FFCP PHASE1:Hg19::chr10:98118687..98118699,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr10:98118687..98118699,- to FFCP PHASE1:Hg19::chr10:98118687..98118699,-: NSchange) |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=93377 | |EntrezGene=93377 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20707 | |HGNC=20707 | ||
|TSSclassifier=strong | |||
|UniProt=A8MX69 | |UniProt=A8MX69 | ||
|association_with_transcript=38bp_to_ENST00000393870_5end | |||
|cluster_id=chr10:98118687..98118699,- | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_5_at_OPALIN_5end | |||
|id=chr10:98118687..98118699,- | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.10e-23;82!UBERON:0010122;8.59e-10;2!UBERON:0002532;3.09e-07;206!UBERON:0010316;3.09e-07;206 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!3.85e-116!57;UBERON:0005068!3.85e-116!57;UBERON:0006241!3.85e-116!57;UBERON:0007135!3.85e-116!57;UBERON:0002616!2.96e-96!59;UBERON:0001017!2.03e-94!82;UBERON:0005743!1.04e-89!86;UBERON:0000955!1.95e-89!69;UBERON:0006238!1.95e-89!69;UBERON:0002780!1.08e-88!41;UBERON:0001890!1.08e-88!41;UBERON:0006240!1.08e-88!41;UBERON:0001893!7.65e-87!34;UBERON:0003080!1.87e-86!42;UBERON:0002020!4.44e-86!34;UBERON:0003528!4.44e-86!34;UBERON:0002791!5.81e-83!33;UBERON:0003075!3.84e-82!86;UBERON:0007284!3.84e-82!86;UBERON:0000073!1.57e-80!94;UBERON:0001016!1.57e-80!94;UBERON:0001869!3.82e-79!32;UBERON:0002346!3.94e-78!90;UBERON:0007023!1.17e-66!115;UBERON:0002619!9.61e-61!22;UBERON:0003056!1.22e-57!61;UBERON:0001950!2.69e-53!20;UBERON:0000956!3.50e-53!25;UBERON:0000203!3.50e-53!25;UBERON:0000033!1.30e-49!123;UBERON:0000153!6.35e-47!129;UBERON:0007811!6.35e-47!129;UBERON:0004121!2.37e-41!169;UBERON:0000924!3.38e-40!173;UBERON:0006601!3.38e-40!173;UBERON:0002420!1.16e-35!9;UBERON:0007245!1.16e-35!9;UBERON:0010009!1.16e-35!9;UBERON:0010011!1.16e-35!9;UBERON:0000454!1.16e-35!9;UBERON:0002308!1.96e-35!9;UBERON:0000125!1.96e-35!9;UBERON:0000025!8.16e-30!194;UBERON:0003076!6.57e-29!15;UBERON:0003057!6.57e-29!15;UBERON:0009663!2.71e-28!7;UBERON:0000200!2.58e-24!6;UBERON:0002298!2.51e-23!8;UBERON:0004111!3.16e-22!241;UBERON:0000349!1.04e-20!5;UBERON:0004733!1.55e-19!12;UBERON:0002028!1.55e-19!12;UBERON:0007277!1.55e-19!12;UBERON:0000477!1.84e-18!286;UBERON:0001871!4.37e-18!7;UBERON:0004732!6.13e-18!13;UBERON:0000483!2.03e-17!309;UBERON:0000119!3.67e-17!312;UBERON:0000369!1.03e-16!4;UBERON:0002435!1.03e-16!4;UBERON:0000204!1.03e-16!4;UBERON:0010082!1.03e-16!4;UBERON:0000064!1.01e-14!219;UBERON:0000475!2.44e-14!365;UBERON:0001872!1.02e-13!5;UBERON:0002021!1.02e-13!5;UBERON:0002771!7.09e-13!3;UBERON:0005383!1.15e-12!3;UBERON:0005382!1.15e-12!3;UBERON:0000988!1.59e-12!3;UBERON:0006331!1.72e-12!3;UBERON:0001896!2.11e-12!3;UBERON:0005290!2.11e-12!3;UBERON:0010096!2.11e-12!3;UBERON:0002240!5.23e-12!3;UBERON:0002680!1.32e-10!9;UBERON:0001895!1.32e-10!9;UBERON:0010092!1.32e-10!9;UBERON:0001875!1.01e-09!2;UBERON:0006514!1.01e-09!2;UBERON:0001897!1.35e-09!2;UBERON:0000062!1.70e-09!511;UBERON:0001870!2.64e-09!2;UBERON:0001954!2.75e-09!2;UBERON:0003022!2.75e-09!2;UBERON:0002421!2.75e-09!2;UBERON:0002600!2.75e-09!2;UBERON:0001873!3.83e-09!2;UBERON:0010122!3.83e-09!2;UBERON:0001876!4.33e-09!2;UBERON:0002148!7.33e-09!2;UBERON:0009662!7.33e-09!2;UBERON:0002360!1.19e-08!2;UBERON:0000094!1.19e-08!2;UBERON:0007645!1.19e-08!2;UBERON:0005174!2.16e-07!5;UBERON:0001137!2.16e-07!5;UBERON:0000481!4.94e-07!347 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.48e-80;34!UBERON:0003528;6.84e-78;34!UBERON:0002020;6.84e-78;34!UBERON:0001869;2.92e-76;32!UBERON:0002791;4.69e-76;32!UBERON:0002780;8.89e-68;41!UBERON:0001890;8.89e-68;41!UBERON:0002619;9.85e-66;22!UBERON:0000073;1.11e-61;53!UBERON:0002616;1.11e-61;53!UBERON:0001950;1.23e-57;20!UBERON:0000956;1.29e-57;25!UBERON:0000203;1.29e-57;25!UBERON:0000955;3.96e-41;68!UBERON:0001017;5.06e-39;75!UBERON:0002420;1.93e-38;9!UBERON:0007245;1.93e-38;9!UBERON:0010009;1.93e-38;9!UBERON:0010011;1.93e-38;9!UBERON:0000454;1.93e-38;9!UBERON:0000125;3.27e-38;9!UBERON:0002308;3.27e-38;9!UBERON:0009663;1.72e-30;7!UBERON:0001016;1.08e-28;83!UBERON:0000200;3.85e-26;6!UBERON:0002298;5.98e-25;6!UBERON:0000349;2.84e-22;5!UBERON:0007023;8.85e-19;114!UBERON:0000369;5.79e-18;4!UBERON:0002435;5.79e-18;4!UBERON:0000204;5.79e-18;4!UBERON:0004733;2.43e-16;12!UBERON:0002028;2.43e-16;12!UBERON:0001871;1.05e-15;6!UBERON:0004732;5.13e-15;13!UBERON:0001872;9.79e-15;5!UBERON:0002021;9.96e-15;5!UBERON:0001870;4.81e-14;3!UBERON:0005383;1.35e-13;3!UBERON:0005382;1.35e-13;3!UBERON:0000988;1.96e-13;3!UBERON:0001896;2.83e-13;3!UBERON:0005290;2.83e-13;3!UBERON:0011216;2.65e-12;132!UBERON:0001875;2.17e-10;2!UBERON:0006514;2.17e-10;2!UBERON:0001897;3.42e-10;2!UBERON:0010225;3.42e-10;2!UBERON:0001954;5.88e-10;2!UBERON:0003022;5.88e-10;2!UBERON:0002421;5.88e-10;2!UBERON:0002600;5.88e-10;2!UBERON:0001873;8.59e-10;2!UBERON:0002771;1.05e-09;2!UBERON:0001876;1.12e-09;2!UBERON:0002702;1.37e-09;2!UBERON:0002148;1.90e-09;2!UBERON:0006331;1.90e-09;2!UBERON:0009662;1.90e-09;2!UBERON:0010314;5.32e-09;132!UBERON:0002680;1.13e-07;9!UBERON:0001895;1.13e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.38e-116,56;UBERON:0005068,2.38e-116,56;UBERON:0006241,2.38e-116,56;UBERON:0007135,2.38e-116,56;UBERON:0000073,4.23e-111,53;UBERON:0002616,4.23e-111,53;UBERON:0002780,4.22e-96,41;UBERON:0001890,4.22e-96,41;UBERON:0003080,4.22e-96,41;UBERON:0006240,4.22e-96,41;UBERON:0001893,5.33e-94,34;UBERON:0000955,5.66e-94,68;UBERON:0006238,5.66e-94,68;UBERON:0003528,3.58e-93,34;UBERON:0002020,3.58e-93,34;UBERON:0001017,9.62e-91,81;UBERON:0001869,1.14e-85,32;UBERON:0002791,2.08e-85,32;UBERON:0001016,4.68e-81,89;UBERON:0003075,2.30e-77,82;UBERON:0007284,2.30e-77,82;UBERON:0002346,1.97e-73,86;UBERON:0002619,1.12e-65,22;UBERON:0007023,8.04e-64,114;UBERON:0003056,8.56e-63,61;UBERON:0010371,1.93e-59,104;UBERON:0001950,1.28e-57,20;UBERON:0000956,1.44e-57,25;UBERON:0000203,1.44e-57,25;UBERON:0010314,7.62e-48,132;UBERON:0004121,6.70e-39,171;UBERON:0000924,6.70e-39,171;UBERON:0006601,6.70e-39,171;UBERON:0002420,2.02e-38,9;UBERON:0007245,2.02e-38,9;UBERON:0010009,2.02e-38,9;UBERON:0010011,2.02e-38,9;UBERON:0000454,2.02e-38,9;UBERON:0000125,3.58e-38,9;UBERON:0002308,3.58e-38,9;UBERON:0011216,3.77e-31,223;UBERON:0009663,1.88e-30,7;UBERON:0000025,2.86e-30,192;UBERON:0000200,3.77e-26,6;UBERON:0002298,6.38e-25,6;UBERON:0004111,1.47e-22,240;UBERON:0000349,2.97e-22,5;UBERON:0003076,4.78e-21,15;UBERON:0003057,4.78e-21,15;UBERON:0000369,6.19e-18,4;UBERON:0002435,6.19e-18,4;UBERON:0000204,6.19e-18,4;UBERON:0010082,6.19e-18,4;UBERON:0004733,2.52e-16,12;UBERON:0002028,2.52e-16,12;UBERON:0007277,2.52e-16,12;UBERON:0000483,7.07e-16,306;UBERON:0001871,1.01e-15,6;UBERON:0000119,1.22e-15,309;UBERON:0004732,5.30e-15,13;UBERON:0001872,9.96e-15,5;UBERON:0002021,9.96e-15,5;UBERON:0001870,5.38e-14,3;UBERON:0005383,1.48e-13,3;UBERON:0005382,1.48e-13,3;UBERON:0000988,2.09e-13,3;UBERON:0001896,2.83e-13,3;UBERON:0005290,2.83e-13,3;UBERON:0010096,2.83e-13,3;UBERON:0001875,2.22e-10,2;UBERON:0006514,2.22e-10,2;UBERON:0001897,3.06e-10,2;UBERON:0010225,3.06e-10,2;UBERON:0001954,6.58e-10,2;UBERON:0003022,6.58e-10,2;UBERON:0002421,6.58e-10,2;UBERON:0002600,6.58e-10,2;UBERON:0001873,9.39e-10,2;UBERON:0010122,9.39e-10,2;UBERON:0002771,1.03e-09,2;UBERON:0001876,1.07e-09,2;UBERON:0002702,1.52e-09,2;UBERON:0002148,1.90e-09,2;UBERON:0006331,1.90e-09,2;UBERON:0009662,1.90e-09,2;UBERON:0002680,1.16e-07,9;UBERON:0001895,1.16e-07,9;UBERON:0010092,1.16e-07,9;UBERON:0000923,3.41e-07,560;UBERON:0010316,3.41e-07,560;UBERON:0005291,3.41e-07,560;UBERON:0006598,3.41e-07,560;UBERON:0010317,3.41e-07,560;UBERON:0002532,3.41e-07,560;UBERON:0002050,4.45e-07,564 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,9.84685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4173221758092,19.2029963195032,0,0,0,0,0,0,0,0,0,0,15.0576035588353,6.39161124714662,0,0.442317039724898,2.65992857058193,8.55603048900493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7900016127395,0,33.0312868472728,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5012780349251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2176521258112,14.5119701625513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9284453471395,14.0289508294923,0,0,0,0,0,14.5798935979259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49841146896993,7.80172350281871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2024772597689,6.9554970994119,12.268711209237,4.0138643698305,3.43880059764242,13.6612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1023604874765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9110597799025,9.91876034279095,10.6954685568291,17.2297745962234,0,18.0500428931609,13.0795272961799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9933437852836,12.4972495778216,8.06078506354618,15.7271209280889,0,0,0,0,0,0,0,0,0,0,0,0,9.10794421889545,21.1788330872374,0,0,0,6.59885477647208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87079634902308,1.78227840196252,0.8453114551668,0,0,0,0,0,0,0,0,0,8.17035623963272,0,23.2530896452928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7542193497168,14.5840524165272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,4.32230949142452,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.18157981336281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,9.94147647766298,9.84685914873589,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,18.4173221758092,19.2029963195032,0,0,0,0,0,0,0,0,0,0,15.0576035588353,6.39161124714662,0,0.442317039724898,2.65992857058193,8.55603048900493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,35.7900016127395,0,33.0312868472728,0,0,0,0,0,0,0.189559738885464,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,24.5012780349251,0,0,0,0,0,0,0,0,0,0,0,0,0,0,25.2176521258112,14.5119701625513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,11.9284453471395,14.0289508294923,0,0,0,0,0,14.5798935979259,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.49841146896993,7.80172350281871,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.2024772597689,6.9554970994119,12.268711209237,4.0138643698305,3.43880059764242,13.6612086471044,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.1023604874765,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,19.9110597799025,9.91876034279095,10.6954685568291,17.2297745962234,0,18.0500428931609,13.0795272961799,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.9933437852836,12.4972495778216,8.06078506354618,15.7271209280889,0,0,0,0,0,0,0,0,0,0,0,0,9.10794421889545,21.1788330872374,0,0,0,6.59885477647208,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87079634902308,1.78227840196252,0.8453114551668,0,0,0,0,0,0,0,0,0,8.17035623963272,0,23.2530896452928,0,0,0,0,0,0,0,0,0,0,0,0,0,0,15.7542193497168,14.5840524165272,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@OPALIN | |||
}} | }} |
Latest revision as of 04:59, 20 September 2015
Short description: | p5@OPALIN |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_OPALIN_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 38bp_to_ENST00000393870_5end |
EntrezGene: | OPALIN |
HGNC: | 20707 |
UniProt: | A8MX69 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data