FFCP PHASE1:Hg19::chr15:42697065..42697078,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:42697065..42697078,+ to FFCP PHASE1:Hg19::chr15:42697065..42697078,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=825 | |EntrezGene=825 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1480 | |HGNC=1480 | ||
|TSSclassifier=strong | |||
|UniProt=Q9BQC8,P20807,A4FTZ9 | |UniProt=Q9BQC8,P20807,A4FTZ9 | ||
|association_with_transcript=88bp_to_ENST00000337571,ENST00000397204,NM_173089,NM_173090,uc001zpr.1,uc001zps.1,uc001zpt.1,uc010bcv.1_5end | |||
|cluster_id=chr15:42697065..42697078,+ | |||
|coexpression_cluster_id=C88 | |||
|description=CAGE_peak_8_at_CAPN3_5end | |||
|id=chr15:42697065..42697078,+ | |||
|ontology_enrichment_celltype=CL:0000148!1.09e-16!10;CL:0000541!1.09e-16!10;CL:0000147!3.05e-14!14;CL:0002567!1.66e-09!3;CL:0000710!1.56e-07!20 | |||
|ontology_enrichment_celltype_v019=CL:0000148;1.26e-18;10!CL:0000147;1.53e-16;14!CL:0002567;6.72e-13;3!CL:0000710;9.36e-09;20 | |||
|ontology_enrichment_celltype_v019_2=CL:0000148,1.33e-18,10;CL:0000541,1.33e-18,10;CL:0000147,1.81e-16,14;CL:0002567,6.73e-13,3;CL:0000710,9.59e-09,20 | |||
|ontology_enrichment_development_v019=UBERON:0006601;7.72e-19;82 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1909;8.02e-09;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1909,7.87e-09,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!9.26e-75!57;UBERON:0005068!9.26e-75!57;UBERON:0006241!9.26e-75!57;UBERON:0007135!9.26e-75!57;UBERON:0002616!2.89e-61!59;UBERON:0002780!1.23e-57!41;UBERON:0001890!1.23e-57!41;UBERON:0006240!1.23e-57!41;UBERON:0005743!1.46e-57!86;UBERON:0003080!4.58e-56!42;UBERON:0000955!7.78e-56!69;UBERON:0006238!7.78e-56!69;UBERON:0001017!1.22e-55!82;UBERON:0007023!1.46e-55!115;UBERON:0000073!2.13e-53!94;UBERON:0001016!2.13e-53!94;UBERON:0003075!7.73e-53!86;UBERON:0007284!7.73e-53!86;UBERON:0002346!6.25e-50!90;UBERON:0001893!8.27e-50!34;UBERON:0002020!9.50e-50!34;UBERON:0003528!9.50e-50!34;UBERON:0002791!1.53e-47!33;UBERON:0001869!5.39e-45!32;UBERON:0003056!8.55e-41!61;UBERON:0002619!1.14e-34!22;UBERON:0000033!3.56e-31!123;UBERON:0001950!1.32e-30!20;UBERON:0000956!4.84e-30!25;UBERON:0000203!4.84e-30!25;UBERON:0000153!3.65e-29!129;UBERON:0007811!3.65e-29!129;UBERON:0004121!5.85e-27!169;UBERON:0000924!4.97e-26!173;UBERON:0006601!4.97e-26!173;UBERON:0002308!2.43e-22!9;UBERON:0000125!2.43e-22!9;UBERON:0002420!1.26e-21!9;UBERON:0007245!1.26e-21!9;UBERON:0010009!1.26e-21!9;UBERON:0010011!1.26e-21!9;UBERON:0000454!1.26e-21!9;UBERON:0003076!6.99e-19!15;UBERON:0003057!6.99e-19!15;UBERON:0009663!1.37e-17!7;UBERON:0002298!5.61e-16!8;UBERON:0000025!1.45e-15!194;UBERON:0000200!9.30e-15!6;UBERON:0004732!1.17e-14!13;UBERON:0004733!1.05e-12!12;UBERON:0002028!1.05e-12!12;UBERON:0007277!1.05e-12!12;UBERON:0000349!3.12e-12!5;UBERON:0001871!1.64e-10!7;UBERON:0000369!2.37e-10!4;UBERON:0002435!2.37e-10!4;UBERON:0000204!2.37e-10!4;UBERON:0010082!2.37e-10!4;UBERON:0004111!2.71e-10!241;UBERON:0001894!4.19e-09!7;UBERON:0006222!4.19e-09!7;UBERON:0006331!5.82e-09!3;UBERON:0000483!5.88e-09!309;UBERON:0000988!5.97e-09!3;UBERON:0000119!9.39e-09!312;UBERON:0001896!1.11e-08!3;UBERON:0005290!1.11e-08!3;UBERON:0010096!1.11e-08!3;UBERON:0001872!1.22e-08!5;UBERON:0002240!1.40e-08!3;UBERON:0002021!1.95e-08!5;UBERON:0005383!5.68e-08!3;UBERON:0005382!5.68e-08!3;UBERON:0002771!6.27e-08!3;UBERON:0000475!9.03e-08!365;UBERON:0000477!1.47e-07!286;UBERON:0000064!2.99e-07!219;UBERON:0002680!5.91e-07!9;UBERON:0001895!5.91e-07!9;UBERON:0010092!5.91e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.84e-49;34!UBERON:0003528;1.96e-47;34!UBERON:0002020;1.96e-47;34!UBERON:0002791;2.25e-45;32!UBERON:0001869;2.86e-45;32!UBERON:0002780;2.02e-41;41!UBERON:0001890;2.02e-41;41!UBERON:0000073;7.65e-41;53!UBERON:0002616;7.65e-41;53!UBERON:0002619;9.86e-40;22!UBERON:0001950;7.46e-39;20!UBERON:0000956;1.15e-34;25!UBERON:0000203;1.15e-34;25!UBERON:0000955;3.63e-26;68!UBERON:0001017;8.37e-26;75!UBERON:0000125;3.43e-25;9!UBERON:0002308;3.43e-25;9!UBERON:0002298;4.00e-22;6!UBERON:0000200;1.85e-20;6!UBERON:0001016;4.54e-20;83!UBERON:0002420;6.30e-19;9!UBERON:0007245;6.30e-19;9!UBERON:0010009;6.30e-19;9!UBERON:0010011;6.30e-19;9!UBERON:0000454;6.30e-19;9!UBERON:0009663;1.82e-18;7!UBERON:0004732;7.87e-17;13!UBERON:0007023;3.17e-16;114!UBERON:0004733;3.27e-14;12!UBERON:0002028;3.27e-14;12!UBERON:0000988;3.58e-12;3!UBERON:0001872;7.92e-12;5!UBERON:0001896;1.07e-11;3!UBERON:0005290;1.07e-11;3!UBERON:0002021;1.59e-11;5!UBERON:0001870;5.01e-11;3!UBERON:0011216;6.88e-09;132!UBERON:0001897;9.51e-09;2!UBERON:0010225;9.51e-09;2!UBERON:0002148;1.39e-08;2!UBERON:0006331;1.39e-08;2!UBERON:0009662;1.39e-08;2!UBERON:0000369;1.47e-08;4!UBERON:0002435;1.47e-08;4!UBERON:0000204;1.47e-08;4!UBERON:0001875;1.61e-08;2!UBERON:0006514;1.61e-08;2!UBERON:0005162;2.05e-08;2!UBERON:0000122;2.05e-08;2!UBERON:0001871;5.70e-08;6!UBERON:0002702;8.58e-08;2!UBERON:0002771;1.18e-07;2!UBERON:0010314;5.25e-07;132!UBERON:0000349;8.66e-07;5!UBERON:0002680;9.64e-07;9!UBERON:0001895;9.64e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.72e-78,56;UBERON:0005068,1.72e-78,56;UBERON:0006241,1.72e-78,56;UBERON:0007135,1.72e-78,56;UBERON:0000073,1.37e-73,53;UBERON:0002616,1.37e-73,53;UBERON:0000955,4.43e-62,68;UBERON:0006238,4.43e-62,68;UBERON:0001017,9.29e-61,81;UBERON:0002780,4.66e-60,41;UBERON:0001890,4.66e-60,41;UBERON:0003080,4.66e-60,41;UBERON:0006240,4.66e-60,41;UBERON:0001893,3.20e-57,34;UBERON:0003075,3.59e-57,82;UBERON:0007284,3.59e-57,82;UBERON:0003528,3.82e-57,34;UBERON:0002020,3.82e-57,34;UBERON:0001016,6.82e-57,89;UBERON:0002346,4.12e-54,86;UBERON:0002791,7.00e-51,32;UBERON:0001869,1.06e-50,32;UBERON:0007023,3.14e-49,114;UBERON:0010371,1.07e-48,104;UBERON:0003056,1.96e-44,61;UBERON:0002619,1.01e-39,22;UBERON:0001950,8.77e-39,20;UBERON:0000956,1.18e-34,25;UBERON:0000203,1.18e-34,25;UBERON:0010314,3.63e-34,132;UBERON:0004121,1.66e-30,171;UBERON:0000924,1.66e-30,171;UBERON:0006601,1.66e-30,171;UBERON:0000125,3.84e-25,9;UBERON:0002308,3.84e-25,9;UBERON:0002298,4.39e-22,6;UBERON:0000200,2.13e-20,6;UBERON:0011216,1.13e-19,223;UBERON:0002420,6.95e-19,9;UBERON:0007245,6.95e-19,9;UBERON:0010009,6.95e-19,9;UBERON:0010011,6.95e-19,9;UBERON:0000454,6.95e-19,9;UBERON:0003076,1.11e-18,15;UBERON:0003057,1.11e-18,15;UBERON:0009663,1.80e-18,7;UBERON:0000025,4.07e-18,192;UBERON:0004732,6.99e-17,13;UBERON:0004733,3.04e-14,12;UBERON:0002028,3.04e-14,12;UBERON:0007277,3.04e-14,12;UBERON:0004111,9.89e-13,240;UBERON:0000988,4.16e-12,3;UBERON:0001872,7.81e-12,5;UBERON:0001896,1.01e-11,3;UBERON:0005290,1.01e-11,3;UBERON:0010096,1.01e-11,3;UBERON:0002021,1.54e-11,5;UBERON:0000483,3.34e-11,306;UBERON:0001870,5.11e-11,3;UBERON:0000119,5.30e-11,309;UBERON:0001897,9.52e-09,2;UBERON:0010225,9.52e-09,2;UBERON:0000369,1.39e-08,4;UBERON:0002435,1.39e-08,4;UBERON:0000204,1.39e-08,4;UBERON:0010082,1.39e-08,4;UBERON:0002148,1.61e-08,2;UBERON:0006331,1.61e-08,2;UBERON:0009662,1.61e-08,2;UBERON:0001875,1.67e-08,2;UBERON:0006514,1.67e-08,2;UBERON:0005162,1.87e-08,2;UBERON:0000122,1.87e-08,2;UBERON:0001871,6.10e-08,6;UBERON:0002702,7.99e-08,2;UBERON:0002771,1.26e-07,2;UBERON:0000349,8.06e-07,5;UBERON:0002680,9.35e-07,9;UBERON:0001895,9.35e-07,9;UBERON:0010092,9.35e-07,9 | |||
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| ||
|short_description=p8@CAPN3 | |||
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Latest revision as of 16:04, 17 September 2015
Short description: | p8@CAPN3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_CAPN3_5end |
Coexpression cluster: | C88_Melanocyte_melanoma_Macrophage_Mesenchymal_migratory_Dendritic_Monocytederived |
Association with transcript: | 88bp_to_ENST00000337571, ENST00000397204, NM_173089, NM_173090, uc001zpr.1, uc001zps.1, uc001zpt.1, uc010bcv.1_5end |
EntrezGene: | CAPN3 |
HGNC: | 1480 |
UniProt: | Q9BQC8P20807A4FTZ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
melanocyte | 1.33e-18 | 10 |
melanoblast | 1.33e-18 | 10 |
pigment cell | 1.81e-16 | 14 |
light melanocyte | 6.73e-13 | 3 |
neurecto-epithelial cell | 9.59e-09 | 20 |
Ontology term | p-value | n |
---|---|---|
melanoma | 7.87e-09 | 2 |