FFCP PHASE1:Hg19::chr6:160100686..160100698,-: Difference between revisions
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(Created page with "{{FFCP
|id=chr6:160100686..160100698,-
|short_description=p4@AK093984
|description=CAGE_peak_4_at_AK093984_5end
|association_with_transcript=154bp_to_AK093984_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=154bp_to_AK093984_5end | |||
|cluster_id=chr6:160100686..160100698,- | |||
|coexpression_cluster_id=C954 | |||
|description=CAGE_peak_4_at_AK093984_5end | |||
|id=chr6:160100686..160100698,- | |||
|ontology_enrichment_celltype=CL:0002057!9.96e-25!42;CL:0000860!3.49e-22!45;CL:0000766!2.37e-17!76;CL:0002194!2.38e-16!63;CL:0000576!2.38e-16!63;CL:0000040!2.38e-16!63;CL:0000559!2.38e-16!63;CL:0002009!1.93e-15!65;CL:0000839!3.37e-14!70;CL:0000557!8.14e-14!71;CL:0000763!5.40e-09!112;CL:0000049!5.40e-09!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.40e-56;33!CL:0002057;2.40e-56;33!CL:0000473;3.55e-47;39!CL:0000234;3.55e-47;39!CL:0000576;4.90e-25;48!CL:0000766;5.46e-23;69!CL:0000775;3.45e-13;3!CL:0000763;1.27e-11;100!CL:0002087;1.79e-08;104!CL:0000094;2.10e-08;8 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.12e-53,48;CL:0000234,1.12e-53,48;CL:0000860,1.42e-52,42;CL:0002057,1.42e-52,42;CL:0000766,3.38e-45,72;CL:0002194,1.20e-41,59;CL:0000576,1.20e-41,59;CL:0000040,1.20e-41,59;CL:0000559,1.20e-41,59;CL:0002009,4.29e-40,61;CL:0000839,1.28e-36,66;CL:0000557,5.50e-36,67;CL:0000763,7.17e-28,108;CL:0000049,7.17e-28,108;CL:0000738,1.06e-20,136;CL:0002087,1.88e-18,115;CL:0002031,1.98e-17,120;CL:0002032,2.09e-16,161;CL:0000837,2.09e-16,161;CL:0000037,1.96e-15,168;CL:0000988,2.69e-14,177;CL:0000775,2.13e-13,3;CL:0000094,1.69e-08,8 | |||
|ontology_enrichment_development_v019=CL:0002057;1.48e-39;42!CL:0000049;1.31e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002405!1.30e-11!115;UBERON:0002371!1.52e-11!80;UBERON:0002193!8.23e-11!112;UBERON:0002390!3.24e-10!102;UBERON:0003061!3.24e-10!102;UBERON:0001474!6.98e-10!86;UBERON:0004765!1.31e-09!101;UBERON:0001434!1.31e-09!101;UBERON:0002204!5.40e-09!167;UBERON:0007023!3.06e-08!115 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.02e-31,76;UBERON:0002405,1.46e-28,93;UBERON:0001474,2.56e-28,82;UBERON:0002193,1.07e-25,108;UBERON:0004765,2.89e-25,90;UBERON:0002390,9.39e-25,98;UBERON:0003061,9.39e-25,98;UBERON:0001434,3.93e-22,100;UBERON:0002204,1.57e-15,167;UBERON:0003081,1.21e-12,203;UBERON:0000926,6.00e-07,315;UBERON:0004120,6.00e-07,315;UBERON:0006603,6.00e-07,315 | |||
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| ||
|short_description=p4@AK093984 | |||
}} | }} |
Latest revision as of 21:35, 30 July 2015
Short description: | p4@AK093984 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_AK093984_5end |
Coexpression cluster: | C954_heart_CD14_Neutrophils_Eosinophils_Lymphatic_renal_Monocytederived |
Association with transcript: | 154bp_to_AK093984_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 1.12e-53 | 48 |
phagocyte | 1.12e-53 | 48 |
classical monocyte | 1.42e-52 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.42e-52 | 42 |
myeloid leukocyte | 3.38e-45 | 72 |
monopoietic cell | 1.20e-41 | 59 |
monocyte | 1.20e-41 | 59 |
monoblast | 1.20e-41 | 59 |
promonocyte | 1.20e-41 | 59 |
macrophage dendritic cell progenitor | 4.29e-40 | 61 |
myeloid lineage restricted progenitor cell | 1.28e-36 | 66 |
granulocyte monocyte progenitor cell | 5.50e-36 | 67 |
myeloid cell | 7.17e-28 | 108 |
common myeloid progenitor | 7.17e-28 | 108 |
leukocyte | 1.06e-20 | 136 |
nongranular leukocyte | 1.88e-18 | 115 |
hematopoietic lineage restricted progenitor cell | 1.98e-17 | 120 |
hematopoietic oligopotent progenitor cell | 2.09e-16 | 161 |
hematopoietic multipotent progenitor cell | 2.09e-16 | 161 |
hematopoietic stem cell | 1.96e-15 | 168 |
hematopoietic cell | 2.69e-14 | 177 |
neutrophil | 2.13e-13 | 3 |
granulocyte | 1.69e-08 | 8 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.02e-31 | 76 |
immune system | 1.46e-28 | 93 |
bone element | 2.56e-28 | 82 |
hemolymphoid system | 1.07e-25 | 108 |
skeletal element | 2.89e-25 | 90 |
hematopoietic system | 9.39e-25 | 98 |
blood island | 9.39e-25 | 98 |
skeletal system | 3.93e-22 | 100 |
musculoskeletal system | 1.57e-15 | 167 |
lateral plate mesoderm | 1.21e-12 | 203 |
mesoderm | 6.00e-07 | 315 |
mesoderm-derived structure | 6.00e-07 | 315 |
presumptive mesoderm | 6.00e-07 | 315 |