FFCP PHASE1:Hg19::chr16:85617192..85617217,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(One intermediate revision by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr16:85617192..85617217,- | |||
|coexpression_cluster_id=C139 | |||
|description=CAGE_peak_at_chr16:85617192..85617217,- | |||
|id=chr16:85617192..85617217,- | |||
|ontology_enrichment_celltype=CL:0002620!1.43e-15!23;CL:0000055!3.00e-14!180;CL:0000128!1.37e-12!7;CL:0000126!1.37e-12!7;CL:0000127!1.37e-12!7;CL:0002453!1.37e-12!7;CL:0000057!3.82e-12!75;CL:0000221!2.48e-09!71;CL:0000133!3.05e-09!59;CL:0002559!2.46e-08!4;CL:0000346!7.89e-07!3;CL:1000428!7.89e-07!3 | |||
|ontology_enrichment_celltype_v019=CL:0002559;1.79e-16;5!CL:0000346;1.18e-12;3!CL:1000428;1.18e-12;3!CL:0000306;1.03e-09;4!CL:0002222;1.03e-09;4!CL:0002224;1.03e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002559,1.38e-16,5;CL:0000346,8.34e-13,3;CL:1000428,8.34e-13,3;CL:0000306,8.63e-10,4;CL:0002222,8.63e-10,4;CL:0002224,8.63e-10,4 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.32e-10;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0003102!1.46e-14!95;UBERON:0002097!3.39e-14!40;UBERON:0002199!3.22e-13!45;UBERON:0002416!3.22e-13!45;UBERON:0000475!1.34e-11!365;UBERON:0001801!1.35e-11!14;UBERON:0005085!6.63e-11!29;UBERON:0001444!9.10e-11!48;UBERON:0002104!3.48e-10!21;UBERON:0007625!1.29e-09!11;UBERON:0000914!1.40e-09!83;UBERON:0002329!1.40e-09!83;UBERON:0003077!1.40e-09!83;UBERON:0003059!1.40e-09!83;UBERON:0007282!1.40e-09!83;UBERON:0009618!1.40e-09!83;UBERON:0007285!1.40e-09!83;UBERON:0000019!1.60e-09!19;UBERON:0000047!1.60e-09!19;UBERON:0004088!1.60e-09!19;UBERON:0003072!1.60e-09!19;UBERON:0003071!1.60e-09!19;UBERON:0004128!1.60e-09!19;UBERON:0002067!3.96e-09!9;UBERON:0004016!3.96e-09!9;UBERON:0010083!3.96e-09!9;UBERON:0000970!6.55e-09!20;UBERON:0004290!1.01e-08!70;UBERON:0001032!1.59e-08!24;UBERON:0004456!1.59e-08!24;UBERON:0000481!2.04e-08!347;UBERON:0000153!2.21e-08!129;UBERON:0007811!2.21e-08!129;UBERON:0001456!2.34e-08!21;UBERON:0002073!2.46e-08!4;UBERON:0005086!2.46e-08!4;UBERON:0000486!4.97e-08!82;UBERON:0000924!8.16e-08!173;UBERON:0006601!8.16e-08!173;UBERON:0000488!1.27e-07!4;UBERON:0004121!1.29e-07!169;UBERON:0002203!1.95e-07!6;UBERON:0001768!1.95e-07!6;UBERON:0000020!2.13e-07!23;UBERON:0000033!2.75e-07!123;UBERON:0000064!5.16e-07!219;UBERON:0000412!7.89e-07!3;UBERON:0001992!7.89e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0002073;1.79e-16;5!UBERON:0000412;1.18e-12;3!UBERON:0001992;1.18e-12;3!UBERON:0010371;9.04e-12;31!UBERON:0002097;5.40e-11;41!UBERON:0002104;3.57e-10;21!UBERON:0001801;4.02e-10;14!UBERON:0003102;4.53e-10;50!UBERON:0000941;6.32e-10;1!UBERON:0001785;6.32e-10;1!UBERON:0002464;6.32e-10;1!UBERON:0004904;6.32e-10;1!UBERON:0001021;6.32e-10;1!UBERON:0010077;1.03e-09;4!UBERON:0005389;1.03e-09;4!UBERON:0000484;1.03e-09;4!UBERON:0000965;1.03e-09;4!UBERON:0001803;1.03e-09;4!UBERON:0001003;1.48e-09;15!UBERON:0007376;1.48e-09;15!UBERON:0002067;2.87e-09;9!UBERON:0001032;6.99e-09;24!UBERON:0004456;6.99e-09;24!UBERON:0007625;1.14e-07;11!UBERON:0000019;1.69e-07;19!UBERON:0000047;1.69e-07;19!UBERON:0004088;1.69e-07;19!UBERON:0010230;1.69e-07;19!UBERON:0000970;3.96e-07;20!UBERON:0001456;8.54e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005085,6.59e-17,31;UBERON:0002073,1.38e-16,5;UBERON:0005086,1.38e-16,5;UBERON:0000412,8.34e-13,3;UBERON:0001992,8.34e-13,3;UBERON:0002097,1.37e-12,41;UBERON:0002199,4.13e-11,46;UBERON:0002416,4.13e-11,46;UBERON:0000019,1.26e-10,20;UBERON:0000047,1.26e-10,20;UBERON:0010312,1.26e-10,20;UBERON:0004088,1.26e-10,20;UBERON:0010230,1.26e-10,20;UBERON:0003072,1.26e-10,20;UBERON:0004128,1.26e-10,20;UBERON:0003071,1.26e-10,20;UBERON:0000970,4.11e-10,21;UBERON:0002104,4.11e-10,21;UBERON:0001801,4.87e-10,14;UBERON:0000941,5.79e-10,1;UBERON:0001785,5.79e-10,1;UBERON:0002464,5.79e-10,1;UBERON:0004904,5.79e-10,1;UBERON:0001021,5.79e-10,1;UBERON:0003902,5.79e-10,1;UBERON:0005425,5.79e-10,1;UBERON:0010077,8.63e-10,4;UBERON:0005389,8.63e-10,4;UBERON:0000484,8.63e-10,4;UBERON:0002546,8.63e-10,4;UBERON:0000965,8.63e-10,4;UBERON:0001803,8.63e-10,4;UBERON:0003073,8.63e-10,4;UBERON:0005426,8.63e-10,4;UBERON:0001003,1.13e-09,15;UBERON:0007376,1.13e-09,15;UBERON:0007383,1.13e-09,15;UBERON:0001456,1.20e-09,22;UBERON:0002067,2.04e-09,9;UBERON:0004016,2.04e-09,9;UBERON:0010083,2.04e-09,9;UBERON:0000020,7.88e-09,24;UBERON:0001032,7.88e-09,24;UBERON:0004456,7.88e-09,24;UBERON:0007625,1.22e-07,11;UBERON:0003102,3.24e-07,99 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34465029290355,0,1.46062018077475,0,0.861847406537515,0.408001382488506,0.313454721478088,0.572471974262113,0.684372125364421,0.502170558379211,0.0764134057479513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.651083453856419,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03988298880475,0.221729397462564,0.351339142772504,0,1.09288586487763,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.132409180813219,0,0,0,0,0,0.311211035399766,0,0,0,0,0.234321431833797,0,1.71141546463335,0.149448680551801,0.23486899728753,0.161872944368132,0,0.816616685019573,0.737005903870608,0.413303124703062,0,0.247266929278557,0,0,0.336672227908132,0.125118519871964,1.38532057742091,0,0.612975591598039,0,0.113432183160021,0.358779271377724,0.427114777637135,0,0.300091096084402,1.13357782162283,0,0.18611685633159,0.168776332241266,0,0.252433774244115,0.276149695926898,0,0.710019185033229,1.5112814734146,0.508681776931463,0.193260853163297,0,0,0,0,0.116193942869518,0,0,0,1.56449532329816,0.643240938192885,2.76269842704961,0.464367928031979,2.16563844500876,0,0,0,0,0,0,0,0,0.38474715694639,0,0,0,0,0,0,0,0,0,0.857839051492628,0,0,0,0.185176890317059,0.651616610620649,0,1.44331342025273,2.78232971940184,0.352226082707465,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.428933980974443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205476322550383,0,0.336255431980582,0,0,0,0.76228387266739,0,0,0.335032530668698,0,0,0,0,0,0,0,0.415941723061614,0,0.946214490203608,0.117141414992713,0,0,0,0,0,0.434418072340414,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0.177561725313127,0,0,0,0,0,0,0.114814448164607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256450125116389,0,0,0,0,0,0,0,0,0,0.154048617114644,0,0,0,0,0.0852266274161009,0,0,0,0,0,0,0,0,0.308033580176089,0,0,0,0,0,0,0,1.27948895655667,0,0,0,0.179872457583315,0.823611089208164,0.589062011728432,0.202182481573316,0,2.10629228119491,0,0,0,0.136499911407986,0,0,0,0,0,0,0.655894752046633,0,0.92947049429925,0.281695602532241,0.430234056612155,0,0,0,0,0,0.379473173765715,0,0,0,0,0,0,0,0.443430153536676,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.86849240264931,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.281338832821026,0,0,0,0,0,0,14.6244215978081,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0769502585037971,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0.189753732724185,0,0,0,0,0,0,0.0884575645033392,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.229160424011684,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.326587360109409,0,0,0,0.679872549120754,0,0,0,0,0,0,0.106787412567695,0,0,0,0,0,0,0,0,0,0,0.157054096250234,0,0,0,0,0,0,0,0,0,0,0,0,1.88397337194073,0,0,0.554805861502613,0,0,0,0,0,0.15543720058278,0,0.159296767163702,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219284049578707,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0.737318726261158,0,0,0,0,1.13503190713367,0,0,0,0,0.107824811396682,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42769420259154,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,1.05522746615772,0,0,0,0,0,0,0,0,0,0,0,0,0,0.157115589916002,0,0,0,0,0,0,0.116241425368125,0,0,0,0,0,0,0,0,0,0,0,0,0,3.23895770930302,0,0,0.102662806856247,0,0,2.33939463462106,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.135982980381829,0.436350690340377,0,0,0,0,0.504665699340316,0.437062287854782,0,0,0,0,0,0,0,0,0,0,0,0.452122368852043,0.0620747142958579,0.112131862580613,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr16:85617192..85617217,- | |||
}} |
Latest revision as of 13:01, 25 July 2015
Short description: | p@chr16:85617192..85617217, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr16:85617192..85617217, - |
Coexpression cluster: | C139_astrocytoma_skin_salivary_gall_serous_Mallassezderived_renal |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hair follicle cell | 1.38e-16 | 5 |
hair follicle dermal papilla cell | 8.34e-13 | 3 |
stem cell of epidermis | 8.34e-13 | 3 |
crystallin accumulating cell | 8.63e-10 | 4 |
vertebrate lens cell | 8.63e-10 | 4 |
lens epithelial cell | 8.63e-10 | 4 |