FFCP PHASE1:Hg19::chr15:91445594..91445693,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr15:91445594..91445693,+ to FFCP PHASE1:Hg19::chr15:91445594..91445693,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4122 | |EntrezGene=4122 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6825 | |HGNC=6825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000559999,ENST00000560534_5end | |||
|cluster_id=chr15:91445594..91445693,+ | |||
|description=CAGE_peak_3_at_MAN2A2_5end | |||
|id=chr15:91445594..91445693,+ | |||
|ontology_enrichment_celltype=CL:0000037!2.09e-28!172;CL:0000566!2.09e-28!172;CL:0000988!5.12e-28!182;CL:0002032!8.03e-26!165;CL:0000837!8.03e-26!165;CL:0000738!1.26e-18!140;CL:0000763!1.41e-18!112;CL:0000049!1.41e-18!112;CL:0002031!1.96e-14!124;CL:0002087!5.88e-13!119;CL:0002057!3.25e-10!42;CL:0000860!5.00e-10!45;CL:0000766!1.44e-08!76;CL:0000839!1.61e-07!70;CL:0000557!2.20e-07!71;CL:0000838!3.22e-07!52;CL:0000542!4.36e-07!53;CL:0000051!4.36e-07!53 | |||
|ontology_enrichment_celltype_v019=CL:0000860;3.81e-10;33!CL:0002057;3.81e-10;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,5.97e-30,168;CL:0000988,3.30e-29,177;CL:0002032,3.04e-27,161;CL:0000837,3.04e-27,161;CL:0000738,7.86e-20,136;CL:0000763,1.16e-19,108;CL:0000049,1.16e-19,108;CL:0002031,2.04e-15,120;CL:0002087,4.85e-14,115;CL:0000860,1.51e-10,42;CL:0002057,1.51e-10,42;CL:0000766,3.31e-09,72;CL:0000839,4.26e-08,66;CL:0000557,6.08e-08,67;CL:0000838,1.53e-07,52;CL:0000542,2.10e-07,53;CL:0000051,2.10e-07,53;CL:0000473,2.64e-07,48;CL:0000234,2.64e-07,48;CL:0002009,2.86e-07,61;CL:0002194,9.29e-07,59;CL:0000576,9.29e-07,59;CL:0000040,9.29e-07,59;CL:0000559,9.29e-07,59 | |||
|ontology_enrichment_development_v019=CL:0002057;4.72e-08;42 | |||
|ontology_enrichment_disease=DOID:1240!2.88e-10!39;DOID:8692!1.36e-09!31;DOID:2531!1.81e-07!51;DOID:0060083!1.81e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:8692;1.15e-09;31!DOID:1240;6.70e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,1.90e-10,39;DOID:8692,9.77e-10,31;DOID:2531,8.85e-08,51;DOID:0060083,8.85e-08,51 | |||
|ontology_enrichment_uberon=UBERON:0007023!7.93e-24!115;UBERON:0001049!9.11e-20!57;UBERON:0005068!9.11e-20!57;UBERON:0006241!9.11e-20!57;UBERON:0007135!9.11e-20!57;UBERON:0002780!4.10e-16!41;UBERON:0001890!4.10e-16!41;UBERON:0006240!4.10e-16!41;UBERON:0003080!4.14e-16!42;UBERON:0005743!1.10e-15!86;UBERON:0001017!2.43e-15!82;UBERON:0000073!1.12e-14!94;UBERON:0001016!1.12e-14!94;UBERON:0002616!1.33e-14!59;UBERON:0002346!1.85e-14!90;UBERON:0000955!6.02e-14!69;UBERON:0006238!6.02e-14!69;UBERON:0003075!2.02e-13!86;UBERON:0007284!2.02e-13!86;UBERON:0001893!2.21e-13!34;UBERON:0002020!2.55e-13!34;UBERON:0003528!2.55e-13!34;UBERON:0002791!5.36e-13!33;UBERON:0001869!2.57e-12!32;UBERON:0003056!1.00e-09!61;UBERON:0002619!1.55e-09!22;UBERON:0002390!3.11e-09!102;UBERON:0003061!3.11e-09!102;UBERON:0002193!4.69e-09!112;UBERON:0000956!1.13e-08!25;UBERON:0000203!1.13e-08!25;UBERON:0001950!1.60e-08!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0002780;2.40e-12;41!UBERON:0001890;2.40e-12;41!UBERON:0003528;8.73e-12;34!UBERON:0002020;8.73e-12;34!UBERON:0002791;1.13e-11;32!UBERON:0001893;1.20e-11;34!UBERON:0000073;1.99e-11;53!UBERON:0002616;1.99e-11;53!UBERON:0001869;2.04e-11;32!UBERON:0002619;8.95e-10;22!UBERON:0000956;7.10e-09;25!UBERON:0000203;7.10e-09;25!UBERON:0001950;1.04e-08;20!UBERON:0000955;2.37e-07;68!UBERON:0001017;5.11e-07;75!UBERON:0007023;7.01e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,1.32e-23,114;UBERON:0001049,1.89e-20,56;UBERON:0005068,1.89e-20,56;UBERON:0006241,1.89e-20,56;UBERON:0007135,1.89e-20,56;UBERON:0000073,2.01e-19,53;UBERON:0002616,2.01e-19,53;UBERON:0002780,1.14e-16,41;UBERON:0001890,1.14e-16,41;UBERON:0003080,1.14e-16,41;UBERON:0006240,1.14e-16,41;UBERON:0001017,8.06e-16,81;UBERON:0001016,1.17e-14,89;UBERON:0000955,2.22e-14,68;UBERON:0006238,2.22e-14,68;UBERON:0001893,7.78e-14,34;UBERON:0003528,9.03e-14,34;UBERON:0002020,9.03e-14,34;UBERON:0002346,1.99e-13,86;UBERON:0002791,7.41e-13,32;UBERON:0001869,9.94e-13,32;UBERON:0003075,2.23e-12,82;UBERON:0007284,2.23e-12,82;UBERON:0002390,5.00e-10,98;UBERON:0003061,5.00e-10,98;UBERON:0002619,7.65e-10,22;UBERON:0003056,8.51e-10,61;UBERON:0002193,1.10e-09,108;UBERON:0000956,6.00e-09,25;UBERON:0000203,6.00e-09,25;UBERON:0001950,8.65e-09,20;UBERON:0010371,5.74e-07,104 | |||
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| ||
|short_description=p3@MAN2A2 | |||
}} | }} |
Latest revision as of 20:40, 19 September 2015
Short description: | p3@MAN2A2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_MAN2A2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000559999, ENST00000560534_5end |
EntrezGene: | MAN2A2 |
HGNC: | 6825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 5.97e-30 | 168 |
hematopoietic cell | 3.30e-29 | 177 |
hematopoietic oligopotent progenitor cell | 3.04e-27 | 161 |
hematopoietic multipotent progenitor cell | 3.04e-27 | 161 |
leukocyte | 7.86e-20 | 136 |
myeloid cell | 1.16e-19 | 108 |
common myeloid progenitor | 1.16e-19 | 108 |
hematopoietic lineage restricted progenitor cell | 2.04e-15 | 120 |
nongranular leukocyte | 4.85e-14 | 115 |
classical monocyte | 1.51e-10 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.51e-10 | 42 |
myeloid leukocyte | 3.31e-09 | 72 |
myeloid lineage restricted progenitor cell | 4.26e-08 | 66 |
granulocyte monocyte progenitor cell | 6.08e-08 | 67 |
lymphoid lineage restricted progenitor cell | 1.53e-07 | 52 |
lymphocyte | 2.10e-07 | 53 |
common lymphoid progenitor | 2.10e-07 | 53 |
defensive cell | 2.64e-07 | 48 |
phagocyte | 2.64e-07 | 48 |
macrophage dendritic cell progenitor | 2.86e-07 | 61 |
monopoietic cell | 9.29e-07 | 59 |
monocyte | 9.29e-07 | 59 |
monoblast | 9.29e-07 | 59 |
promonocyte | 9.29e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
adult organism | 1.32e-23 | 114 |
neural tube | 1.89e-20 | 56 |
neural rod | 1.89e-20 | 56 |
future spinal cord | 1.89e-20 | 56 |
neural keel | 1.89e-20 | 56 |
regional part of nervous system | 2.01e-19 | 53 |
regional part of brain | 2.01e-19 | 53 |
regional part of forebrain | 1.14e-16 | 41 |
forebrain | 1.14e-16 | 41 |
anterior neural tube | 1.14e-16 | 41 |
future forebrain | 1.14e-16 | 41 |
central nervous system | 8.06e-16 | 81 |
nervous system | 1.17e-14 | 89 |
brain | 2.22e-14 | 68 |
future brain | 2.22e-14 | 68 |
telencephalon | 7.78e-14 | 34 |
brain grey matter | 9.03e-14 | 34 |
gray matter | 9.03e-14 | 34 |
neurectoderm | 1.99e-13 | 86 |
regional part of telencephalon | 7.41e-13 | 32 |
cerebral hemisphere | 9.94e-13 | 32 |
neural plate | 2.23e-12 | 82 |
presumptive neural plate | 2.23e-12 | 82 |
hematopoietic system | 5.00e-10 | 98 |
blood island | 5.00e-10 | 98 |
regional part of cerebral cortex | 7.65e-10 | 22 |
pre-chordal neural plate | 8.51e-10 | 61 |
hemolymphoid system | 1.10e-09 | 108 |
cerebral cortex | 6.00e-09 | 25 |
pallium | 6.00e-09 | 25 |
neocortex | 8.65e-09 | 20 |
ecto-epithelium | 5.74e-07 | 104 |
Ontology term | p-value | n |
---|---|---|
leukemia | 1.90e-10 | 39 |
myeloid leukemia | 9.77e-10 | 31 |
hematologic cancer | 8.85e-08 | 51 |
immune system cancer | 8.85e-08 | 51 |