FFCP PHASE1:Mm9::chr2:164374839..164374850,-: Difference between revisions
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|id=chr2:164374839..164374850,-
|short_description=p@chr2:164374839..164374850,-
|description=CAGE_peak_at_chr2:164374839..164374850,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=147 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr2:164374839..164374850,- | |||
|description=CAGE_peak_at_chr2:164374839..164374850,- | |||
|id=chr2:164374839..164374850,- | |||
|ontology_enrichment_celltype=CL:0000068!1.21e-08!3;CL:0002202!1.21e-08!3;CL:0000069!1.21e-08!3;CL:0002632!1.21e-08!3;CL:0002368!1.21e-08!3;CL:0000307!1.21e-08!3;CL:0000377!1.21e-08!3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000068,1.42e-12,3;CL:0002202,1.42e-12,3;CL:0000069,1.42e-12,3;CL:0002632,1.42e-12,3;CL:0002368,1.42e-12,3;CL:0000307,1.42e-12,3;CL:0000377,1.42e-12,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0005178!9.25e-28!17;UBERON:0005181!9.25e-28!17;UBERON:0002224!9.25e-28!17;UBERON:0000915!9.25e-28!17;UBERON:0008947!9.25e-28!17;UBERON:0003258!9.25e-28!17;UBERON:0002048!7.47e-21!14;UBERON:0000117!7.47e-21!14;UBERON:0000171!7.47e-21!14;UBERON:0000170!7.47e-21!14;UBERON:0005597!7.47e-21!14;UBERON:0000118!7.47e-21!14;UBERON:0005153!9.88e-17!17;UBERON:0005157!1.26e-09!27;UBERON:0000065!1.53e-09!41;UBERON:0001004!3.09e-09!42;UBERON:0003126!1.21e-08!3;UBERON:0001005!1.21e-08!3;UBERON:0007196!1.21e-08!3;UBERON:0001558!1.21e-08!3;UBERON:0000464!4.86e-07!57 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005178,6.54e-51,17;UBERON:0005181,6.54e-51,17;UBERON:0002224,6.54e-51,17;UBERON:0000915,6.54e-51,17;UBERON:0008947,6.54e-51,17;UBERON:0003258,6.54e-51,17;UBERON:0002048,1.03e-39,14;UBERON:0000117,1.03e-39,14;UBERON:0000171,1.03e-39,14;UBERON:0000170,1.03e-39,14;UBERON:0005597,1.03e-39,14;UBERON:0000118,1.03e-39,14;UBERON:0005153,1.10e-32,17;UBERON:0005157,9.37e-28,20;UBERON:0000065,5.93e-21,41;UBERON:0001004,1.91e-20,42;UBERON:0009569,7.46e-13,66;UBERON:0003126,1.42e-12,3;UBERON:0001005,1.42e-12,3;UBERON:0007196,1.42e-12,3;UBERON:0001558,1.42e-12,3;UBERON:0005177,1.18e-10,79;UBERON:0001041,1.63e-10,80;UBERON:0002100,2.78e-09,90;UBERON:0005911,8.89e-08,69;UBERON:0004921,3.40e-07,114;UBERON:0001007,4.64e-07,116;UBERON:0001555,4.64e-07,116;UBERON:0007026,4.64e-07,116;UBERON:0004119,6.28e-07,118;UBERON:0000925,6.28e-07,118;UBERON:0006595,6.28e-07,118 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,2.59789249213457,1.52015919285059,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,7.39012760666419,0,0,0.169745085775188,0,0.837531287209079,0.238043640886014,1.17080188714679,1.89162172927429,1.99318220683897,1.2756381492599,2.62181303545181,4.31712454664739,7.5217510462386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.595303031057488,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219686182734472,0.194429899074283,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.127687338085188,0,0,0,0,0,0,0.15279824777681,0,0,0,0,0,0,0,0,0,0,0,0.280888840263504,0,0,0,0,0,0,0,2.59789249213457,1.52015919285059,0.505524445014783,0.22836775943812,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.251335208800269,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.372140947668503,0,0,0,0,7.39012760666419,0,0,0.169745085775188,0,0.837531287209079,0.238043640886014,1.17080188714679,1.89162172927429,1.99318220683897,1.2756381492599,2.62181303545181,4.31712454664739,7.5217510462386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.108005340821801,0,0,0,0.247960367176008,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.965947970160952,0,0.183151624267265,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.183843508450014,0.44449345560323,0,0.320919209591815,0,0.25347929989024,0,0,0.128050304809739,0,0,0.115884325944855,0.192909220463705,0,0,0.342869252385415,0,0,0,0,0,0,0.263069711437843,0.135804113845862,0,0,0,0,0,0,0,0,0.214871054048298,0,0,0 | ||
|short_description=p@chr2:164374839..164374850,- | |||
}} | }} |
Latest revision as of 12:39, 4 August 2015
Short description: | p@chr2:164374839..164374850, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr2:164374839..164374850, - |
Coexpression cluster: | MCL_coexpression_mm9:147 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
duct epithelial cell | 1.42e-12 | 3 |
epithelial cell of tracheobronchial tree | 1.42e-12 | 3 |
branched duct epithelial cell | 1.42e-12 | 3 |
epithelial cell of lower respiratory tract | 1.42e-12 | 3 |
respiratory epithelial cell | 1.42e-12 | 3 |
tracheal epithelial cell | 1.42e-12 | 3 |
tracheoblast | 1.42e-12 | 3 |
Ontology term | p-value | n |
---|---|---|
thoracic cavity element | 6.54e-51 | 17 |
thoracic segment organ | 6.54e-51 | 17 |
thoracic cavity | 6.54e-51 | 17 |
thoracic segment of trunk | 6.54e-51 | 17 |
respiratory primordium | 6.54e-51 | 17 |
endoderm of foregut | 6.54e-51 | 17 |
lung | 1.03e-39 | 14 |
respiratory tube | 1.03e-39 | 14 |
respiration organ | 1.03e-39 | 14 |
pair of lungs | 1.03e-39 | 14 |
lung primordium | 1.03e-39 | 14 |
lung bud | 1.03e-39 | 14 |
epithelial bud | 1.10e-32 | 17 |
epithelial fold | 9.37e-28 | 20 |
respiratory tract | 5.93e-21 | 41 |
respiratory system | 1.91e-20 | 42 |
subdivision of trunk | 7.46e-13 | 66 |
trachea | 1.42e-12 | 3 |
respiratory airway | 1.42e-12 | 3 |
tracheobronchial tree | 1.42e-12 | 3 |
lower respiratory tract | 1.42e-12 | 3 |
trunk region element | 1.18e-10 | 79 |
foregut | 1.63e-10 | 80 |
trunk | 2.78e-09 | 90 |
endo-epithelium | 8.89e-08 | 69 |
subdivision of digestive tract | 3.40e-07 | 114 |
digestive system | 4.64e-07 | 116 |
digestive tract | 4.64e-07 | 116 |
primitive gut | 4.64e-07 | 116 |
endoderm-derived structure | 6.28e-07 | 118 |
endoderm | 6.28e-07 | 118 |
presumptive endoderm | 6.28e-07 | 118 |