FFCP PHASE1:Hg19::chrX:1387700..1387717,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chrX:1387700..1387717,+
|short_description=p1@CSF2RA
|description=CAGE_peak_1_at_CSF2RA_5end
|association_with_transcript=0bp_to_ENST00000381524,ENST00000412290...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1438 | |EntrezGene=1438 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=2435 | |HGNC=2435 | ||
|TSSclassifier=strong | |||
|UniProt=P15509 | |UniProt=P15509 | ||
|association_with_transcript=0bp_to_ENST00000381524,ENST00000412290,ENST00000493312_5end | |||
|cluster_id=chrX:1387700..1387717,+ | |||
|coexpression_cluster_id=C865 | |||
|description=CAGE_peak_1_at_CSF2RA_5end | |||
|id=chrX:1387700..1387717,+ | |||
|ontology_enrichment_celltype=CL:0000839!1.44e-14!70;CL:0000860!2.13e-14!45;CL:0000557!3.10e-14!71;CL:0000766!6.43e-14!76;CL:0002194!1.03e-13!63;CL:0000576!1.03e-13!63;CL:0000040!1.03e-13!63;CL:0000559!1.03e-13!63;CL:0002009!4.87e-13!65;CL:0002057!2.26e-11!42;CL:0000763!5.77e-10!112;CL:0000049!5.77e-10!112 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.17e-16;33!CL:0002057;1.17e-16;33!CL:0000473;1.47e-13;39!CL:0000234;1.47e-13;39!CL:0000576;1.62e-08;48 | |||
|ontology_enrichment_celltype_v019_2=CL:0000839,1.28e-14,66;CL:0000557,2.77e-14,67;CL:0000766,4.71e-14,72;CL:0002194,1.48e-13,59;CL:0000576,1.48e-13,59;CL:0000040,1.48e-13,59;CL:0000559,1.48e-13,59;CL:0000860,2.66e-13,42;CL:0002057,2.66e-13,42;CL:0002009,7.02e-13,61;CL:0000473,2.70e-12,48;CL:0000234,2.70e-12,48;CL:0000763,2.16e-10,108;CL:0000049,2.16e-10,108 | |||
|ontology_enrichment_development_v019=CL:0002057;1.23e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!5.88e-25!57;UBERON:0005068!5.88e-25!57;UBERON:0006241!5.88e-25!57;UBERON:0007135!5.88e-25!57;UBERON:0002616!6.02e-19!59;UBERON:0003080!6.61e-19!42;UBERON:0002780!9.28e-18!41;UBERON:0001890!9.28e-18!41;UBERON:0006240!9.28e-18!41;UBERON:0002020!7.64e-16!34;UBERON:0003528!7.64e-16!34;UBERON:0003075!3.99e-15!86;UBERON:0007284!3.99e-15!86;UBERON:0001017!5.47e-15!82;UBERON:0007023!1.60e-14!115;UBERON:0000955!1.67e-14!69;UBERON:0006238!1.67e-14!69;UBERON:0002346!5.51e-14!90;UBERON:0005743!7.93e-14!86;UBERON:0002791!3.53e-13!33;UBERON:0001893!1.22e-12!34;UBERON:0001869!4.33e-12!32;UBERON:0002371!1.26e-11!80;UBERON:0000073!1.36e-11!94;UBERON:0001016!1.36e-11!94;UBERON:0003056!9.94e-11!61;UBERON:0002420!1.06e-10!9;UBERON:0007245!1.06e-10!9;UBERON:0010009!1.06e-10!9;UBERON:0010011!1.06e-10!9;UBERON:0000454!1.06e-10!9;UBERON:0002308!1.21e-10!9;UBERON:0000125!1.21e-10!9;UBERON:0001474!3.27e-10!86;UBERON:0002619!7.57e-10!22;UBERON:0000062!2.38e-08!511;UBERON:0000956!2.64e-08!25;UBERON:0000203!2.64e-08!25;UBERON:0004765!3.64e-08!101;UBERON:0001434!3.64e-08!101;UBERON:0009663!4.15e-08!7;UBERON:0002390!6.56e-08!102;UBERON:0003061!6.56e-08!102;UBERON:0001950!8.80e-08!20;UBERON:0001894!3.00e-07!7;UBERON:0006222!3.00e-07!7;UBERON:0003076!3.04e-07!15;UBERON:0003057!3.04e-07!15;UBERON:0002298!3.21e-07!8 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.43e-14;34!UBERON:0002020;8.43e-14;34!UBERON:0002780;1.09e-13;41!UBERON:0001890;1.09e-13;41!UBERON:0002791;1.24e-12;32!UBERON:0000073;1.31e-12;53!UBERON:0002616;1.31e-12;53!UBERON:0002420;7.14e-12;9!UBERON:0007245;7.14e-12;9!UBERON:0010009;7.14e-12;9!UBERON:0010011;7.14e-12;9!UBERON:0000454;7.14e-12;9!UBERON:0000125;8.13e-12;9!UBERON:0002308;8.13e-12;9!UBERON:0001893;2.59e-11;34!UBERON:0001869;3.03e-11;32!UBERON:0002619;9.76e-10;22!UBERON:0009663;5.77e-09;7!UBERON:0000956;2.93e-08;25!UBERON:0000203;2.93e-08;25!UBERON:0001894;4.90e-08;7!UBERON:0001017;8.86e-08;75!UBERON:0001950;1.60e-07;20!UBERON:0002784;4.05e-07;4!UBERON:0000955;5.76e-07;68!UBERON:0001016;6.12e-07;83 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,7.75e-26,56;UBERON:0005068,7.75e-26,56;UBERON:0006241,7.75e-26,56;UBERON:0007135,7.75e-26,56;UBERON:0000073,3.95e-22,53;UBERON:0002616,3.95e-22,53;UBERON:0002780,7.91e-19,41;UBERON:0001890,7.91e-19,41;UBERON:0003080,7.91e-19,41;UBERON:0006240,7.91e-19,41;UBERON:0003528,1.56e-16,34;UBERON:0002020,1.56e-16,34;UBERON:0001017,7.56e-16,81;UBERON:0007023,4.51e-15,114;UBERON:0000955,4.89e-15,68;UBERON:0006238,4.89e-15,68;UBERON:0003075,1.16e-14,82;UBERON:0007284,1.16e-14,82;UBERON:0002791,3.11e-14,32;UBERON:0002346,1.46e-13,86;UBERON:0001016,2.34e-13,89;UBERON:0001893,4.02e-13,34;UBERON:0001869,1.81e-12,32;UBERON:0002420,6.37e-12,9;UBERON:0007245,6.37e-12,9;UBERON:0010009,6.37e-12,9;UBERON:0010011,6.37e-12,9;UBERON:0000454,6.37e-12,9;UBERON:0000125,7.42e-12,9;UBERON:0002308,7.42e-12,9;UBERON:0002371,1.13e-11,76;UBERON:0003056,1.54e-10,61;UBERON:0010371,1.77e-10,104;UBERON:0001474,2.86e-10,82;UBERON:0002619,1.01e-09,22;UBERON:0009663,5.32e-09,7;UBERON:0004765,1.04e-08,90;UBERON:0010314,2.09e-08,132;UBERON:0000956,3.02e-08,25;UBERON:0000203,3.02e-08,25;UBERON:0002405,3.35e-08,93;UBERON:0003076,3.42e-08,15;UBERON:0003057,3.42e-08,15;UBERON:0001894,4.97e-08,7;UBERON:0006222,4.97e-08,7;UBERON:0001434,7.71e-08,100;UBERON:0001950,1.65e-07,20;UBERON:0002390,1.98e-07,98;UBERON:0003061,1.98e-07,98;UBERON:0002784,3.81e-07,4 | |||
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| ||
|short_description=p1@CSF2RA | |||
}} | }} |
Latest revision as of 17:02, 19 September 2015
Short description: | p1@CSF2RA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CSF2RA_5end |
Coexpression cluster: | C865_CD14_Neutrophils_Dendritic_placenta_cervical_epitheloid_spinal |
Association with transcript: | 0bp_to_ENST00000381524, ENST00000412290, ENST00000493312_5end |
EntrezGene: | CSF2RA |
HGNC: | 2435 |
UniProt: | P15509 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid lineage restricted progenitor cell | 1.28e-14 | 66 |
granulocyte monocyte progenitor cell | 2.77e-14 | 67 |
myeloid leukocyte | 4.71e-14 | 72 |
monopoietic cell | 1.48e-13 | 59 |
monocyte | 1.48e-13 | 59 |
monoblast | 1.48e-13 | 59 |
promonocyte | 1.48e-13 | 59 |
classical monocyte | 2.66e-13 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.66e-13 | 42 |
macrophage dendritic cell progenitor | 7.02e-13 | 61 |
defensive cell | 2.70e-12 | 48 |
phagocyte | 2.70e-12 | 48 |
myeloid cell | 2.16e-10 | 108 |
common myeloid progenitor | 2.16e-10 | 108 |