FFCP PHASE1:Hg19::chr10:43904868..43904885,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr10:43904868..43904885,+ | |||
|description=CAGE_peak_at_chr10:43904868..43904885,+ | |||
|id=chr10:43904868..43904885,+ | |||
|ontology_enrichment_celltype=CL:0002031!1.41e-08!124;CL:0000003!2.92e-08!722;CL:0000860!1.15e-07!45;CL:0002032!1.52e-07!165;CL:0000837!1.52e-07!165;CL:0000037!1.57e-07!172;CL:0000566!1.57e-07!172;CL:0000839!2.14e-07!70;CL:0000988!2.74e-07!182;CL:0000557!4.32e-07!71;CL:0000738!7.72e-07!140 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.65e-22;3!CL:0002396;1.65e-22;3!CL:0000097;1.62e-14;5!CL:0002328;4.42e-11;3!CL:0002591;1.17e-08;1!CL:0000895;1.17e-08;1!CL:0000163;2.79e-08;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000875,9.51e-23,3;CL:0002396,9.51e-23,3;CL:0000097,1.63e-14,5;CL:0002028,1.63e-14,5;CL:0002393,2.14e-13,9;CL:0002397,2.14e-13,9;CL:0000557,2.00e-11,67;CL:0002328,4.43e-11,3;CL:0000839,1.59e-09,66;CL:0000766,1.31e-08,72;CL:0000810,1.32e-08,1;CL:0000895,1.32e-08,1;CL:0002436,1.32e-08,1;CL:0002427,1.32e-08,1;CL:0002428,1.32e-08,1;CL:0002429,1.32e-08,1;CL:0002433,1.32e-08,1;CL:0002431,1.32e-08,1;CL:0002432,1.32e-08,1;CL:0002591,1.42e-08,1;CL:0000163,2.80e-08,9;CL:0000860,7.53e-08,42;CL:0002057,7.53e-08,42;CL:0000473,9.09e-07,48;CL:0000234,9.09e-07,48;CL:0002031,9.49e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002427;1.17e-08;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;4.42e-11;3!UBERON:0002031;4.42e-11;3!UBERON:0002038;1.17e-08;1!UBERON:0009661;1.17e-08;1!UBERON:0002950;1.17e-08;1!UBERON:0001891;1.17e-08;1!UBERON:0002185;5.56e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.86e-12,76;UBERON:0004815,4.43e-11,3;UBERON:0002031,4.43e-11,3;UBERON:0002405,4.51e-11,93;UBERON:0001474,7.10e-11,82;UBERON:0002390,2.15e-10,98;UBERON:0003061,2.15e-10,98;UBERON:0004765,9.90e-10,90;UBERON:0003081,1.26e-09,203;UBERON:0002193,3.19e-09,108;UBERON:0001434,1.48e-08,100;UBERON:0002038,2.22e-08,1;UBERON:0009661,2.22e-08,1;UBERON:0002950,2.22e-08,1;UBERON:0001891,2.22e-08,1;UBERON:0009616,2.22e-08,1;UBERON:0010286,2.22e-08,1;UBERON:0000485,5.14e-08,9;UBERON:0002204,3.24e-07,167;UBERON:0002185,5.57e-07,5 | |||
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| |||
|short_description=p@chr10:43904868..43904885,+ | |||
}} |
Latest revision as of 13:45, 23 July 2015
Short description: | p@chr10:43904868..43904885, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr10:43904868..43904885, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.86e-12 | 76 |
lower respiratory tract epithelium | 4.43e-11 | 3 |
epithelium of bronchus | 4.43e-11 | 3 |
immune system | 4.51e-11 | 93 |
bone element | 7.10e-11 | 82 |
hematopoietic system | 2.15e-10 | 98 |
blood island | 2.15e-10 | 98 |
skeletal element | 9.90e-10 | 90 |
lateral plate mesoderm | 1.26e-09 | 203 |
hemolymphoid system | 3.19e-09 | 108 |
skeletal system | 1.48e-08 | 100 |
substantia nigra | 2.22e-08 | 1 |
midbrain nucleus | 2.22e-08 | 1 |
regional part of midbrain | 2.22e-08 | 1 |
midbrain | 2.22e-08 | 1 |
presumptive midbrain | 2.22e-08 | 1 |
midbrain neural tube | 2.22e-08 | 1 |
simple columnar epithelium | 5.14e-08 | 9 |
musculoskeletal system | 3.24e-07 | 167 |
bronchus | 5.57e-07 | 5 |