FFCP PHASE1:Hg19::chr1:174933810..174933821,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(2 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9910 | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24663 | |||
|TSSclassifier=strong | |||
|UniProt=B7ZAP0 | |||
|association_with_transcript=-83bp_to_ENST00000367688,NM_001243764,uc010pmv.1_5end | |||
|cluster_id=chr1:174933810..174933821,+ | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_18_at_RABGAP1L_5end | |||
|id=chr1:174933810..174933821,+ | |||
|ontology_enrichment_celltype=CL:0000738!2.72e-30!140;CL:0002087!1.75e-26!119;CL:0000037!3.69e-24!172;CL:0000566!3.69e-24!172;CL:0002032!2.81e-23!165;CL:0000837!2.81e-23!165;CL:0002031!1.22e-22!124;CL:0000988!1.34e-21!182;CL:0000766!1.68e-21!76;CL:0002057!1.03e-19!42;CL:0002194!4.84e-19!63;CL:0000576!4.84e-19!63;CL:0000040!4.84e-19!63;CL:0000559!4.84e-19!63;CL:0000839!2.65e-18!70;CL:0002009!4.16e-18!65;CL:0000860!9.05e-18!45;CL:0000763!1.69e-16!112;CL:0000049!1.69e-16!112;CL:0000557!1.24e-15!71;CL:0002393!6.72e-13!9;CL:0002397!6.72e-13!9;CL:0000791!1.26e-08!18;CL:0000789!1.26e-08!18;CL:0002420!1.26e-08!18;CL:0002419!1.26e-08!18;CL:0000790!1.26e-08!18;CL:0000094!8.59e-07!8;CL:0000542!9.38e-07!53;CL:0000051!9.38e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000875;1.05e-16;3!CL:0002396;1.05e-16;3!CL:0000453;1.26e-09;5!CL:0000766;1.29e-09;69!CL:0000576;1.96e-09;48!CL:0002393;1.80e-08;6!CL:0002397;1.80e-08;6!CL:0000775;3.49e-08;3!CL:0000898;1.56e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0002393,1.00e-20,9;CL:0002397,1.00e-20,9;CL:0000875,9.96e-17,3;CL:0002396,9.96e-17,3;CL:0000766,1.05e-14,72;CL:0000738,2.97e-13,136;CL:0000473,4.32e-13,48;CL:0000234,4.32e-13,48;CL:0000763,6.99e-13,108;CL:0000049,6.99e-13,108;CL:0000860,7.56e-13,42;CL:0002057,7.56e-13,42;CL:0002194,8.06e-12,59;CL:0000576,8.06e-12,59;CL:0000040,8.06e-12,59;CL:0000559,8.06e-12,59;CL:0002009,2.36e-11,61;CL:0002032,1.80e-10,161;CL:0000837,1.80e-10,161;CL:0000839,2.61e-10,66;CL:0000557,4.04e-10,67;CL:0000037,7.65e-10,168;CL:0000453,1.13e-09,5;CL:0000988,4.15e-09,177;CL:0000775,3.43e-08,3;CL:0002087,7.92e-08,115;CL:0000898,1.79e-07,3;CL:0002031,2.27e-07,120 | |||
|ontology_enrichment_development_v019=CL:0002057;4.72e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.65e-24!102;UBERON:0003061!2.65e-24!102;UBERON:0002193!6.52e-23!112;UBERON:0000178!3.52e-13!15;UBERON:0000179!3.52e-13!15;UBERON:0000463!3.52e-13!15;UBERON:0002371!1.16e-12!80;UBERON:0002405!3.75e-12!115;UBERON:0007023!1.64e-11!115;UBERON:0001474!4.68e-11!86;UBERON:0004765!5.75e-08!101;UBERON:0001434!5.75e-08!101;UBERON:0003081!2.64e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;3.36e-28;15!UBERON:0000179;3.36e-28;15!UBERON:0000463;3.36e-28;15!UBERON:0002390;2.20e-11;32 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,3.43e-28,15;UBERON:0000179,3.43e-28,15;UBERON:0000463,3.43e-28,15;UBERON:0002390,5.07e-23,98;UBERON:0003061,5.07e-23,98;UBERON:0002193,1.95e-20,108;UBERON:0003081,1.49e-09,203;UBERON:0002371,1.23e-08,76;UBERON:0001474,7.94e-08,82;UBERON:0002405,9.08e-08,93;UBERON:0004765,6.43e-07,90 | |||
|phase1_expression=0.181678379270557,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0.157421562627358,0.786728553697808,0.767658796194425,0.619264493264304,0,0,0,0.0774672005803016,0,0,0.553995408531877,0.200544447470142,0.434021741431704,1.56740831967947,0.647787332037959,0.77272670290256,0.726991193897824,1.88937971844405,2.42584061187816,0,0,0.619412741790207,0,0,0.236482229888585,0.344745680736619,0,0,0.564727018627814,0,0.898893937780338,0,0.320929027076094,0.639337125799041,0.329851300186716,0.199463657621632,0,0,0.56738522469114,0,0,0,0.434377689410233,0.605399502633369,0.736555271975129,0,3.16882929467913,2.12604299965044,3.56419697364239,2.69588714751588,1.35159203557356,1.76798145366788,3.99017841237748,4.97291692997725,5.29726045917438,0,0.546138611262131,0,0.426730222566507,0,0,0.661044872784862,0,0,0,0,0,0,0,0.393419540227666,0,0.205601498999509,2.84217042164153,1.30368906653436,0,0,2.1167986808183,0.589211814949674,1.10766947291811,1.08321545506006,1.79327847615945,1.04047478047903,0.986627427622057,0.276350017785848,0.289803085735052,0.296573126324121,0.267540828089713,0,1.0197840842781,1.14966148080576,0,0.506039384039006,1.59282707162048,0,0.950452044448374,0.752875595388864,0.76791966692651,0,0,0,0.201606743224732,0.534880391567015,0.144824403882799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.22462922052443,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161646056818812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.982827216677626,0,0,0,0,0,0,0,0,0,0,0,0,0.117408694235822,0,0,0,0,0,0.492434012174795,0.234004265139238,0.297262324577456,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,0.502257091432126,0,0,0,0,0,0,0,0,0.394061520403854,0.215627574859517,0.128343036279748,0,0,0,0,0,9.73709131131337,0,6.21623270154053,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413536052245775,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0,0.128139149255701,0.511707249066704,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438519753291869,0.261435451024901,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.267096106940212,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.847294206991012,0,0,0,0,35.0138850370197,35.1733115285493,21.076945925444,14.7703700783829,12.752230465672,27.2358790700941,28.6216661736201,17.4487538784739,0,0,0,0.185803175125719,0,0,0,0,0.191505370132367,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33307196799782,0,0,0,0,0,0,0.47748896947538,0.890894042497916,0.614321404198464,0,0,0,0,0,0.19924798825107,0.276283915531148,0,0,0,0,0.179736702294654,0,0,0.197286811273867,2.3948309234694,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0,0,0,0,0,0,0,0,0,0,0.230850775511391,0,0,0.448788222048861,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,0.063186579628488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.581934098930517,0,0.225980740780532,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136905378891993,0,0,0,0,0,0,0.199679000498991,0,0,0,0,0,0,0,0,0,0,0,0.136203406111576,0,0,0,0,0,0,0,0,0,0,0,0,0,0.662091970365432,0,0,0,0,0,0,0,0,0.293104467356165,0,0,0,0,0,0.320362237703084,0.157204305099666,0,0.992332043623902,0,0,0,0,0,0,0,0,0,0,0.1251909307065,0.573409195690071,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.181848659202559,0,0,0,0,0,0,0,0,0,0,0.226705925512272,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,1.55888247071511,1.32864840313363,2.45348091383766,0,0,0,0.39997479170986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.451261970095544,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0.336283722218824,0,0,2.04015451374069,0,0.171488009437418,0.0679697329768317,0,0,0,0.078493092850514,0,0,0,0,0,0.0714765441766563,0,0,0,0,0,0,0,0,0,0,0.423387050190929,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0771741581079447,0,0,0.245148321753905,0,0,0,0,0,0.187967835959707,0.128915775947154,0,0.178553938605658,0,0,0,0,0,0,0.0679914901909147,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.303114792872958,0,0,0,0,0,0.129177819672012,0.186224142887574,0,0,0,0.217716747896961,0,0.471464371102113,0.143444410785353,0,0,0,0,0,0,0.122241444182866,0,0,0.201273793591026,0 | |||
|short_description=p18@RABGAP1L | |||
}} |
Latest revision as of 19:22, 18 September 2015
Short description: | p18@RABGAP1L |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_18_at_RABGAP1L_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -83bp_to_ENST00000367688, NM_001243764, uc010pmv.1_5end |
EntrezGene: | RABGAP1L |
HGNC: | 24663 |
UniProt: | B7ZAP0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intermediate monocyte | 1.00e-20 | 9 |
CD14-positive, CD16-positive monocyte | 1.00e-20 | 9 |
non-classical monocyte | 9.96e-17 | 3 |
CD14-low, CD16-positive monocyte | 9.96e-17 | 3 |
myeloid leukocyte | 1.05e-14 | 72 |
leukocyte | 2.97e-13 | 136 |
defensive cell | 4.32e-13 | 48 |
phagocyte | 4.32e-13 | 48 |
myeloid cell | 6.99e-13 | 108 |
common myeloid progenitor | 6.99e-13 | 108 |
classical monocyte | 7.56e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.56e-13 | 42 |
monopoietic cell | 8.06e-12 | 59 |
monocyte | 8.06e-12 | 59 |
monoblast | 8.06e-12 | 59 |
promonocyte | 8.06e-12 | 59 |
macrophage dendritic cell progenitor | 2.36e-11 | 61 |
hematopoietic oligopotent progenitor cell | 1.80e-10 | 161 |
hematopoietic multipotent progenitor cell | 1.80e-10 | 161 |
myeloid lineage restricted progenitor cell | 2.61e-10 | 66 |
granulocyte monocyte progenitor cell | 4.04e-10 | 67 |
hematopoietic stem cell | 7.65e-10 | 168 |
Langerhans cell | 1.13e-09 | 5 |
hematopoietic cell | 4.15e-09 | 177 |
neutrophil | 3.43e-08 | 3 |
nongranular leukocyte | 7.92e-08 | 115 |
naive T cell | 1.79e-07 | 3 |
hematopoietic lineage restricted progenitor cell | 2.27e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
blood | 3.43e-28 | 15 |
haemolymphatic fluid | 3.43e-28 | 15 |
organism substance | 3.43e-28 | 15 |
hematopoietic system | 5.07e-23 | 98 |
blood island | 5.07e-23 | 98 |
hemolymphoid system | 1.95e-20 | 108 |
lateral plate mesoderm | 1.49e-09 | 203 |
bone marrow | 1.23e-08 | 76 |
bone element | 7.94e-08 | 82 |
immune system | 9.08e-08 | 93 |
skeletal element | 6.43e-07 | 90 |