FFCP PHASE1:Hg19::chr10:14614051..14614062,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:14614051..14614062,- to FFCP PHASE1:Hg19::chr10:14614051..14614062,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=83641 | |EntrezGene=83641 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23726 | |HGNC=23726 | ||
|TSSclassifier=strong | |||
|UniProt=C9JYP1 | |UniProt=C9JYP1 | ||
|association_with_transcript=-20bp_to_ENST00000472095_5end | |||
|cluster_id=chr10:14614051..14614062,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_13_at_FAM107B_5end | |||
|id=chr10:14614051..14614062,- | |||
|ontology_enrichment_celltype=CL:0000791!7.09e-24!18;CL:0000789!7.09e-24!18;CL:0002420!7.09e-24!18;CL:0002419!7.09e-24!18;CL:0000790!7.09e-24!18;CL:0000084!1.40e-20!25;CL:0000827!1.40e-20!25;CL:0000625!1.77e-18!11;CL:0000624!9.61e-09!6;CL:0000838!1.08e-08!52;CL:0000542!1.91e-08!53;CL:0000051!1.91e-08!53 | |||
|ontology_enrichment_celltype_v019=CL:0000625;8.19e-11;11!CL:0000791;3.65e-09;18!CL:0000789;3.65e-09;18!CL:0002419;3.65e-09;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000625,7.77e-11,11;CL:0000791,3.66e-09,18;CL:0000789,3.66e-09,18;CL:0002420,3.66e-09,18;CL:0002419,3.66e-09,18;CL:0000790,3.66e-09,18 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.80e-16;82!CL:0000790;3.65e-09;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!9.62e-55!57;UBERON:0005068!9.62e-55!57;UBERON:0006241!9.62e-55!57;UBERON:0007135!9.62e-55!57;UBERON:0002616!3.45e-44!59;UBERON:0007023!1.32e-43!115;UBERON:0002780!7.53e-43!41;UBERON:0001890!7.53e-43!41;UBERON:0006240!7.53e-43!41;UBERON:0002020!4.19e-42!34;UBERON:0003528!4.19e-42!34;UBERON:0001893!4.80e-42!34;UBERON:0003080!1.25e-41!42;UBERON:0002791!4.88e-40!33;UBERON:0001017!4.57e-38!82;UBERON:0001869!7.77e-38!32;UBERON:0000955!8.04e-38!69;UBERON:0006238!8.04e-38!69;UBERON:0005743!9.51e-36!86;UBERON:0003075!2.92e-34!86;UBERON:0007284!2.92e-34!86;UBERON:0000073!3.52e-33!94;UBERON:0001016!3.52e-33!94;UBERON:0002346!3.34e-32!90;UBERON:0002619!5.19e-28!22;UBERON:0003056!5.70e-26!61;UBERON:0001950!2.47e-24!20;UBERON:0000956!3.69e-24!25;UBERON:0000203!3.69e-24!25;UBERON:0002308!3.92e-21!9;UBERON:0000125!3.92e-21!9;UBERON:0000153!1.07e-20!129;UBERON:0007811!1.07e-20!129;UBERON:0002420!1.72e-20!9;UBERON:0007245!1.72e-20!9;UBERON:0010009!1.72e-20!9;UBERON:0010011!1.72e-20!9;UBERON:0000454!1.72e-20!9;UBERON:0000033!8.59e-19!123;UBERON:0009663!1.04e-16!7;UBERON:0002298!1.94e-14!8;UBERON:0004121!4.29e-14!169;UBERON:0003076!9.11e-14!15;UBERON:0003057!9.11e-14!15;UBERON:0000200!9.40e-14!6;UBERON:0000924!1.67e-13!173;UBERON:0006601!1.67e-13!173;UBERON:0000349!2.12e-11!5;UBERON:0000025!9.30e-11!194;UBERON:0004732!1.17e-10!13;UBERON:0000369!3.89e-10!4;UBERON:0002435!3.89e-10!4;UBERON:0000204!3.89e-10!4;UBERON:0010082!3.89e-10!4;UBERON:0001871!9.05e-10!7;UBERON:0004733!6.98e-09!12;UBERON:0002028!6.98e-09!12;UBERON:0007277!6.98e-09!12;UBERON:0006331!2.59e-08!3;UBERON:0000988!3.05e-08!3;UBERON:0005383!4.63e-08!3;UBERON:0005382!4.63e-08!3;UBERON:0001872!5.23e-08!5;UBERON:0001896!6.10e-08!3;UBERON:0005290!6.10e-08!3;UBERON:0010096!6.10e-08!3;UBERON:0002771!1.40e-07!3;UBERON:0004111!1.44e-07!241;UBERON:0002240!2.14e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;8.37e-43;34!UBERON:0002020;8.37e-43;34!UBERON:0001893;7.00e-41;34!UBERON:0000125;2.36e-35;9!UBERON:0002308;2.36e-35;9!UBERON:0000073;5.09e-35;53!UBERON:0002616;5.09e-35;53!UBERON:0002791;8.75e-35;32!UBERON:0001869;1.28e-34;32!UBERON:0002780;7.63e-34;41!UBERON:0001890;7.63e-34;41!UBERON:0002298;1.47e-29;6!UBERON:0009663;6.67e-26;7!UBERON:0001017;1.80e-23;75!UBERON:0002619;2.81e-23;22!UBERON:0001950;2.95e-21;20!UBERON:0000956;2.41e-20;25!UBERON:0000203;2.41e-20;25!UBERON:0000955;2.80e-20;68!UBERON:0002420;5.08e-20;9!UBERON:0007245;5.08e-20;9!UBERON:0010009;5.08e-20;9!UBERON:0010011;5.08e-20;9!UBERON:0000454;5.08e-20;9!UBERON:0000200;7.48e-20;6!UBERON:0004732;4.01e-18;13!UBERON:0001016;6.51e-18;83!UBERON:0001872;4.56e-16;5!UBERON:0000988;6.02e-16;3!UBERON:0001896;2.15e-15;3!UBERON:0005290;2.15e-15;3!UBERON:0004733;1.67e-14;12!UBERON:0002028;1.67e-14;12!UBERON:0007023;7.70e-13;114!UBERON:0000369;3.63e-12;4!UBERON:0002435;3.63e-12;4!UBERON:0000204;3.63e-12;4!UBERON:0001897;1.26e-11;2!UBERON:0010225;1.26e-11;2!UBERON:0005162;1.47e-11;2!UBERON:0000122;1.47e-11;2!UBERON:0002148;2.28e-11;2!UBERON:0006331;2.28e-11;2!UBERON:0009662;2.28e-11;2!UBERON:0001875;2.79e-11;2!UBERON:0006514;2.79e-11;2!UBERON:0002771;1.22e-10;2!UBERON:0005383;6.34e-08;3!UBERON:0005382;6.34e-08;3!UBERON:0001870;1.75e-07;3!UBERON:0001894;4.41e-07;7!UBERON:0011216;7.61e-07;132 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,3.09e-67,56;UBERON:0005068,3.09e-67,56;UBERON:0006241,3.09e-67,56;UBERON:0007135,3.09e-67,56;UBERON:0000073,5.31e-66,53;UBERON:0002616,5.31e-66,53;UBERON:0000955,2.46e-53,68;UBERON:0006238,2.46e-53,68;UBERON:0002780,4.28e-52,41;UBERON:0001890,4.28e-52,41;UBERON:0003080,4.28e-52,41;UBERON:0006240,4.28e-52,41;UBERON:0001017,6.55e-51,81;UBERON:0001016,1.16e-48,89;UBERON:0003075,1.09e-47,82;UBERON:0007284,1.09e-47,82;UBERON:0003528,1.33e-46,34;UBERON:0002020,1.33e-46,34;UBERON:0001893,1.64e-46,34;UBERON:0002346,3.39e-45,86;UBERON:0007023,1.26e-40,114;UBERON:0002791,3.52e-39,32;UBERON:0001869,4.64e-39,32;UBERON:0003056,3.84e-37,61;UBERON:0010371,2.48e-36,104;UBERON:0000125,2.03e-35,9;UBERON:0002308,2.03e-35,9;UBERON:0002298,1.24e-29,6;UBERON:0010314,2.08e-29,132;UBERON:0009663,6.14e-26,7;UBERON:0002619,3.70e-23,22;UBERON:0004121,1.57e-22,171;UBERON:0000924,1.57e-22,171;UBERON:0006601,1.57e-22,171;UBERON:0001950,3.74e-21,20;UBERON:0000956,3.06e-20,25;UBERON:0000203,3.06e-20,25;UBERON:0002420,4.77e-20,9;UBERON:0007245,4.77e-20,9;UBERON:0010009,4.77e-20,9;UBERON:0010011,4.77e-20,9;UBERON:0000454,4.77e-20,9;UBERON:0000200,5.77e-20,6;UBERON:0004732,3.67e-18,13;UBERON:0011216,5.96e-17,223;UBERON:0000988,4.93e-16,3;UBERON:0001872,5.45e-16,5;UBERON:0003076,1.10e-15,15;UBERON:0003057,1.10e-15,15;UBERON:0001896,2.20e-15,3;UBERON:0005290,2.20e-15,3;UBERON:0010096,2.20e-15,3;UBERON:0000025,2.26e-15,192;UBERON:0004733,1.54e-14,12;UBERON:0002028,1.54e-14,12;UBERON:0007277,1.54e-14,12;UBERON:0000369,3.63e-12,4;UBERON:0002435,3.63e-12,4;UBERON:0000204,3.63e-12,4;UBERON:0010082,3.63e-12,4;UBERON:0001897,1.33e-11,2;UBERON:0010225,1.33e-11,2;UBERON:0005162,1.47e-11,2;UBERON:0000122,1.47e-11,2;UBERON:0002148,2.11e-11,2;UBERON:0006331,2.11e-11,2;UBERON:0009662,2.11e-11,2;UBERON:0001875,2.73e-11,2;UBERON:0006514,2.73e-11,2;UBERON:0004111,4.74e-11,240;UBERON:0002771,1.42e-10,2;UBERON:0000483,3.80e-08,306;UBERON:0000119,5.25e-08,309;UBERON:0005383,5.64e-08,3;UBERON:0005382,5.64e-08,3;UBERON:0001870,1.59e-07,3;UBERON:0001894,3.85e-07,7;UBERON:0006222,3.85e-07,7 | |||
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|short_description=p13@FAM107B | |||
}} | }} |
Latest revision as of 07:39, 17 September 2015
Short description: | p13@FAM107B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_13_at_FAM107B_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | -20bp_to_ENST00000472095_5end |
EntrezGene: | FAM107B |
HGNC: | 23726 |
UniProt: | C9JYP1 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
CD8-positive, alpha-beta T cell | 7.77e-11 | 11 |
mature alpha-beta T cell | 3.66e-09 | 18 |
alpha-beta T cell | 3.66e-09 | 18 |
immature T cell | 3.66e-09 | 18 |
mature T cell | 3.66e-09 | 18 |
immature alpha-beta T cell | 3.66e-09 | 18 |