FFCP PHASE1:Hg19::chr3:69812745..69812760,+: Difference between revisions
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|id=chr3:69812745..69812760,+
|short_description=p10@MITF
|description=CAGE_peak_10_at_MITF_5end
|association_with_transcript=38bp_to_ENST00000472437,NM_001184967,u...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4286 | |EntrezGene=4286 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7105 | |HGNC=7105 | ||
|TSSclassifier=strong | |||
|UniProt=E9PFN0,B4DJL2,O75030 | |UniProt=E9PFN0,B4DJL2,O75030 | ||
|association_with_transcript=38bp_to_ENST00000472437,NM_001184967,uc011bgb.1_5end | |||
|cluster_id=chr3:69812745..69812760,+ | |||
|coexpression_cluster_id=C276 | |||
|description=CAGE_peak_10_at_MITF_5end | |||
|id=chr3:69812745..69812760,+ | |||
|ontology_enrichment_celltype=CL:1000497!1.39e-16!18;CL:0002518!1.39e-16!18;CL:1000507!2.60e-14!12;CL:1000494!2.60e-14!12;CL:1000449!1.41e-10!16;CL:0000239!1.87e-07!3;CL:1000615!1.87e-07!3;CL:0002306!1.87e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:1000497;2.42e-24;17!CL:0002518;2.42e-24;17!CL:1000507;2.07e-15;10!CL:1000494;2.07e-15;10!CL:1000449;1.73e-10;15!CL:0000239;9.64e-07;3!CL:1000615;9.64e-07;3!CL:0002306;9.64e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,1.89e-24,17;CL:0002518,1.89e-24,17;CL:1000507,1.65e-15,10;CL:1000494,1.65e-15,10;CL:1000449,1.50e-10,15;CL:0000239,9.12e-07,3;CL:1000615,9.12e-07,3;CL:0002306,9.12e-07,3 | |||
|ontology_enrichment_development_v019=UBERON:0008425;1.22e-17;1!UBERON:0003918;1.11e-15;10!UBERON:0007687;1.11e-15;10 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:4468;1.71e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.02e-09,2;DOID:7,4.08e-07,39 | |||
|ontology_enrichment_uberon=UBERON:0002113!4.09e-24!27;UBERON:0003918!4.09e-24!27;UBERON:0005095!4.09e-24!27;UBERON:0007687!4.09e-24!27;UBERON:0000489!6.03e-20!32;UBERON:0006554!8.09e-19!44;UBERON:0001008!2.48e-18!45;UBERON:0005172!1.79e-14!55;UBERON:0005173!1.79e-14!55;UBERON:0009773!2.60e-14!12;UBERON:0001231!2.60e-14!12;UBERON:0004810!2.60e-14!12;UBERON:0006555!2.39e-13!17;UBERON:0005103!2.39e-13!17;UBERON:0000083!2.39e-13!17;UBERON:0009201!2.39e-13!17;UBERON:0004819!2.39e-13!17;UBERON:0006553!2.39e-13!17;UBERON:0003074!2.39e-13!17;UBERON:0003060!2.39e-13!17;UBERON:0002417!9.47e-13!61;UBERON:0000916!9.47e-13!61;UBERON:0000080!1.49e-12!18;UBERON:0002120!1.49e-12!18;UBERON:0004875!1.49e-12!18;UBERON:0005721!1.49e-12!18;UBERON:0005754!1.49e-12!18;UBERON:0007297!1.49e-12!18;UBERON:0004876!3.34e-11!20;UBERON:0003064!3.84e-11!37;UBERON:0003103!6.71e-11!69;UBERON:0000058!7.11e-11!26;UBERON:0001954!7.73e-11!2;UBERON:0003022!7.73e-11!2;UBERON:0002421!7.73e-11!2;UBERON:0002600!7.73e-11!2;UBERON:0003887!1.27e-10!21;UBERON:0004211!1.41e-10!16;UBERON:0001285!1.41e-10!16;UBERON:0007684!1.41e-10!16;UBERON:0003220!1.41e-10!16;UBERON:0004208!1.41e-10!16;UBERON:0004175!8.80e-09!25;UBERON:0009569!1.43e-07!113;UBERON:0006853!1.87e-07!3;UBERON:0007685!1.87e-07!3;UBERON:0004134!1.87e-07!3;UBERON:0006947!1.99e-07!3;UBERON:0004054!1.99e-07!3;UBERON:0001851!2.80e-07!16;UBERON:0005177!4.92e-07!107 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.31e-24;24!UBERON:0011143;1.31e-24;24!UBERON:0000489;2.35e-20;29!UBERON:0006554;1.13e-19;30!UBERON:0001008;1.13e-19;30!UBERON:0006834;3.75e-18;1!UBERON:0004211;2.07e-15;10!UBERON:0009773;2.07e-15;10!UBERON:0001231;2.07e-15;10!UBERON:0004810;2.07e-15;10!UBERON:0006555;1.73e-10;15!UBERON:0004819;1.73e-10;15!UBERON:0001285;1.73e-10;15!UBERON:0007684;1.73e-10;15!UBERON:0000995;2.07e-09;17!UBERON:0003975;6.42e-09;18!UBERON:0004175;1.01e-07;21!UBERON:0005172;5.95e-07;52!UBERON:0005173;5.95e-07;52!UBERON:0002417;9.60e-07;58!UBERON:0000916;9.60e-07;58!UBERON:0006853;9.64e-07;3!UBERON:0007685;9.64e-07;3!UBERON:0004134;9.64e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,8.71e-23,26;UBERON:0003918,8.71e-23,26;UBERON:0011143,8.71e-23,26;UBERON:0005095,8.71e-23,26;UBERON:0007687,8.71e-23,26;UBERON:0000489,4.24e-19,31;UBERON:0006834,3.75e-18,1;UBERON:0004810,1.65e-15,10;UBERON:0006554,1.50e-12,47;UBERON:0001008,2.76e-12,48;UBERON:0005172,6.71e-11,54;UBERON:0005173,6.71e-11,54;UBERON:0004211,1.50e-10,15;UBERON:0009773,1.50e-10,15;UBERON:0001231,1.50e-10,15;UBERON:0001285,1.50e-10,15;UBERON:0007684,1.50e-10,15;UBERON:0004208,1.50e-10,15;UBERON:0006555,6.27e-10,16;UBERON:0004819,6.27e-10,16;UBERON:0002417,8.66e-10,60;UBERON:0000916,8.66e-10,60;UBERON:0003103,1.31e-08,68;UBERON:0000995,1.04e-07,21;UBERON:0005795,2.21e-07,22;UBERON:0003975,2.21e-07,22;UBERON:0009569,7.77e-07,112;UBERON:0006853,9.12e-07,3;UBERON:0007685,9.12e-07,3;UBERON:0004134,9.12e-07,3;UBERON:0003100,9.87e-07,41 | |||
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|short_description=p10@MITF | |||
}} | }} |
Latest revision as of 12:11, 19 September 2015
Short description: | p10@MITF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_MITF_5end |
Coexpression cluster: | C276_mesothelioma_kidney_renal_small_clear_cerebellum_Renal |
Association with transcript: | 38bp_to_ENST00000472437, NM_001184967, uc011bgb.1_5end |
EntrezGene: | MITF |
HGNC: | 7105 |
UniProt: | E9PFN0B4DJL2O75030 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 1.89e-24 | 17 |
kidney epithelial cell | 1.89e-24 | 17 |
kidney tubule cell | 1.65e-15 | 10 |
nephron tubule epithelial cell | 1.65e-15 | 10 |
epithelial cell of nephron | 1.50e-10 | 15 |
brush border epithelial cell | 9.12e-07 | 3 |
kidney cortex tubule cell | 9.12e-07 | 3 |
epithelial cell of proximal tubule | 9.12e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
kidney | 8.71e-23 | 26 |
kidney mesenchyme | 8.71e-23 | 26 |
upper urinary tract | 8.71e-23 | 26 |
kidney rudiment | 8.71e-23 | 26 |
kidney field | 8.71e-23 | 26 |
cavitated compound organ | 4.24e-19 | 31 |
uterus or analog | 3.75e-18 | 1 |
nephron tubule epithelium | 1.65e-15 | 10 |
urinary system structure | 1.50e-12 | 47 |
renal system | 2.76e-12 | 48 |
abdomen element | 6.71e-11 | 54 |
abdominal segment element | 6.71e-11 | 54 |
nephron epithelium | 1.50e-10 | 15 |
renal tubule | 1.50e-10 | 15 |
nephron tubule | 1.50e-10 | 15 |
nephron | 1.50e-10 | 15 |
uriniferous tubule | 1.50e-10 | 15 |
nephrogenic mesenchyme | 1.50e-10 | 15 |
excretory tube | 6.27e-10 | 16 |
kidney epithelium | 6.27e-10 | 16 |
abdominal segment of trunk | 8.66e-10 | 60 |
abdomen | 8.66e-10 | 60 |
compound organ | 1.31e-08 | 68 |
uterus | 1.04e-07 | 21 |
embryonic uterus | 2.21e-07 | 22 |
internal female genitalia | 2.21e-07 | 22 |
subdivision of trunk | 7.77e-07 | 112 |
renal cortex tubule | 9.12e-07 | 3 |
region of nephron tubule | 9.12e-07 | 3 |
proximal tubule | 9.12e-07 | 3 |
female organism | 9.87e-07 | 41 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.02e-09 | 2 |
disease of anatomical entity | 4.08e-07 | 39 |