FFCP PHASE1:Hg19::chr1:155180322..155180351,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DPIdataset= | |DHSsupport=supported | ||
|DPIdataset=robust | |||
|EntrezGene=4580 | |EntrezGene=4580 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | ||
|HGNC=7504 | |HGNC=7504 | ||
|TSSclassifier= | |TSSclassifier=strong | ||
|UniProt= | |UniProt= | ||
|association_with_transcript=-287bp_to_ENST00000495589_5end | |association_with_transcript=-287bp_to_ENST00000495589_5end | ||
|cluster_id=chr1:155180322..155180351,+ | |||
|coexpression_cluster_id=C2 | |coexpression_cluster_id=C2 | ||
|description=CAGE_peak_4_at_MTX1_5end | |description=CAGE_peak_4_at_MTX1_5end | ||
Latest revision as of 11:53, 17 September 2015
| Short description: | p4@MTX1 |
|---|---|
| Species: | Human (Homo sapiens) |
| DPI dataset: | Robust |
| TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
| DHS support(Yes/No): | Yes |
| Description: | CAGE_peak_4_at_MTX1_5end |
| Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
| Association with transcript: | -287bp_to_ENST00000495589_5end |
| EntrezGene: | MTX1 |
| HGNC: | 7504 |
| UniProt: | NA |
| Genome view: | ZENBU |
View on UCSC genome browser
Mouse over to see Genome browser image, Click image to go to Genome browser
CAGE Expression
| Sample | p4@MTX1 |
|---|
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- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
| Ontology term | p-value | n |
|---|---|---|
| classical monocyte | 1.09e-99 | 42 |
| CD14-positive, CD16-negative classical monocyte | 1.09e-99 | 42 |
| defensive cell | 6.89e-96 | 48 |
| phagocyte | 6.89e-96 | 48 |
| myeloid leukocyte | 3.91e-95 | 72 |
| monopoietic cell | 8.76e-79 | 59 |
| monocyte | 8.76e-79 | 59 |
| monoblast | 8.76e-79 | 59 |
| promonocyte | 8.76e-79 | 59 |
| macrophage dendritic cell progenitor | 6.42e-76 | 61 |
Showing 1 to 10 of 34 entries
| Ontology term | p-value | n |
|---|---|---|
| hematopoietic system | 1.92e-77 | 98 |
| blood island | 1.92e-77 | 98 |
| hemolymphoid system | 2.81e-69 | 108 |
| bone marrow | 1.87e-62 | 76 |
| bone element | 3.34e-57 | 82 |
| immune system | 5.80e-52 | 93 |
| skeletal element | 2.81e-51 | 90 |
| skeletal system | 3.41e-45 | 100 |
| lateral plate mesoderm | 1.32e-31 | 203 |
| musculoskeletal system | 3.78e-23 | 167 |
Showing 1 to 10 of 17 entries
