FFCP PHASE1:Hg19::chr11:86454484..86454505,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr11:86454484..86454505,- | |||
|coexpression_cluster_id=C19 | |||
|description=CAGE_peak_at_chr11:86454484..86454505,- | |||
|id=chr11:86454484..86454505,- | |||
|ontology_enrichment_celltype=CL:0000860!9.78e-24!45;CL:0002057!2.20e-22!42;CL:0002194!3.27e-18!63;CL:0000576!3.27e-18!63;CL:0000040!3.27e-18!63;CL:0000559!3.27e-18!63;CL:0002009!2.22e-17!65;CL:0000766!2.53e-17!76;CL:0000839!1.62e-15!70;CL:0000557!3.56e-15!71;CL:0000763!1.42e-09!112;CL:0000049!1.42e-09!112;CL:0002087!4.40e-07!119;CL:0000063!8.76e-07!578 | |||
|ontology_enrichment_celltype_v019=CL:0000511;2.97e-19;1!CL:0002625;2.97e-19;1!CL:0000216;2.97e-19;1!CL:0002393;6.12e-13;6!CL:0002397;6.12e-13;6!CL:0002596;2.60e-10;2!CL:0000860;8.74e-09;33!CL:0002057;8.74e-09;33!CL:0000576;2.51e-08;48!CL:0000473;1.32e-07;39!CL:0000234;1.32e-07;39!CL:0000346;2.05e-07;3!CL:1000428;2.05e-07;3!CL:0000766;2.21e-07;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000511,1.56e-19,1;CL:0002625,1.56e-19,1;CL:0000216,1.56e-19,1;CL:0000860,2.83e-15,42;CL:0002057,2.83e-15,42;CL:0000473,2.36e-13,48;CL:0000234,2.36e-13,48;CL:0002194,1.17e-10,59;CL:0000576,1.17e-10,59;CL:0000040,1.17e-10,59;CL:0000559,1.17e-10,59;CL:0002596,2.07e-10,2;CL:0002009,2.62e-10,61;CL:0000839,1.58e-09,66;CL:0000557,2.20e-09,67;CL:0002393,6.61e-09,9;CL:0002397,6.61e-09,9;CL:0000766,9.95e-09,72;CL:0000346,2.05e-07,3;CL:1000428,2.05e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.47e-10;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!1.02e-14!80;UBERON:0001474!4.49e-14!86;UBERON:0004765!2.06e-12!101;UBERON:0001434!2.06e-12!101;UBERON:0002390!1.19e-09!102;UBERON:0003061!1.19e-09!102;UBERON:0002405!2.71e-08!115;UBERON:0002193!4.66e-08!112;UBERON:0003081!6.82e-08!216;UBERON:0002204!5.24e-07!167 | |||
|ontology_enrichment_uberon_v019=UBERON:0001136;2.97e-19;1!UBERON:0001343;2.97e-19;1!UBERON:0004910;2.97e-19;1!UBERON:0004813;2.97e-19;1!UBERON:0004909;2.60e-10;2!UBERON:0005396;2.60e-10;2!UBERON:0000412;2.05e-07;3!UBERON:0001992;2.05e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001136,1.56e-19,1;UBERON:0001343,1.56e-19,1;UBERON:0004910,1.56e-19,1;UBERON:0005154,1.56e-19,1;UBERON:0005295,1.56e-19,1;UBERON:0004813,1.56e-19,1;UBERON:0005297,1.56e-19,1;UBERON:0005294,1.56e-19,1;UBERON:0010141,1.56e-19,1;UBERON:0005891,1.56e-19,1;UBERON:0004909,1.89e-10,2;UBERON:0005396,2.07e-10,2;UBERON:0002371,2.89e-08,76;UBERON:0001474,1.19e-07,82;UBERON:0000412,2.05e-07,3;UBERON:0001992,2.05e-07,3;UBERON:0004765,5.84e-07,90;UBERON:0002405,9.92e-07,93 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.123121058076788,0,0,0,0,0,0,0,0,0.393364276848904,0.767658796194425,0.154816123316076,0,0,0,0,0,0,1.10799081706375,0.601633342410425,1.08505435357926,0,0,0,0.145398238779565,0.377875943688809,0,0,0.822335776043652,0.619412741790207,0,0.256160706529101,0,1.03423704220986,3.22742341791913,0,0.564727018627814,0.272906150057846,0,1.53041946185451,0.320929027076094,1.27867425159808,0,0.398927315243264,0.426224750532694,0.870627715885752,0,0.622822248995575,0.251248665256743,0.521482918420201,0.65156653411535,0,0.736555271975129,0.632924774881769,0,0,0,0.112328631146495,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.0945348171640679,0.221729397462564,0.175669571386252,0,0,0,0,0,0,0.238490624305342,0,0,0.39752481473341,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.12663051166458,0.529636723252875,0,0,0,0,0.24666754841716,0.311211035399766,0.269421344139376,0,0,0,0.234321431833797,0,0,0,0.117434498643765,0.161872944368132,0,0,0,0,0,0,0,0,0.168336113954066,0,0,0,0.30648779579902,0,0.113432183160021,0.179389635688862,0,0,0,0,0.257640540045629,0,0,0,0,0,0,0,0.10075209822764,0,0,0,0,0,0,0,0,0,0,0,0,2.76269842704961,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122988438543114,0,0,0,0,0.0925884451585296,0,0,0,0.115930404975077,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.383382679165211,0,0,0,0,0,0.063497894292169,0,0,0,0.308482478109971,0,0,0,0,0.07333828582095,0,0,0,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0,0,0,0,0,0,0,0.239624855491583,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0,0,0,0,0,0,0.303127571446259,0,0.30239029332968,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0.183138929636687,0,0,0,1.6068392984416,0,0,0,0,0.107420244868274,0,0.0852266274161009,0,0,0,0.127612712494584,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0.318203247925937,1.56989728039846,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.143411352204052,0,0,0,0,0,0,0,0,0.670302275535787,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0.307160702099232,0,0,0,0.16480387422676,0,0.19924798825107,0,0,0.102268682502155,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0.254253650292766,0,0,0,0,0,0.120596438625408,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.225595660617181,0,0,0,0,0,0.326465616318295,0,0,0,0,0,0,0,0,0,0,0,0,0.19566461893209,0,0,0,0,0,8.41811148721158,0,0,0,0.313932918407225,0,0,0,0.173559738335131,0,0,0,0,0,0.0730893170861856,0.164230914106418,0,0,0,0.137041924646751,0.19871461170299,0,0,0.0801588202515337,0,0,0,0,0,0,0.124252535565433,0.471388069233591,0,0,0.101998217636322,0,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179287339332845,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.704815022316672,0,0,0,0,0,0,0,0,0,0.306345576763462,0,0,0,0,0,0,0,0,0,0,0,0,0.235265819698172,0.468334905806882,0,0,0,0,0,0,0,0,0,0.15543720058278,0,0,0,0,0,0,0,0,0,0,0,0,0.464033759878494,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0.537266523244462,0,0,0,0.771656153083659,0,0,0,0,0,0,0,0,0,0.245772908753719,0,0,0,0,0,0.184105950251841,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.294443155503077,0,0,0,0.381382095467167,0,0,0,1.0085253435176,0,0,0,0,0,0,0.206686796501184,0,0,0,0,0,0,0.535701835878287,0,0,0,0,0,0.171488009437418,0,0,0,0,0,0,0.280272163313789,0,0.647782773655864,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.160482733378337,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr11:86454484..86454505,- | |||
}} |
Latest revision as of 03:19, 24 July 2015
Short description: | p@chr11:86454484..86454505, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr11:86454484..86454505, - |
Coexpression cluster: | C19_embryonic_testis_cord_chronic_CD14_NK_mesothelioma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
androgen binding protein secreting cell | 1.56e-19 | 1 |
seminiferous tubule epithelial cell | 1.56e-19 | 1 |
Sertoli cell | 1.56e-19 | 1 |
classical monocyte | 2.83e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.83e-15 | 42 |
defensive cell | 2.36e-13 | 48 |
phagocyte | 2.36e-13 | 48 |
monopoietic cell | 1.17e-10 | 59 |
monocyte | 1.17e-10 | 59 |
monoblast | 1.17e-10 | 59 |
promonocyte | 1.17e-10 | 59 |
smooth muscle cell of the carotid artery | 2.07e-10 | 2 |
macrophage dendritic cell progenitor | 2.62e-10 | 61 |
myeloid lineage restricted progenitor cell | 1.58e-09 | 66 |
granulocyte monocyte progenitor cell | 2.20e-09 | 67 |
intermediate monocyte | 6.61e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.61e-09 | 9 |
myeloid leukocyte | 9.95e-09 | 72 |
hair follicle dermal papilla cell | 2.05e-07 | 3 |
stem cell of epidermis | 2.05e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mesothelium | 1.56e-19 | 1 |
seminiferous tubule of testis | 1.56e-19 | 1 |
epithelium of male gonad | 1.56e-19 | 1 |
epithelial cord | 1.56e-19 | 1 |
sex cord | 1.56e-19 | 1 |
seminiferous tubule epithelium | 1.56e-19 | 1 |
testis sex cord | 1.56e-19 | 1 |
genital ridge | 1.56e-19 | 1 |
primitive sex cord of indifferent gonad | 1.56e-19 | 1 |
coelomic epithelium | 1.56e-19 | 1 |
epithelium of gonad | 1.89e-10 | 2 |
carotid artery segment | 2.07e-10 | 2 |
bone marrow | 2.89e-08 | 76 |
bone element | 1.19e-07 | 82 |
dermal papilla | 2.05e-07 | 3 |
papillary layer of dermis | 2.05e-07 | 3 |
skeletal element | 5.84e-07 | 90 |
immune system | 9.92e-07 | 93 |