FFCP PHASE1:Hg19::chr17:72869075..72869082,-: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2232 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3642 | |||
|TSSclassifier=strong | |||
|UniProt=B4DQQ4 | |||
|association_with_transcript=16bp_to_ENST00000420580_5end | |||
|cluster_id=chr17:72869075..72869082,- | |||
|description=CAGE_peak_3_at_FDXR_5end | |||
|id=chr17:72869075..72869082,- | |||
|ontology_enrichment_celltype=CL:0000066!4.29e-22!254;CL:0002321!2.02e-17!248;CL:0000220!1.08e-16!246;CL:0002076!1.50e-13!43;CL:0000223!4.32e-12!59;CL:0000076!1.46e-08!62;CL:0002368!8.76e-08!13;CL:0002251!3.20e-07!21 | |||
|ontology_enrichment_celltype_v019=CL:0002368;3.12e-16;13!CL:0002076;5.41e-13;42!CL:0002202;1.33e-12;9!CL:0002632;1.33e-12;9!CL:0002159;8.28e-12;14!CL:0000240;1.90e-09;6!CL:0000311;1.90e-09;6!CL:0000079;1.90e-09;6!CL:0000237;1.90e-09;6!CL:0002328;1.56e-08;3!CL:0000307;5.34e-08;3!CL:0000312;1.02e-07;5!CL:0000076;1.62e-07;63!CL:0002251;1.95e-07;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,2.21e-17,253;CL:0002368,7.54e-17,13;CL:0002076,8.61e-17,42;CL:0000076,4.18e-14,63;CL:0000223,3.01e-13,58;CL:0002202,7.41e-13,9;CL:0002632,7.41e-13,9;CL:0002159,9.35e-12,14;CL:0002321,6.72e-11,250;CL:0000240,3.03e-09,6;CL:0000311,3.03e-09,6;CL:0000079,3.03e-09,6;CL:0000237,3.03e-09,6;CL:0000036,3.03e-09,6;CL:0000357,3.03e-09,6;CL:0000114,3.03e-09,6;CL:0002328,1.52e-08,3;CL:0000068,3.34e-08,3;CL:0000069,3.34e-08,3;CL:0000307,3.34e-08,3;CL:0000377,3.34e-08,3;CL:0000312,1.91e-07,5;CL:0002251,2.36e-07,20;CL:0002077,7.74e-07,34 | |||
|ontology_enrichment_development_v019=CL:0000357;1.90e-09;6!CL:0000114;1.90e-09;6!CL:0000377;5.34e-08;3!CL:0000223;1.76e-07;58 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0004815;1.56e-08;3!UBERON:0002031;1.56e-08;3!UBERON:0007196;4.79e-07;15!UBERON:0001558;4.79e-07;15!UBERON:0000490;6.22e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,1.52e-08,3;UBERON:0002031,1.52e-08,3;UBERON:0007196,3.45e-07,15;UBERON:0001558,3.45e-07,15 | |||
|phase1_expression=0.363356758541113,0.214100523890983,0,1.0007329835313,0.893922188854576,0,0,0,0.261185628199839,0.491467873003018,2.79120467188971,0.218441372130172,0,0,0.331397375727916,0,0.602694528023977,0,0.487932798790507,0.246242116153576,1.02000345622126,0,0,0.136874425072884,0.125542639594803,0.764134057479513,0.410502947249729,0.865818594450472,0,0,0,9.19421224478927,3.91567694411725,5.17655614233503,0.232401601740905,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.334231370655521,0,0,0,0.128091319725675,0.390178042679635,0,0.829050053357545,0,0,0,0,0.113309342697566,0,0,0,0.318565414324097,0,0,0,0,0,0.236777252044017,0,0,0,0,0,0,0.383587685530591,0.361439152384566,0,0.144846518960824,0,0.486634870302636,0.283604451492204,0.221729397462564,0.263504357079378,0.327447688744282,5.10013403609559,4.82019775619758,0,0,0,0,0,0,0.198762407366705,1.72046919021225,1.38856200643038,0.56530794192401,1.25849830862972,1.37559020970034,0.835979866147242,1.03366703667732,0,0.66944122552934,0.402829317109147,0,1.22031028774085,0.367663080345869,1.62028389576352,0.446498641420399,0.44905874525234,0.225222960966644,1.53316637465883,0,0.183201743930407,0,0,11.3384453557059,0,0,0.662045904066094,0.286836620748814,0,0,0,1.2333377420858,0,0.269421344139376,0.326923806226917,0.302714855289863,0,1.40592859100278,0,0.570471821544449,0.298897361103602,0,0.161872944368132,0,0,0,0.103325781175765,0,0.247266929278557,0,0,0.168336113954066,0,0.277064115484183,0,0,0.150238058906597,0.453728732640084,0.538168907066586,0.213557388818567,0.211931901159562,0,0,0,0.37223371266318,0,0.194874010322397,1.00973509697646,0.276149695926898,0.161646056818812,0,0,0,1.15956511897978,0.818238361772504,1.14721838155602,1.34171076742555,0.795178609928912,0.813357600086629,0.621966330092223,0.756962552626885,0,0,0,0,0,1.44375896333917,0.236613600079688,0.337169380156203,0.241011029883482,0.55146986366197,0,0,0.269662616320329,0,0.769494313892781,2.21446636387394,0,0,0,0,0,0,0.441463099414651,0.245976877086227,0.343135620597051,1.31700342490351,4.49607013030478,1.00528972411631,1.48141512253647,0.651616610620649,0,0,0.231860809950154,0.352226082707465,0.577465791044295,0.462985512576611,0.570762456703795,1.58040879591855,0,0,0,0,1.87467667973554,1.17587489739202,0.283550194484773,1.16426079513703,1.45316969256981,4.21720947081732,0,0.088048434013226,0,2.30591925467138,0,0.126995788584338,1.14596527667483,0,0,0,0.901029173531752,1.14330573052231,0,0.43596006883328,0.07333828582095,0.129271715757778,0,0.845302752556,0,1.04007436911366,0.257207374262142,0,0.266422179016099,0.285955987316295,0,0,0,0.355391948742546,0,0.602878754119172,0,0.599837947092342,0,0,0,0,0,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0.12269149171914,0,0.542530047399471,0.831883446123229,0.178428988797162,0,0.117141414992713,0,11.3703752027992,0,0,0,0.521301686808497,0.391602314925481,0,0,0,0.106727557803444,2.42502057157008,1.66435439510497,0.30239029332968,0.248107807818777,0.153461973288062,0.561320188866147,0,0,0,0,0,0.710246901252508,0.164254312027618,0,0.116210378459959,0.120859449591622,2.00506470303285,0.276242966807689,0,0,0.786746489756545,0,0.385076685522074,0.784349769176855,0,0.105551628892876,0,0.850468526382578,0,0,0.270946437543853,0,0,0,0.223874754722178,0.438519753291869,0,0,0.328014645699706,0,0.103041011647722,0.0915694648183434,0.165018999841176,0,0,0,0.386682873168488,0.154048617114644,0.460511024178389,0.137836572484531,0.429680979473094,0.145016693914229,0.170453254832202,0.178064071293475,0.661139661443912,1.72971060628596,1.53135254993501,1.51736671283325,0.464845549297286,0.62962469366128,0.6970372701606,0.308033580176089,1.59691809095107,0.869932992075073,0,0.715624433709956,0,0,0.190630193923825,0.767693373934002,0,0.318203247925937,0,0.359744915166629,0.823611089208164,0.353437207037059,0.202182481573316,0,0,0,0.243713489631284,0,0,0.565621727814851,0,0,0,1.31535265576129,0,0,0.608731130888112,0.30982349809975,0.563391205064483,0.143411352204052,0.196498082026242,0.35667105148125,0.354761064070598,0,0.329294892959902,0.379473173765715,0.349934720244983,1.63577591633371,4.69211592875051,7.62236894029258,0.282431402330337,1.29151611801369,3.36942951335251,2.21715076768338,0.689170200620878,0,0,0,0,0,0,0,0,1.06824071127473,1.92495971052672,1.47024129588619,0,0.144269212976445,0.0711418433484141,0.159426272728822,0,0.191505370132367,0,0,0,0,0,0,0.677167111206413,0,0.201799707191048,1.70338495076131,0.687010689511529,0,0,0,0.390776190804081,2.50565556505718,0,0,0.66614393599564,0,0.37428108081644,0,0.121360521749513,0.222886768554957,0,0.23874448473769,0,0.307160702099232,0,0.140669416410513,0.111308705022906,0.16480387422676,0.63337622438398,0,0,0.503865495708552,0.102268682502155,0.861593638227486,0,0.359473404589307,0,0,0.0986434056369336,0,0,0,0.0927680981618513,0,0.520855522170466,0.262379999988587,0,3.86897724170699,1.5255219017566,0,1.03423011972439,0,0.173624994933292,0,0,0,0.221158519862449,0,0.219385397153973,0,2.78847488557207,0.153900517007594,0.113942055847001,0.23056390438806,0.718061155278177,0,0,0.183195186803725,0,0,0.156980256395025,0,0.225595660617181,0,0,0.189753732724185,0.158936578980379,0.632994193584081,0,0,0.216388639742091,0,0,0,2.37216902944498,1.60633120630454,0.939797545549098,0.134802265961354,0,0,0,0.391329237864179,0.485560759068186,0,0,0,0,0.751617097072463,0.311064574191741,0,0,0.313932918407225,0,0,0.416024019039416,0.867798691675654,1.66587075604442,0.34823682632161,0.52418000472609,0.171986032471617,0.0967563312890851,0,0.164230914106418,0.872901148395775,0.0882561266915003,0.225980740780532,0.137041924646751,0,0,0.195551382734803,0,0.213452994739353,0.19980960958213,0.288180834308212,0.343609788497747,0.343189995723929,0,0.124252535565433,1.41416420770077,0.135904206073614,0.104602846312333,0,0,0,0,0,0.429765441419957,0.525774708558629,0,0,0,0,0,0,0.0671834724867263,0.360299883542404,0,0.709048640765013,0.576911008668165,0.606631894687664,0.196854963029498,1.01607998478941,0.795229689809303,0,1.12527203925513,0.275078873194468,1.66176135211674,0,0.77380195455795,0.121499113316049,11.404779378375,0.0788057072991982,0,0,0.179287339332845,0.575745591958336,0.714695326373367,0,1.27134268827375,0,0,0.326587360109409,1.19730191562487,0,0.340776043570843,0.113312091520126,0.146552233678082,0,0.129282956361551,0.13223260174269,0.342173675768659,0,0.213574825135389,0.628817220398664,0,0,0.197611631897944,0.121792598380896,0,0,0.2506898940227,0,0,0,0,0.122026264901963,0.1251909307065,0,0.110929051536852,0,0.830091809617385,2.12466693535581,0.151649117541648,0.285465333544967,0,0,3.04334160082733,0.597019211547496,0,0,0,0.50313580350515,0,0.686520205190771,0.302461847526478,0,0.147855149989634,0,0,0.310525913752519,0,0,1.04349012362347,0.150257608997218,0.761610424337591,0,0.363697318405119,0.322231671127465,0,0.398095888698616,0.400027764663154,0.343395705182793,0.336749488765919,0,0,0.214441591374926,0,0,0.231522474323834,0,0.179088841081487,0.308801447160972,0.219284049578707,1.06013487567529,1.73622634443823,0,0.256241518587947,2.41801239211839,0,0,0,0,0,0,0.491545817507439,0.211312123358627,1.79988656269437,0.106691729694141,0,0,0,1.81843360035278,0,0.383683113910955,0.107824811396682,0.471797825567689,0.109209638192014,0,0,0.371807292777007,0,0.318004350653419,0.315446980005013,0,0.705351887381368,0.6124909547064,0.0642292250964595,0,0.159633859057151,0.205116364240755,0.504143392443436,0,0.161475645631851,0,2.35554524402461,0.471878893390961,2.93485757634686,0.115525666150338,0.381382095467167,1.3807198521202,0,0.376051641746286,0.20170506870352,0.781514011233092,1.04762677792569,0,0,0.135075169236789,0,0,0.0634158101939068,0.546974809018219,0,0,1.58284119923659,1.14986184875636,0,0,0,0,0.177404740325278,0,0,0,0,0,0.111231401892069,0,0,0,0,0.215927591218621,0,0,0.94808167039636,0.697448552208751,0.173858272302579,0,1.03608082081518,1.87790324803345,0.691259661814092,0.860454717640555,0.709992004383392,0.681707238073262,0.423387050190929,0.4582137370881,0,0.955538938977433,0.671132590786754,0.098150233615243,0.975343399858155,1.29485767437579,0.718639647993729,0,0,0,0.198950775161368,0,0.45178432815584,0,0.150962843566674,0.0771741581079447,0,0,0,0.235676547101626,0,0.297046400327086,0,0,0.0939839179798536,0.128915775947154,1.39917618294901,0.892769693028288,1.41157948686277,0,0,0.458729283404541,0,0.315543124386369,0,0,0,0.371995018166751,0,0,0.630832124175395,0,0.506794004045748,0.509944148709909,0.534434810531121,0.0918948995348449,0.250707539292375,0.303114792872958,1.07185652062471,0,0.103432995861895,0.213233981900981,0.476128862927481,0.0645889098360061,0.0620747142958579,0,0.12729431655633,0,1.08858373948481,0.342233301085281,0.202056159043763,0.358611026963382,0.332660356546013,0.569822880276821,0,0,0.179650404213174,0,0.122241444182866,0,0,0.201273793591026,0.961705476909699 | |||
|short_description=p3@FDXR | |||
}} |
Latest revision as of 09:15, 17 September 2015
Short description: | p3@FDXR |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FDXR_5end |
Coexpression cluster: | NA |
Association with transcript: | 16bp_to_ENST00000420580_5end |
EntrezGene: | FDXR |
HGNC: | 3642 |
UniProt: | B4DQQ4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 2.21e-17 | 253 |
respiratory epithelial cell | 7.54e-17 | 13 |
endo-epithelial cell | 8.61e-17 | 42 |
squamous epithelial cell | 4.18e-14 | 63 |
endodermal cell | 3.01e-13 | 58 |
epithelial cell of tracheobronchial tree | 7.41e-13 | 9 |
epithelial cell of lower respiratory tract | 7.41e-13 | 9 |
general ecto-epithelial cell | 9.35e-12 | 14 |
embryonic cell | 6.72e-11 | 250 |
stratified squamous epithelial cell | 3.03e-09 | 6 |
keratin accumulating cell | 3.03e-09 | 6 |
stratified epithelial cell | 3.03e-09 | 6 |
keratinizing barrier epithelial cell | 3.03e-09 | 6 |
epithelial fate stem cell | 3.03e-09 | 6 |
stratified epithelial stem cell | 3.03e-09 | 6 |
surface ectodermal cell | 3.03e-09 | 6 |
bronchial epithelial cell | 1.52e-08 | 3 |
duct epithelial cell | 3.34e-08 | 3 |
branched duct epithelial cell | 3.34e-08 | 3 |
tracheal epithelial cell | 3.34e-08 | 3 |
tracheoblast | 3.34e-08 | 3 |
keratinocyte | 1.91e-07 | 5 |
epithelial cell of alimentary canal | 2.36e-07 | 20 |
ecto-epithelial cell | 7.74e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 1.52e-08 | 3 |
epithelium of bronchus | 1.52e-08 | 3 |
tracheobronchial tree | 3.45e-07 | 15 |
lower respiratory tract | 3.45e-07 | 15 |