FFCP PHASE1:Hg19::chr1:198609269..198609281,+: Difference between revisions
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{{FFCP|DPIdataset= | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |||
|TSSclassifier=strong | |||
|UniProt=NA | |||
|association_with_transcript=NA | |||
|cluster_id=chr1:198609269..198609281,+ | |||
|coexpression_cluster_id=C813 | |||
|description=CAGE_peak_at_chr1:198609269..198609281,+ | |||
|id=chr1:198609269..198609281,+ | |||
|ontology_enrichment_celltype=CL:0002087!2.27e-58!119;CL:0002057!4.96e-57!42;CL:0002031!1.78e-55!124;CL:0000738!1.78e-55!140;CL:0000860!1.47e-52!45;CL:0002032!1.95e-46!165;CL:0000837!1.95e-46!165;CL:0000037!1.77e-45!172;CL:0000566!1.77e-45!172;CL:0000988!4.42e-42!182;CL:0002009!4.98e-37!65;CL:0002194!3.31e-36!63;CL:0000576!3.31e-36!63;CL:0000040!3.31e-36!63;CL:0000559!3.31e-36!63;CL:0000766!1.10e-34!76;CL:0000557!4.37e-33!71;CL:0000839!1.20e-31!70;CL:0000763!2.20e-24!112;CL:0000049!2.20e-24!112;CL:0000838!4.08e-21!52;CL:0000542!1.37e-20!53;CL:0000051!1.37e-20!53;CL:0000236!8.83e-18!14;CL:0000945!1.03e-15!24;CL:0000826!1.03e-15!24;CL:0002393!3.59e-14!9;CL:0002397!3.59e-14!9;CL:0000134!1.99e-13!358;CL:0002320!7.23e-13!365;CL:0000219!6.64e-11!390;CL:0000875!3.62e-09!3;CL:0002396!3.62e-09!3;CL:0000791!5.79e-09!18;CL:0000789!5.79e-09!18;CL:0002420!5.79e-09!18;CL:0002419!5.79e-09!18;CL:0000790!5.79e-09!18;CL:0000048!1.38e-08!430;CL:0000723!2.91e-08!436;CL:0000034!7.64e-08!444;CL:0000625!4.10e-07!11 | |||
|ontology_enrichment_celltype_v019=CL:0000236;3.33e-35;13!CL:0000875;1.01e-22;3!CL:0002396;1.01e-22;3!CL:0000576;1.85e-19;48!CL:0000945;1.41e-18;24!CL:0000766;3.74e-16;69!CL:0000860;5.51e-15;33!CL:0002057;5.51e-15;33!CL:0002393;1.70e-11;6!CL:0002397;1.70e-11;6!CL:0000775;1.83e-10;3!CL:0000473;9.70e-10;39!CL:0000234;9.70e-10;39!CL:0002087;2.42e-09;104!CL:0000542;3.00e-07;53!CL:0000738;3.27e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.74e-35,42;CL:0002057,3.74e-35,42;CL:0000236,1.17e-32,14;CL:0000473,2.08e-30,48;CL:0000234,2.08e-30,48;CL:0002393,8.99e-29,9;CL:0002397,8.99e-29,9;CL:0002087,9.96e-29,115;CL:0000738,1.36e-28,136;CL:0002031,2.27e-27,120;CL:0000766,6.85e-25,72;CL:0002194,9.19e-24,59;CL:0000576,9.19e-24,59;CL:0000040,9.19e-24,59;CL:0000559,9.19e-24,59;CL:0002032,1.61e-23,161;CL:0000837,1.61e-23,161;CL:0002009,6.62e-23,61;CL:0000875,8.75e-23,3;CL:0002396,8.75e-23,3;CL:0000037,2.30e-22,168;CL:0000988,5.14e-21,177;CL:0000839,5.52e-21,66;CL:0000557,1.24e-20,67;CL:0000945,1.34e-18,24;CL:0000826,1.34e-18,24;CL:0000763,1.35e-15,108;CL:0000049,1.35e-15,108;CL:0000775,1.34e-10,3;CL:0000134,2.64e-08,354;CL:0002320,4.69e-08,361;CL:0000838,5.65e-08,52;CL:0000542,8.40e-08,53;CL:0000051,8.40e-08,53;CL:0000219,3.56e-07,386 | |||
|ontology_enrichment_development_v019=CL:0002057;1.69e-24;42!CL:0000049;2.51e-07;108!CL:0000051;3.00e-07;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.38e-30!80;UBERON:0002390!1.10e-27!102;UBERON:0003061!1.10e-27!102;UBERON:0001474!2.12e-27!86;UBERON:0002193!3.05e-24!112;UBERON:0004765!7.22e-22!101;UBERON:0001434!7.22e-22!101;UBERON:0002405!1.42e-20!115;UBERON:0002384!4.18e-12!375;UBERON:0002204!1.51e-09!167;UBERON:0003081!1.05e-07!216 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,6.86e-18,76;UBERON:0001474,2.16e-16,82;UBERON:0002390,3.01e-15,98;UBERON:0003061,3.01e-15,98;UBERON:0004765,1.06e-14,90;UBERON:0002405,3.86e-14,93;UBERON:0002193,1.44e-13,108;UBERON:0001434,5.80e-13,100;UBERON:0002384,1.03e-07,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154816123316076,0,0,0,0.232401601740905,0,0,0.553995408531877,0,0,0,0,0,0.145398238779565,0.377875943688809,0,0.464858073811369,0,0,1.1507695692886,0.256160706529101,2.36482229888585,1.37898272294647,0,1.35426486594342,0.188242339542605,0.545812300115692,0.674170453335254,1.22433556948361,0,0.639337125799041,0.329851300186716,1.19678194572979,0.426224750532694,0.580418477257168,0.56738522469114,0,1.25624332628372,0,1.3031330682307,0.605399502633369,0.368277635987565,1.89877432464531,1.26753171787165,4.03948169933583,3.77385561915077,0.22465726229299,0.750884464207532,0.64290234678832,3.13514018115373,2.78483348078726,4.93193215164512,7.03984977845291,2.18455444504853,5.33705552318133,1.70692089026603,2.00197993518006,5.17277195959035,4.62731410949403,4.77026877267682,0,0.587237189370939,0,0,0,0,0.393419540227666,0,0,0.167186495390678,0.32592226663359,0.473447805734733,0,1.00269411196656,0.589211814949674,0.443067789167242,1.35401931882508,0.384273959177026,0.520237390239513,0.164437904603676,0.276350017785848,0,0.14828656316206,0,0,0.113309342697566,0,0.68725489096526,0.506039384039006,0.318565414324097,0,0,0.451725357233318,0.255973222308837,0,0.473554504088034,0.821127996921047,0.201606743224732,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197030760201927,0,0.256686072559497,0,0,0,0,0,0,2.99161459204025,1.65766205374414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.08006287447623,0,0,0,0,0,0,0,0,0.399158742865633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.166849141711909,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.547364367646998,0,0,0,0,0,0.126373159256976,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106787412567695,0,0.414239055347196,0,0,0.60896299190448,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.516644938982447,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0.657887425858975,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |||
|short_description=p@chr1:198609269..198609281,+ | |||
}} |
Latest revision as of 01:55, 28 July 2015
Short description: | p@chr1:198609269..198609281, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:198609269..198609281, + |
Coexpression cluster: | C813_CD19_CD14CD16_CD14_Macrophage_Monocytederived_pancreatic_choriocarcinoma |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 6.86e-18 | 76 |
bone element | 2.16e-16 | 82 |
hematopoietic system | 3.01e-15 | 98 |
blood island | 3.01e-15 | 98 |
skeletal element | 1.06e-14 | 90 |
immune system | 3.86e-14 | 93 |
hemolymphoid system | 1.44e-13 | 108 |
skeletal system | 5.80e-13 | 100 |
connective tissue | 1.03e-07 | 371 |