FFCP PHASE1:Hg19::chr9:114828005..114828018,-: Difference between revisions
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|id=chr9:114828005..114828018,-
|short_description=p@chr9:114828005..114828018,-
|description=CAGE_peak_at_chr9:114828005..114828018,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr9:114828005..114828018,- | |||
|description=CAGE_peak_at_chr9:114828005..114828018,- | |||
|id=chr9:114828005..114828018,- | |||
|ontology_enrichment_celltype=CL:1000507!1.41e-18!12;CL:1000494!1.41e-18!12;CL:1000497!1.33e-15!18;CL:0002518!1.33e-15!18;CL:0000239!9.06e-15!3;CL:1000615!9.06e-15!3;CL:0002306!9.06e-15!3;CL:1000449!1.11e-13!16;CL:0000159!4.63e-10!2;CL:0002681!7.13e-09!13;CL:0002584!7.13e-09!13 | |||
|ontology_enrichment_celltype_v019=CL:1000507;5.48e-32;10!CL:1000494;5.48e-32;10!CL:1000449;1.66e-21;15!CL:1000497;4.94e-19;17!CL:0002518;4.94e-19;17!CL:0000239;6.78e-08;3!CL:1000615;6.78e-08;3!CL:0002306;6.78e-08;3!CL:0002681;1.57e-07;12!CL:0002584;1.57e-07;12 | |||
|ontology_enrichment_celltype_v019_2=CL:1000507,5.49e-32,10;CL:1000494,5.49e-32,10;CL:1000449,1.66e-21,15;CL:1000497,4.94e-19,17;CL:0002518,4.94e-19,17;CL:0000239,5.54e-08,3;CL:1000615,5.54e-08,3;CL:0002306,5.54e-08,3;CL:0002681,1.42e-07,12;CL:0002584,1.42e-07,12 | |||
|ontology_enrichment_development_v019=UBERON:0003918;6.03e-09;10!UBERON:0007687;6.03e-09;10 | |||
|ontology_enrichment_disease=DOID:4468!3.36e-10!2 | |||
|ontology_enrichment_disease_v019=DOID:4468;3.34e-11;2!DOID:3493;3.34e-11;2 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,3.70e-11,2;DOID:3493,4.09e-11,2 | |||
|ontology_enrichment_uberon=UBERON:0009773!1.41e-18!12;UBERON:0001231!1.41e-18!12;UBERON:0004810!1.41e-18!12;UBERON:0002113!9.90e-16!27;UBERON:0003918!9.90e-16!27;UBERON:0005095!9.90e-16!27;UBERON:0007687!9.90e-16!27;UBERON:0006853!9.06e-15!3;UBERON:0007685!9.06e-15!3;UBERON:0004134!9.06e-15!3;UBERON:0004211!1.11e-13!16;UBERON:0001285!1.11e-13!16;UBERON:0007684!1.11e-13!16;UBERON:0003220!1.11e-13!16;UBERON:0004208!1.11e-13!16;UBERON:0000489!5.83e-13!32;UBERON:0006555!8.11e-13!17;UBERON:0005103!8.11e-13!17;UBERON:0000083!8.11e-13!17;UBERON:0009201!8.11e-13!17;UBERON:0004819!8.11e-13!17;UBERON:0006553!8.11e-13!17;UBERON:0003074!8.11e-13!17;UBERON:0003060!8.11e-13!17;UBERON:0000080!4.76e-12!18;UBERON:0002120!4.76e-12!18;UBERON:0004875!4.76e-12!18;UBERON:0005721!4.76e-12!18;UBERON:0005754!4.76e-12!18;UBERON:0007297!4.76e-12!18;UBERON:0006554!9.57e-11!44;UBERON:0004876!9.63e-11!20;UBERON:0001008!1.86e-10!45;UBERON:0000058!2.81e-10!26;UBERON:0003887!3.50e-10!21;UBERON:0001225!7.13e-09!13;UBERON:0008987!7.13e-09!13;UBERON:0005172!3.03e-08!55;UBERON:0005173!3.03e-08!55;UBERON:0003103!2.84e-07!69;UBERON:0002417!3.20e-07!61;UBERON:0000916!3.20e-07!61;UBERON:0001851!3.80e-07!16;UBERON:0003064!7.22e-07!37 | |||
|ontology_enrichment_uberon_v019=UBERON:0004211;5.48e-32;10!UBERON:0009773;5.48e-32;10!UBERON:0001231;5.48e-32;10!UBERON:0004810;5.48e-32;10!UBERON:0002113;1.24e-29;24!UBERON:0011143;1.24e-29;24!UBERON:0000489;1.53e-24;29!UBERON:0006554;1.00e-23;30!UBERON:0001008;1.00e-23;30!UBERON:0006555;1.66e-21;15!UBERON:0004819;1.66e-21;15!UBERON:0001285;1.66e-21;15!UBERON:0007684;1.66e-21;15!UBERON:0005172;3.56e-12;52!UBERON:0005173;3.56e-12;52!UBERON:0002417;4.21e-08;58!UBERON:0000916;4.21e-08;58!UBERON:0006853;6.78e-08;3!UBERON:0007685;6.78e-08;3!UBERON:0004134;6.78e-08;3!UBERON:0001225;1.57e-07;12!UBERON:0008987;1.57e-07;12!UBERON:0003103;6.33e-07;61 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004810,5.49e-32,10;UBERON:0002113,2.12e-27,26;UBERON:0003918,2.12e-27,26;UBERON:0011143,2.12e-27,26;UBERON:0005095,2.12e-27,26;UBERON:0007687,2.12e-27,26;UBERON:0000489,5.38e-23,31;UBERON:0004211,1.66e-21,15;UBERON:0009773,1.66e-21,15;UBERON:0001231,1.66e-21,15;UBERON:0001285,1.66e-21,15;UBERON:0007684,1.66e-21,15;UBERON:0004208,1.66e-21,15;UBERON:0006555,3.42e-20,16;UBERON:0004819,3.42e-20,16;UBERON:0005172,8.31e-18,54;UBERON:0005173,8.31e-18,54;UBERON:0002417,5.20e-16,60;UBERON:0000916,5.20e-16,60;UBERON:0006554,3.56e-15,47;UBERON:0001008,7.37e-15,48;UBERON:0003103,1.81e-10,68;UBERON:0005177,2.05e-09,101;UBERON:0009569,1.85e-08,112;UBERON:0006853,5.54e-08,3;UBERON:0007685,5.54e-08,3;UBERON:0004134,5.54e-08,3;UBERON:0001225,1.42e-07,12;UBERON:0008987,1.42e-07,12 | |||
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| ||
|short_description=p@chr9:114828005..114828018,- | |||
}} | }} |
Latest revision as of 21:49, 31 July 2015
Short description: | p@chr9:114828005..114828018, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr9:114828005..114828018, - |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney tubule cell | 5.49e-32 | 10 |
nephron tubule epithelial cell | 5.49e-32 | 10 |
epithelial cell of nephron | 1.66e-21 | 15 |
kidney cell | 4.94e-19 | 17 |
kidney epithelial cell | 4.94e-19 | 17 |
brush border epithelial cell | 5.54e-08 | 3 |
kidney cortex tubule cell | 5.54e-08 | 3 |
epithelial cell of proximal tubule | 5.54e-08 | 3 |
kidney cortical cell | 1.42e-07 | 12 |
renal cortical epithelial cell | 1.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
nephron tubule epithelium | 5.49e-32 | 10 |
kidney | 2.12e-27 | 26 |
kidney mesenchyme | 2.12e-27 | 26 |
upper urinary tract | 2.12e-27 | 26 |
kidney rudiment | 2.12e-27 | 26 |
kidney field | 2.12e-27 | 26 |
cavitated compound organ | 5.38e-23 | 31 |
nephron epithelium | 1.66e-21 | 15 |
renal tubule | 1.66e-21 | 15 |
nephron tubule | 1.66e-21 | 15 |
nephron | 1.66e-21 | 15 |
uriniferous tubule | 1.66e-21 | 15 |
nephrogenic mesenchyme | 1.66e-21 | 15 |
excretory tube | 3.42e-20 | 16 |
kidney epithelium | 3.42e-20 | 16 |
abdomen element | 8.31e-18 | 54 |
abdominal segment element | 8.31e-18 | 54 |
abdominal segment of trunk | 5.20e-16 | 60 |
abdomen | 5.20e-16 | 60 |
urinary system structure | 3.56e-15 | 47 |
renal system | 7.37e-15 | 48 |
compound organ | 1.81e-10 | 68 |
trunk region element | 2.05e-09 | 101 |
subdivision of trunk | 1.85e-08 | 112 |
renal cortex tubule | 5.54e-08 | 3 |
region of nephron tubule | 5.54e-08 | 3 |
proximal tubule | 5.54e-08 | 3 |
cortex of kidney | 1.42e-07 | 12 |
renal parenchyma | 1.42e-07 | 12 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 3.70e-11 | 2 |
signet ring cell adenocarcinoma | 4.09e-11 | 2 |