FFCP PHASE1:Mm9::chr5:135442349..135442362,-: Difference between revisions
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|id=chr5:135442349..135442362,-
|short_description=p@chr5:135442349..135442362,-
|description=CAGE_peak_at_chr5:135442349..135442362,-
|association_with_transcript=...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=NA | ||
| | |DPIdataset=NA | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|HGNC= | |HGNC= | ||
|MCL_coexpression_id=88 | |||
|TSSclassifier=NA | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr5:135442349..135442362,- | |||
|description=CAGE_peak_at_chr5:135442349..135442362,- | |||
|id=chr5:135442349..135442362,- | |||
|ontology_enrichment_celltype=CL:0002563!5.58e-13!9;CL:0002251!5.58e-13!9;CL:0000066!1.11e-10!25;CL:0002076!6.98e-10!15;CL:0000075!1.20e-09!7;CL:0000239!3.22e-09!6;CL:0000677!3.22e-09!6;CL:0000212!3.22e-09!6;CL:0000584!3.22e-09!6;CL:0000223!7.90e-08!20 | |||
|ontology_enrichment_celltype_v019_2=CL:0002563,7.31e-45,9;CL:0002251,7.31e-45,9;CL:0000239,1.57e-30,6;CL:0000677,1.57e-30,6;CL:0000584,1.57e-30,6;CL:0002076,1.71e-26,15;CL:0000075,3.99e-26,7;CL:0000066,3.66e-23,25;CL:0000223,1.38e-19,20;CL:0002250,8.21e-16,3;CL:0000682,1.13e-07,3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000344!7.13e-20!15;UBERON:0001242!1.52e-17!13;UBERON:0000060!1.52e-17!13;UBERON:0001262!1.52e-17!13;UBERON:0004786!1.52e-17!13;UBERON:0000160!6.24e-17!43;UBERON:0001007!5.95e-14!128;UBERON:0001555!5.95e-14!128;UBERON:0007026!5.95e-14!128;UBERON:0004119!1.69e-13!130;UBERON:0000925!1.69e-13!130;UBERON:0006595!1.69e-13!130;UBERON:0003350!5.58e-13!9;UBERON:0004808!5.58e-13!9;UBERON:0001277!5.58e-13!9;UBERON:0005409!1.12e-12!59;UBERON:0004921!1.61e-12!126;UBERON:0004185!1.61e-12!126;UBERON:0000485!6.60e-12!11;UBERON:0004923!7.49e-12!24 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000344,1.94e-62,15;UBERON:0001242,1.50e-53,13;UBERON:0001262,1.50e-53,13;UBERON:0004786,1.50e-53,13;UBERON:0003350,7.31e-45,9;UBERON:0004808,7.31e-45,9;UBERON:0001277,7.31e-45,9;UBERON:0004923,2.39e-38,24;UBERON:0000485,1.61e-36,11;UBERON:0000160,2.42e-25,31;UBERON:0005409,8.29e-19,47;UBERON:0001962,3.30e-10,2;UBERON:0001961,3.30e-10,2;UBERON:0001744,3.30e-10,2;UBERON:0001007,1.15e-08,116;UBERON:0001555,1.15e-08,116;UBERON:0007026,1.15e-08,116;UBERON:0004119,1.77e-08,118;UBERON:0000925,1.77e-08,118;UBERON:0006595,1.77e-08,118;UBERON:0000331,4.00e-07,3;UBERON:0002116,4.00e-07,3;UBERON:0001204,4.00e-07,3;UBERON:0001168,4.00e-07,3;UBERON:0002465,4.30e-07,3 | |||
|phase1_expression=0,7.32848356042658,5.91499011206397,13.0059610861937,15.0268718983904,1.84667199103079,3.03696432774183,0.387369970324729,0,0.468129052643987,0,0.159544317990673,0.342401459862411,0.437102012094987,0,0,0,0,0,0,0,0,0,1.27993938234725,1.14704640533585,3.44539178469012,0.86152399231815,3.23206849028834,1.14014051673824,0.756090389279792,1.33038306393183,0,0,0,4.04392267651784,1.82858109894342,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.864552199498777,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0,0.157635144106191,0,0,0.327726629431476,0,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.665957860122194,0.538283139656854,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | |phase1_expression=0,7.32848356042658,5.91499011206397,13.0059610861937,15.0268718983904,1.84667199103079,3.03696432774183,0.387369970324729,0,0.468129052643987,0,0.159544317990673,0.342401459862411,0.437102012094987,0,0,0,0,0,0,0,0,0,1.27993938234725,1.14704640533585,3.44539178469012,0.86152399231815,3.23206849028834,1.14014051673824,0.756090389279792,1.33038306393183,0,0,0,4.04392267651784,1.82858109894342,8.5751129630195,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289864488701678,0,0,0,0,0,0,0,0,0,0.14084341977668,0,0,0,0.649473123033642,0.253359865475099,0,0.11418387971906,0,0,0,0,0,0,0,0,0.247194967734374,0,0,0,0,0,1.86391761218122,0,0,0.255457055208591,0.11981512450592,0,0,0,0,0,0,0,0,0,0,0,0.252722758433675,0,0,0,0,0,0,0,0,0.258703370739016,0,0,0,0.219195732427575,0,0,0.205782136407943,0,0,0,0,0,0,0,0,0,0.154267112887378,0,0,0,0,0,0,0,0,0,0,0,1.32167513193519,0.528901133327089,0,0.232236671860439,0.128867461322093,0,0.667134131534611,0.190225626112559,0.474529061544512,0.329397909448022,0.251335208800269,0,0.19496408711912,0,0.864552199498777,0.597423819763102,0,0,0,0,0,0,0.0632365371242573,0,0,0,0.296452627087149,0,0,0,0,0,0,0,0,0.274561413188081,0,0,0,0.252578877947112,0,0,0.184753190166605,0,0.162964976442026,0,0,0.335012514883631,0.476087281772027,0,0.157635144106191,0,0,0.327726629431476,0,0.578596234326046,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.164970122972535,0,0,0,0,0,0,0,0,0.356497378384721,0,0,0,0,0,0,0,0,0,0,0,0,0,0.441056796109924,0.16488625294148,0,0,0.119372344003136,0,0.291480836629851,0,0,0,0,0,0,0,0.169978429993855,0,0,0,0,0,0.108005340821801,0,0,0,0.0826534557253359,0,2.33306951925227,0,0,0,0,0,0,0,0,0,0,0,0.288030006257865,0,0,0,0,0,0,0.120195449519969,0,0.100966449948148,0,0,0,0,0.116876902181569,0,0.665957860122194,0.538283139656854,0.167884616364078,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.222246727801615,0.206035057238894,0,0,0,0,0,0.128050304809739,0.0574354689556133,0,0,0,0,0,0,0,0,0,0,0,0.182927972872773,0,0,0,0,0,0,0,0,0.249810577937946,0.233931608445408,0,0,0,0 | ||
|short_description=p@chr5:135442349..135442362,- | |||
}} | }} |
Latest revision as of 09:59, 6 August 2015
Short description: | p@chr5:135442349..135442362, - |
---|---|
Species: | Mouse (Mus musculus) |
DPI dataset: | NA |
TSS-like-by-RIKEN-classifier(Yes/No): | NA |
DHS support(Yes/No): | NA |
Description: | CAGE_peak_at_chr5:135442349..135442362, - |
Coexpression cluster: | MCL_coexpression_mm9:88 |
Association with transcript: | NA |
EntrezGene: | NA |
Link to Zenbu: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
intestinal epithelial cell | 7.31e-45 | 9 |
epithelial cell of alimentary canal | 7.31e-45 | 9 |
brush border epithelial cell | 1.57e-30 | 6 |
gut absorptive cell | 1.57e-30 | 6 |
enterocyte | 1.57e-30 | 6 |
endo-epithelial cell | 1.71e-26 | 15 |
columnar/cuboidal epithelial cell | 3.99e-26 | 7 |
epithelial cell | 3.66e-23 | 25 |
endodermal cell | 1.38e-19 | 20 |
intestinal crypt stem cell | 8.21e-16 | 3 |
M cell of gut | 1.13e-07 | 3 |
Ontology term | p-value | n |
---|---|---|
mucosa | 1.94e-62 | 15 |
intestinal mucosa | 1.50e-53 | 13 |
wall of intestine | 1.50e-53 | 13 |
gastrointestinal system mucosa | 1.50e-53 | 13 |
epithelium of mucosa | 7.31e-45 | 9 |
gastrointestinal system epithelium | 7.31e-45 | 9 |
intestinal epithelium | 7.31e-45 | 9 |
organ component layer | 2.39e-38 | 24 |
simple columnar epithelium | 1.61e-36 | 11 |
intestine | 2.42e-25 | 31 |
gastrointestinal system | 8.29e-19 | 47 |
gut-associated lymphoid tissue | 3.30e-10 | 2 |
mucosa-associated lymphoid tissue | 3.30e-10 | 2 |
lymphoid tissue | 3.30e-10 | 2 |
digestive system | 1.15e-08 | 116 |
digestive tract | 1.15e-08 | 116 |
primitive gut | 1.15e-08 | 116 |
endoderm-derived structure | 1.77e-08 | 118 |
endoderm | 1.77e-08 | 118 |
presumptive endoderm | 1.77e-08 | 118 |
ileal mucosa | 4.00e-07 | 3 |
ileum | 4.00e-07 | 3 |
mucosa of small intestine | 4.00e-07 | 3 |
wall of small intestine | 4.00e-07 | 3 |
lymphoid system | 4.30e-07 | 3 |