;6.04e-08;4!CL:0002222;6.04e-08;4!CL:0002224;6.04e-08;4!CL:0000327;1.50e-07;15!CL:0002321;2.15e-07;15!CL:0000243;8.22e-07;15!CL:0000125;8.22e-07;15 | |||
|ontology_enrichment_celltype_v019_2=CL:0002603,4.06e-22,3;CL:0000064,4.68e-22,3;CL:0000067,4.68e-22,3;CL:0005012,4.68e-22,3;CL:0002304,4.68e-22,3;CL:0000708,1.74e-20,3;CL:0002575,1.54e-15,2;CL:0002549,5.92e-15,2;CL:0000133,8.10e-12,59;CL:0002590,2.15e-10,3;CL:0000128,8.76e-10,7;CL:0000126,8.76e-10,7;CL:0000127,8.76e-10,7;CL:0002453,8.76e-10,7;CL:0000221,2.11e-09,72;CL:0000075,7.84e-09,27;CL:0000669,3.33e-08,4;CL:0000228,3.83e-08,1;CL:0002372,3.83e-08,1;CL:0000306,6.94e-08,4;CL:0002222,6.94e-08,4;CL:0002224,6.94e-08,4;CL:0000327,1.87e-07,15;CL:0000333,5.11e-07,41;CL:0000243,9.10e-07,15;CL:0000125,9.10e-07,15;CL:0000030,9.10e-07,15;CL:0000339,9.10e-07,15 | |||
|ontology_enrichment_development_v019=UBERON:0006215;5.67e-10;3!CL:0000339;8.22e-07;15 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
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| ||
|short_description=p11@ZIC1 | |||
}} | }} |
Latest revision as of 18:52, 15 September 2015
Short description: | p11@ZIC1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_ZIC1_5end |
Coexpression cluster: | C4292_synovial_Pericytes_Astrocyte_Ciliary_Lens_Smooth_Fibroblast |
Association with transcript: | 308bp_to_NM_003412, uc003ewe.2_5end |
EntrezGene: | ZIC1 |
HGNC: | 12872 |
UniProt: | Q15915 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
astrocyte of the cerebellum | 4.06e-22 | 3 |
ciliated cell | 4.68e-22 | 3 |
ciliated epithelial cell | 4.68e-22 | 3 |
multi-ciliated epithelial cell | 4.68e-22 | 3 |
non-pigmented ciliary epithelial cell | 4.68e-22 | 3 |
leptomeningeal cell | 1.74e-20 | 3 |
central nervous system pericyte | 1.54e-15 | 2 |
fibroblast of choroid plexus | 5.92e-15 | 2 |
neurectodermal cell | 8.10e-12 | 59 |
smooth muscle cell of the brain vasculature | 2.15e-10 | 3 |
oligodendrocyte | 8.76e-10 | 7 |
macroglial cell | 8.76e-10 | 7 |
astrocyte | 8.76e-10 | 7 |
oligodendrocyte precursor cell | 8.76e-10 | 7 |
ectodermal cell | 2.11e-09 | 72 |
columnar/cuboidal epithelial cell | 7.84e-09 | 27 |
pericyte cell | 3.33e-08 | 4 |
multinucleate cell | 3.83e-08 | 1 |
myotube | 3.83e-08 | 1 |
crystallin accumulating cell | 6.94e-08 | 4 |
vertebrate lens cell | 6.94e-08 | 4 |
lens epithelial cell | 6.94e-08 | 4 |
extracellular matrix secreting cell | 1.87e-07 | 15 |
migratory neural crest cell | 5.11e-07 | 41 |
glial cell (sensu Vertebrata) | 9.10e-07 | 15 |
glial cell | 9.10e-07 | 15 |
glioblast | 9.10e-07 | 15 |
glioblast (sensu Vertebrata) | 9.10e-07 | 15 |