FFCP PHASE1:Hg19::chr12:79439461..79439490,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr12:79439461..79439490,+ to FFCP PHASE1:Hg19::chr12:79439461..79439490,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=6857 | |EntrezGene=6857 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11509 | |HGNC=11509 | ||
|TSSclassifier=strong | |||
|UniProt=F8VXH0 | |UniProt=F8VXH0 | ||
|association_with_transcript=0bp_to_ENST00000552624_5end | |||
|cluster_id=chr12:79439461..79439490,+ | |||
|coexpression_cluster_id=C249 | |||
|description=CAGE_peak_2_at_SYT1_5end | |||
|id=chr12:79439461..79439490,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;6.39e-15;82!UBERON:0006215;9.72e-11;3!UBERON:0010122;1.56e-07;2 | |||
|ontology_enrichment_disease=DOID:305!2.00e-09!106 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.63e-55!57;UBERON:0005068!1.63e-55!57;UBERON:0006241!1.63e-55!57;UBERON:0007135!1.63e-55!57;UBERON:0002616!1.20e-50!59;UBERON:0000955!8.15e-48!69;UBERON:0006238!8.15e-48!69;UBERON:0001017!2.30e-46!82;UBERON:0002780!8.29e-46!41;UBERON:0001890!8.29e-46!41;UBERON:0006240!8.29e-46!41;UBERON:0005743!1.33e-45!86;UBERON:0003080!1.70e-44!42;UBERON:0001893!5.08e-43!34;UBERON:0002020!7.69e-43!34;UBERON:0003528!7.69e-43!34;UBERON:0002791!4.95e-41!33;UBERON:0000073!5.80e-40!94;UBERON:0001016!5.80e-40!94;UBERON:0001869!5.90e-40!32;UBERON:0003075!6.11e-40!86;UBERON:0007284!6.11e-40!86;UBERON:0002346!1.48e-37!90;UBERON:0007023!1.79e-34!115;UBERON:0002619!7.75e-32!22;UBERON:0003056!2.06e-31!61;UBERON:0000033!2.63e-29!123;UBERON:0001950!4.24e-28!20;UBERON:0000956!1.90e-27!25;UBERON:0000203!1.90e-27!25;UBERON:0000153!2.79e-27!129;UBERON:0007811!2.79e-27!129;UBERON:0004121!3.93e-19!169;UBERON:0000924!2.30e-18!173;UBERON:0006601!2.30e-18!173;UBERON:0002420!1.35e-17!9;UBERON:0007245!1.35e-17!9;UBERON:0010009!1.35e-17!9;UBERON:0010011!1.35e-17!9;UBERON:0000454!1.35e-17!9;UBERON:0002308!2.40e-17!9;UBERON:0000125!2.40e-17!9;UBERON:0000200!3.83e-14!6;UBERON:0009663!6.99e-14!7;UBERON:0000025!8.72e-14!194;UBERON:0004733!9.59e-13!12;UBERON:0002028!9.59e-13!12;UBERON:0007277!9.59e-13!12;UBERON:0003076!6.00e-12!15;UBERON:0003057!6.00e-12!15;UBERON:0004111!1.30e-11!241;UBERON:0004732!1.31e-11!13;UBERON:0002298!1.62e-11!8;UBERON:0000349!3.52e-11!5;UBERON:0000064!2.38e-10!219;UBERON:0001871!5.64e-10!7;UBERON:0000369!4.18e-09!4;UBERON:0002435!4.18e-09!4;UBERON:0000204!4.18e-09!4;UBERON:0010082!4.18e-09!4;UBERON:0000475!8.18e-09!365;UBERON:0000477!3.00e-08!286;UBERON:0002680!3.44e-08!9;UBERON:0001895!3.44e-08!9;UBERON:0010092!3.44e-08!9;UBERON:0002771!6.17e-08!3;UBERON:0001872!6.65e-08!5;UBERON:0002021!1.29e-07!5;UBERON:0000483!1.60e-07!309;UBERON:0000119!2.54e-07!312;UBERON:0005383!4.04e-07!3;UBERON:0005382!4.04e-07!3;UBERON:0000988!4.77e-07!3 | |||
|ontology_enrichment_uberon_v019=UBERON:0001869;2.61e-57;32!UBERON:0001893;4.57e-57;34!UBERON:0003528;2.21e-55;34!UBERON:0002020;2.21e-55;34!UBERON:0002791;4.05e-53;32!UBERON:0002619;1.19e-50;22!UBERON:0002780;2.57e-46;41!UBERON:0001890;2.57e-46;41!UBERON:0001950;1.13e-44;20!UBERON:0000956;3.38e-44;25!UBERON:0000203;3.38e-44;25!UBERON:0000073;6.22e-44;53!UBERON:0002616;6.22e-44;53!UBERON:0000955;8.38e-29;68!UBERON:0001017;1.49e-27;75!UBERON:0002420;4.85e-22;9!UBERON:0007245;4.85e-22;9!UBERON:0010009;4.85e-22;9!UBERON:0010011;4.85e-22;9!UBERON:0000454;4.85e-22;9!UBERON:0000125;1.06e-21;9!UBERON:0002308;1.06e-21;9!UBERON:0000200;1.67e-21;6!UBERON:0001016;7.52e-20;83!UBERON:0000349;8.66e-17;5!UBERON:0009663;2.96e-16;7!UBERON:0004733;5.82e-16;12!UBERON:0002028;5.82e-16;12!UBERON:0004732;1.25e-14;13!UBERON:0000369;1.54e-13;4!UBERON:0002435;1.54e-13;4!UBERON:0000204;1.54e-13;4!UBERON:0002298;5.72e-13;6!UBERON:0007023;1.20e-12;114!UBERON:0002680;1.25e-12;9!UBERON:0001895;1.25e-12;9!UBERON:0001871;2.67e-12;6!UBERON:0001872;7.39e-12;5!UBERON:0001870;9.90e-12;3!UBERON:0002021;2.14e-11;5!UBERON:0005383;2.11e-10;3!UBERON:0005382;2.11e-10;3!UBERON:0000988;2.92e-10;3!UBERON:0011216;8.93e-10;132!UBERON:0002702;1.96e-08;2!UBERON:0002771;2.60e-08;2!UBERON:0001954;9.75e-08;2!UBERON:0003022;9.75e-08;2!UBERON:0002421;9.75e-08;2!UBERON:0002600;9.75e-08;2!UBERON:0001876;1.34e-07;2!UBERON:0001873;1.56e-07;2!UBERON:0001897;1.72e-07;2!UBERON:0010225;1.72e-07;2!UBERON:0001875;3.09e-07;2!UBERON:0006514;3.09e-07;2!UBERON:0002148;3.30e-07;2!UBERON:0006331;3.30e-07;2!UBERON:0009662;3.30e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000073,2.91e-81,53;UBERON:0002616,2.91e-81,53;UBERON:0001049,1.83e-76,56;UBERON:0005068,1.83e-76,56;UBERON:0006241,1.83e-76,56;UBERON:0007135,1.83e-76,56;UBERON:0000955,1.06e-67,68;UBERON:0006238,1.06e-67,68;UBERON:0002780,7.99e-66,41;UBERON:0001890,7.99e-66,41;UBERON:0003080,7.99e-66,41;UBERON:0006240,7.99e-66,41;UBERON:0001893,8.25e-65,34;UBERON:0003528,1.57e-64,34;UBERON:0002020,1.57e-64,34;UBERON:0001869,2.83e-64,32;UBERON:0002791,4.79e-59,32;UBERON:0001017,1.19e-58,81;UBERON:0001016,6.79e-52,89;UBERON:0002619,1.15e-50,22;UBERON:0003075,2.04e-49,82;UBERON:0007284,2.04e-49,82;UBERON:0002346,1.09e-46,86;UBERON:0001950,1.09e-44,20;UBERON:0000956,3.26e-44,25;UBERON:0000203,3.26e-44,25;UBERON:0003056,5.98e-42,61;UBERON:0007023,7.56e-40,114;UBERON:0010371,5.29e-37,104;UBERON:0010314,5.25e-29,132;UBERON:0011216,8.27e-26,223;UBERON:0004121,5.56e-24,171;UBERON:0000924,5.56e-24,171;UBERON:0006601,5.56e-24,171;UBERON:0000025,3.11e-23,192;UBERON:0002420,5.68e-22,9;UBERON:0007245,5.68e-22,9;UBERON:0010009,5.68e-22,9;UBERON:0010011,5.68e-22,9;UBERON:0000454,5.68e-22,9;UBERON:0000125,1.30e-21,9;UBERON:0002308,1.30e-21,9;UBERON:0000200,1.70e-21,6;UBERON:0004111,1.53e-17,240;UBERON:0000349,8.52e-17,5;UBERON:0009663,3.49e-16,7;UBERON:0004733,5.64e-16,12;UBERON:0002028,5.64e-16,12;UBERON:0007277,5.64e-16,12;UBERON:0004732,1.21e-14,13;UBERON:0000369,1.65e-13,4;UBERON:0002435,1.65e-13,4;UBERON:0000204,1.65e-13,4;UBERON:0010082,1.65e-13,4;UBERON:0002298,5.57e-13,6;UBERON:0002680,1.24e-12,9;UBERON:0001895,1.24e-12,9;UBERON:0010092,1.24e-12,9;UBERON:0003076,1.64e-12,15;UBERON:0003057,1.64e-12,15;UBERON:0001871,2.67e-12,6;UBERON:0001872,7.39e-12,5;UBERON:0001870,9.73e-12,3;UBERON:0002021,2.12e-11,5;UBERON:0000483,1.07e-10,306;UBERON:0000119,1.71e-10,309;UBERON:0005383,2.25e-10,3;UBERON:0005382,2.25e-10,3;UBERON:0000988,2.92e-10,3;UBERON:0002702,1.93e-08,2;UBERON:0002771,2.65e-08,2;UBERON:0001954,9.75e-08,2;UBERON:0003022,9.75e-08,2;UBERON:0002421,9.75e-08,2;UBERON:0002600,9.75e-08,2;UBERON:0001876,1.32e-07,2;UBERON:0001897,1.50e-07,2;UBERON:0010225,1.50e-07,2;UBERON:0001873,1.61e-07,2;UBERON:0010122,1.61e-07,2;UBERON:0002148,3.40e-07,2;UBERON:0006331,3.40e-07,2;UBERON:0009662,3.40e-07,2;UBERON:0001875,3.52e-07,2;UBERON:0006514,3.52e-07,2 | |||
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| ||
|short_description=p2@SYT1 | |||
}} | }} |
Latest revision as of 23:31, 24 September 2015
Short description: | p2@SYT1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SYT1_5end |
Coexpression cluster: | C249_nonsmall_small_smallcell_occipital_somatostatinoma_maxillary_medial |
Association with transcript: | 0bp_to_ENST00000552624_5end |
EntrezGene: | SYT1 |
HGNC: | 11509 |
UniProt: | F8VXH0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data