FFCP PHASE1:Hg19::chr7:150497406..150497501,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr7:150497406..150497501,-
|short_description=p1@TMEM176B
|description=CAGE_peak_1_at_TMEM176B_5end
|association_with_transcript=0bp_to_ENST00000326442,ENST000...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=28959 | |EntrezGene=28959 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29596 | |HGNC=29596 | ||
|TSSclassifier=strong | |||
|UniProt=Q3YBM2,E9PAV4 | |UniProt=Q3YBM2,E9PAV4 | ||
|association_with_transcript=0bp_to_ENST00000326442,ENST00000450753,ENST00000492607_5end | |||
|cluster_id=chr7:150497406..150497501,- | |||
|coexpression_cluster_id=C2886 | |||
|description=CAGE_peak_1_at_TMEM176B_5end | |||
|id=chr7:150497406..150497501,- | |||
|ontology_enrichment_celltype=CL:0002194!3.36e-22!63;CL:0000576!3.36e-22!63;CL:0000040!3.36e-22!63;CL:0000559!3.36e-22!63;CL:0002009!1.94e-21!65;CL:0000839!4.58e-21!70;CL:0000557!1.56e-20!71;CL:0000766!4.34e-20!76;CL:0002057!2.93e-19!42;CL:0000860!1.18e-16!45;CL:0000763!3.78e-11!112;CL:0000049!3.78e-11!112;CL:0000738!1.67e-09!140;CL:0002087!1.38e-08!119;CL:0002031!6.55e-08!124 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.03e-16;39!CL:0000234;1.03e-16;39!CL:0000576;6.74e-16;48!CL:0000860;1.47e-15;33!CL:0002057;1.47e-15;33!CL:0000766;1.80e-11;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0002194,2.16e-28,59;CL:0000576,2.16e-28,59;CL:0000040,2.16e-28,59;CL:0000559,2.16e-28,59;CL:0002009,1.81e-27,61;CL:0000839,2.52e-26,66;CL:0000557,2.59e-26,67;CL:0000766,8.73e-26,72;CL:0000473,1.89e-25,48;CL:0000234,1.89e-25,48;CL:0000860,3.44e-21,42;CL:0002057,3.44e-21,42;CL:0000763,1.71e-14,108;CL:0000049,1.71e-14,108;CL:0000738,4.78e-11,136;CL:0002087,9.81e-10,115;CL:0002031,8.77e-09,120 | |||
|ontology_enrichment_development_v019=CL:0002057;1.62e-15;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!3.57e-47!115;UBERON:0002390!1.71e-19!102;UBERON:0003061!1.71e-19!102;UBERON:0002193!7.67e-18!112;UBERON:0002371!1.03e-16!80;UBERON:0001049!2.25e-16!57;UBERON:0005068!2.25e-16!57;UBERON:0006241!2.25e-16!57;UBERON:0007135!2.25e-16!57;UBERON:0000062!1.14e-15!511;UBERON:0002405!1.76e-15!115;UBERON:0001474!3.69e-14!86;UBERON:0003075!3.86e-13!86;UBERON:0007284!3.86e-13!86;UBERON:0002616!6.20e-13!59;UBERON:0002346!8.92e-13!90;UBERON:0003080!2.20e-12!42;UBERON:0000922!2.56e-12!612;UBERON:0002780!7.03e-12!41;UBERON:0001890!7.03e-12!41;UBERON:0006240!7.03e-12!41;UBERON:0002050!1.92e-11!605;UBERON:0005423!1.92e-11!605;UBERON:0004765!2.74e-11!101;UBERON:0001434!2.74e-11!101;UBERON:0000923!3.40e-11!604;UBERON:0005291!3.40e-11!604;UBERON:0006598!3.40e-11!604;UBERON:0002532!3.40e-11!604;UBERON:0000480!3.52e-11!626;UBERON:0000467!4.03e-11!625;UBERON:0000468!4.28e-11!659;UBERON:0005743!1.55e-10!86;UBERON:0002020!6.90e-10!34;UBERON:0003528!6.90e-10!34;UBERON:0000955!7.01e-10!69;UBERON:0006238!7.01e-10!69;UBERON:0001017!7.41e-10!82;UBERON:0001893!1.31e-09!34;UBERON:0002791!2.10e-09!33;UBERON:0000073!3.08e-09!94;UBERON:0001016!3.08e-09!94;UBERON:0003056!4.45e-09!61;UBERON:0001869!9.26e-09!32;UBERON:0000479!1.32e-08!787;UBERON:0002619!8.84e-08!22;UBERON:0001950!5.76e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;1.01e-12;114!UBERON:0002780;3.43e-09;41!UBERON:0001890;3.43e-09;41!UBERON:0000160;3.75e-09;17!UBERON:0000073;1.10e-08;53!UBERON:0002616;1.10e-08;53!UBERON:0001893;1.97e-08;34!UBERON:0005409;2.21e-08;22!UBERON:0003528;2.36e-08;34!UBERON:0002020;2.36e-08;34!UBERON:0002791;3.66e-08;32!UBERON:0001869;6.52e-08;32!UBERON:0002619;7.16e-08;22!UBERON:0001950;5.51e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,2.41e-50,114;UBERON:0002390,1.02e-23,98;UBERON:0003061,1.02e-23,98;UBERON:0002193,4.71e-22,108;UBERON:0002371,2.81e-20,76;UBERON:0002405,1.25e-18,93;UBERON:0001474,4.35e-17,82;UBERON:0001049,5.36e-16,56;UBERON:0005068,5.36e-16,56;UBERON:0006241,5.36e-16,56;UBERON:0007135,5.36e-16,56;UBERON:0000073,2.03e-14,53;UBERON:0002616,2.03e-14,53;UBERON:0004765,4.72e-14,90;UBERON:0000923,6.00e-14,560;UBERON:0010316,6.00e-14,560;UBERON:0005291,6.00e-14,560;UBERON:0006598,6.00e-14,560;UBERON:0010317,6.00e-14,560;UBERON:0002532,6.00e-14,560;UBERON:0002050,9.35e-14,564;UBERON:0005423,1.07e-13,581;UBERON:0000922,1.30e-13,592;UBERON:0002780,4.26e-12,41;UBERON:0001890,4.26e-12,41;UBERON:0003080,4.26e-12,41;UBERON:0006240,4.26e-12,41;UBERON:0001434,5.56e-12,100;UBERON:0003075,1.96e-11,82;UBERON:0007284,1.96e-11,82;UBERON:0002346,3.15e-11,86;UBERON:0003528,6.58e-10,34;UBERON:0002020,6.58e-10,34;UBERON:0000479,7.15e-10,773;UBERON:0001893,1.29e-09,34;UBERON:0000160,3.62e-09,17;UBERON:0000955,5.34e-09,68;UBERON:0006238,5.34e-09,68;UBERON:0002791,5.52e-09,32;UBERON:0005409,6.94e-09,25;UBERON:0001017,9.70e-09,81;UBERON:0001869,1.07e-08,32;UBERON:0011216,5.26e-08,223;UBERON:0010371,5.79e-08,104;UBERON:0002619,7.42e-08,22;UBERON:0001016,7.81e-08,89;UBERON:0003056,9.95e-08,61;UBERON:0001950,5.71e-07,20 | |||
|phase1_expression=3.63356758541113,1.2846031433459,1.26858963686374,2.00146596706261,8.04529969969118,6.97870819280295,32.9289841618804,53.0644693678538,36.0436166915777,0.245733936501509,0,0,0,0.123766352960047,0.331397375727916,5.3786011716142,0,0,0,0.738726348460727,0,2.82109249330279,0.286235987131057,0,0,0,0.0821005894499457,0,14.9478425202584,18.039981710569,18.1134864279809,0,0,0,0,0,0,1.10799081706375,28.0762226458198,83.549185225603,564.490910558849,713.537746239812,690.30252125962,79.5328366124219,23.0504325650174,14.3124596100812,85.9987436551033,18.5025549609822,14.5561994320699,133.7769624298,34.8378560879577,33.1075121844019,93.081333798887,21.3009945582663,23.0225027210381,105.980437162486,28.6551457560738,24.9443067734044,96.7225099892052,26.3161802202397,19.1801137739712,117.427062866471,41.4884407852994,24.2948107803636,104.185116667662,15.8867862913519,18.6846674698673,110.800661378224,42.7615993104565,31.709571326947,87.7829278818385,27.9891003350549,18.9877432464531,58.7289695947198,265.330166356374,19.9175713232957,51.5588416962413,320.777843109457,6.42902346788321,25.3661341929711,184.395759763557,8.21988691940853,0,0.546138611262131,0,25.1770831314239,2.80277190925209,1.14950487990897,0.661044872784862,0,0.569212969109448,0,0.382273228125229,1.32171328579026,8.40762844472304,0,0.196709770113833,0,0.822405995998037,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0.267540828089713,0,0,0,0,0.253019692019503,0.318565414324097,0,0,31.7713501254101,12.4147012819786,1.24930726552346,4.02521328474829,0,0,0,0.144824403882799,0,1.34140171940727,0.511450247374121,0,0,0,0,0,0.661743720148475,0,1.49319135678314,109.105569889595,0,0,267.427052371459,247.612486439558,7.17972986801872,8.10868122638163,6.86393892936153,6.68623502393217,0,0.860234595106124,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,10.9947198481491,0,0,0,0.311211035399766,0,0,0.151357427644931,0,9.37285727335187,0,0,3.28787097213962,2.93586246609412,15.5398026593406,11.9383185696911,0,0,0,0,1.97813543422845,4.55080680969013,6.46756327634615,0.336672227908132,1.12606667884768,0,0,0,0.45071417671979,0,0,1.06778694409284,0.423863802319124,0,0,0,0,0,0,0,0.276149695926898,0,0,0,0,0,0,0,0,0.132529768321485,1.51052125730374,4.66474747569167,0.504641701751257,0,0,0.643240938192885,0,34.3632266743665,8.66255378003503,0,0,0,0,0,0,0.134831308160164,0,0,0,0,4.5273141246454,4.41026134156626,1085.02309807487,537.606487522661,688.270241283836,0,192.968860074145,0,0,0,0,0,0.651616610620649,0,0,8.92664118308092,0.117408694235822,0,0,0,0,0,134.434485323719,726.349238992194,757.27577186107,0,0,0,0,0,0.766765358330422,0,1.14462964217194,10.3664057770386,16.4296746895336,1.38866676769018,0.380987365753014,0,0,5.13217338068116,0,0,0,0,0.43596006883328,0,0,42.9187735022259,2.535908257668,0,0,0.257207374262142,0,0.266422179016099,0.142977993658148,0,0,2.28015329005615,0,0,0,0,0,27.9734695474738,484.678093232002,42.1667878966063,0,0,0,0,0,0,0,0,0,3.85029108839245,0,0,0,3.35032530668698,0.637938751653163,0,0,0,0,1.00034104211935,0.271265023699736,0,0.178428988797162,0,0,0,0,1.03473071292505,0,0,0,0,0.686286847621712,1.44737618286021,113.034241228955,91.4655170375518,0,0,0,0,0,0,0.128139149255701,0,0,0,0,0,0,0,0,160.863927406449,0,0,2.87036120411517,0.546273504020151,94.9340764306231,3.15839729035188,4.62092022626489,0,0,0.633309773357254,0,0,0,0,0.270946437543853,1.00337954770971,6.11703055308092,6.64860807142979,0,0,0.261435451024901,2.05160100093111,0.328014645699706,5.85681110395745,400.82953530964,0,0,10.3367796839311,1.30012049207304,0,0,4.46740989632469,12.1267903033642,16.4025521256591,236.324538710202,6.38073453222605,6.98858344812027,1.06838442776085,0,0,0,0,0,0,0,0,0,0,0,0,0.372158369359667,0,0,0.511795582622668,1.28381696410176,0,0,214.767714354478,44.7495358469769,21.9131068362977,0,0,0,0,0,0,3.41249778519964,5.79762271010222,0,0,0,0,0,0,0,2.16876448669825,0,0,0,0,0.354761064070598,2.11107635297664,0,0.379473173765715,1.74967360122491,0,3.35151137767894,0,405.948068949472,0,0,0,0,17.2532187138938,18.351292971417,17.659062802399,93.8633195303689,123.408681925858,28.5328256924796,10.8006287447623,11.8968776444141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0.481764225311099,19.3727718903406,54.9341646620521,0,4.60861146462687,7.15763545255731,6.84081481018825,0,0,0,0,0,1.4098700508785,0,41.7548310924898,0,0,0,1.90995587790152,0,0.307160702099232,37.7776106151193,44.451535585722,0,0,0.211125408127993,28.691710308154,94.2128151961214,55.4252045279407,0.409074730008619,2.8309505256046,0,0,0,0.511572370226872,37.089920519487,74.2397586275513,0,32.9573133672374,29.0364147246594,0,0,0,59.4499651856531,0,0,0,4.13692047889758,0,7.46587478213157,27.457982960229,44.1382965368993,9.15490417902499,12.3848771122972,10.3441666633742,21.9385397153973,0,0,27.5481925443593,1.93701494939902,0,0,0,21.0540765423067,3.66390373607449,30.3829822330622,0,0,0,0,0,0,0,0,0,0,12.1563641433189,0,113.45986014295,114.464088467321,135.037662030331,0,0,0,29.99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| ||
|short_description=p1@TMEM176B | |||
}} | }} |
Latest revision as of 03:54, 17 September 2015
Short description: | p1@TMEM176B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TMEM176B_5end |
Coexpression cluster: | C2886_Hepatocyte_liver_Macrophage_CD14_Monocytederived_normal_kidney |
Association with transcript: | 0bp_to_ENST00000326442, ENST00000450753, ENST00000492607_5end |
EntrezGene: | TMEM176B |
HGNC: | 29596 |
UniProt: | Q3YBM2E9PAV4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
monopoietic cell | 2.16e-28 | 59 |
monocyte | 2.16e-28 | 59 |
monoblast | 2.16e-28 | 59 |
promonocyte | 2.16e-28 | 59 |
macrophage dendritic cell progenitor | 1.81e-27 | 61 |
myeloid lineage restricted progenitor cell | 2.52e-26 | 66 |
granulocyte monocyte progenitor cell | 2.59e-26 | 67 |
myeloid leukocyte | 8.73e-26 | 72 |
defensive cell | 1.89e-25 | 48 |
phagocyte | 1.89e-25 | 48 |
classical monocyte | 3.44e-21 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.44e-21 | 42 |
myeloid cell | 1.71e-14 | 108 |
common myeloid progenitor | 1.71e-14 | 108 |
leukocyte | 4.78e-11 | 136 |
nongranular leukocyte | 9.81e-10 | 115 |
hematopoietic lineage restricted progenitor cell | 8.77e-09 | 120 |