FFCP PHASE1:Hg19::chr16:66952742..66952774,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr16:66952742..66952774,- to FFCP PHASE1:Hg19::chr16:66952742..66952774,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=1014 | |EntrezGene=1014 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1755 | |HGNC=1755 | ||
|TSSclassifier=strong | |||
|UniProt=F5H184 | |UniProt=F5H184 | ||
|association_with_transcript=0bp_to_ENST00000544875,uc002eql.2,uc002eqm.2,uc010cdy.2_5end | |||
|cluster_id=chr16:66952742..66952774,- | |||
|coexpression_cluster_id=C51 | |||
|description=CAGE_peak_1_at_CDH16_5end | |||
|id=chr16:66952742..66952774,- | |||
|ontology_enrichment_celltype=CL:1000507!2.60e-25!12;CL:1000494!2.60e-25!12;CL:1000497!7.37e-24!18;CL:0002518!7.37e-24!18;CL:1000449!1.85e-18!16;CL:0002681!2.26e-11!13;CL:0002584!2.26e-11!13;CL:0000239!2.65e-10!3;CL:1000615!2.65e-10!3;CL:0002306!2.65e-10!3;CL:0000159!1.37e-07!2 | |||
|ontology_enrichment_celltype_v019=CL:1000497;5.97e-19;17!CL:0002518;5.97e-19;17!CL:1000507;7.64e-17;10!CL:1000494;7.64e-17;10!CL:0000650;1.04e-14;2!CL:1000500;1.04e-14;2!CL:1000618;1.04e-14;2!CL:1001318;1.04e-14;2!CL:0002173;1.04e-14;2!CL:1000449;3.52e-11;15!CL:0002149;5.84e-11;6!CL:0002255;5.84e-11;6!CL:0000313;1.57e-08;1!CL:0000669;8.53e-08;4 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,5.97e-19,17;CL:0002518,5.97e-19,17;CL:1000507,7.39e-17,10;CL:1000494,7.39e-17,10;CL:0000650,1.04e-14,2;CL:1000500,1.04e-14,2;CL:1000618,1.04e-14,2;CL:1001318,1.04e-14,2;CL:0002173,1.04e-14,2;CL:1000449,3.44e-11,15;CL:0002149,5.27e-11,6;CL:0002255,5.27e-11,6;CL:0000313,1.63e-08,1;CL:0000669,8.53e-08,4 | |||
|ontology_enrichment_development_v019=UBERON:0003918;1.02e-11;10!UBERON:0007687;1.02e-11;10!UBERON:0005425;5.82e-08;1!UBERON:0007123;9.87e-07;5 | |||
|ontology_enrichment_disease=DOID:299!4.56e-11!25;DOID:4468!3.86e-07!2 | |||
|ontology_enrichment_disease_v019=DOID:3001;5.84e-11;6!DOID:2152;1.57e-08;1 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,5.27e-11,6;DOID:2152,1.63e-08,1 | |||
|ontology_enrichment_uberon=UBERON:0009773!2.60e-25!12;UBERON:0001231!2.60e-25!12;UBERON:0004810!2.60e-25!12;UBERON:0002113!1.86e-24!27;UBERON:0003918!1.86e-24!27;UBERON:0005095!1.86e-24!27;UBERON:0007687!1.86e-24!27;UBERON:0006555!4.27e-21!17;UBERON:0005103!4.27e-21!17;UBERON:0000083!4.27e-21!17;UBERON:0009201!4.27e-21!17;UBERON:0004819!4.27e-21!17;UBERON:0006553!4.27e-21!17;UBERON:0003074!4.27e-21!17;UBERON:0003060!4.27e-21!17;UBERON:0005172!9.92e-21!55;UBERON:0005173!9.92e-21!55;UBERON:0000489!4.87e-20!32;UBERON:0000080!8.68e-20!18;UBERON:0002120!8.68e-20!18;UBERON:0004875!8.68e-20!18;UBERON:0005721!8.68e-20!18;UBERON:0005754!8.68e-20!18;UBERON:0007297!8.68e-20!18;UBERON:0003887!1.21e-19!21;UBERON:0004211!1.85e-18!16;UBERON:0001285!1.85e-18!16;UBERON:0007684!1.85e-18!16;UBERON:0003220!1.85e-18!16;UBERON:0004208!1.85e-18!16;UBERON:0002417!3.71e-18!61;UBERON:0000916!3.71e-18!61;UBERON:0006554!1.16e-17!44;UBERON:0004876!1.45e-17!20;UBERON:0001008!3.56e-17!45;UBERON:0000058!5.89e-13!26;UBERON:0003064!6.47e-12!37;UBERON:0001225!2.26e-11!13;UBERON:0008987!2.26e-11!13;UBERON:0005177!3.24e-11!107;UBERON:0009569!2.57e-10!113;UBERON:0006853!2.65e-10!3;UBERON:0007685!2.65e-10!3;UBERON:0004134!2.65e-10!3;UBERON:0003886!2.47e-09!63;UBERON:0002553!3.28e-09!70;UBERON:0001851!4.79e-09!16;UBERON:0003103!1.83e-08!69;UBERON:0000466!1.85e-08!126;UBERON:0000353!1.87e-08!17;UBERON:0000341!4.51e-08!2;UBERON:0000464!2.21e-07!104 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;4.76e-22;24!UBERON:0011143;4.76e-22;24!UBERON:0000489;5.22e-18;29!UBERON:0006554;2.31e-17;30!UBERON:0001008;2.31e-17;30!UBERON:0004211;7.64e-17;10!UBERON:0009773;7.64e-17;10!UBERON:0001231;7.64e-17;10!UBERON:0004810;7.64e-17;10!UBERON:0000341;5.52e-15;2!UBERON:0003567;1.04e-14;2!UBERON:0003838;1.04e-14;2!UBERON:0003586;1.04e-14;2!UBERON:0005169;1.04e-14;2!UBERON:0002321;1.04e-14;2!UBERON:0005215;1.04e-14;2!UBERON:0002303;1.04e-14;2!UBERON:0002319;1.04e-14;2!UBERON:0004175;2.51e-11;21!UBERON:0006555;3.52e-11;15!UBERON:0004819;3.52e-11;15!UBERON:0001285;3.52e-11;15!UBERON:0007684;3.52e-11;15!UBERON:0000995;5.60e-10;17!UBERON:0003975;2.06e-09;18!UBERON:0004911;1.57e-08;1!UBERON:0001301;2.89e-08;1!UBERON:0005795;5.82e-08;1!UBERON:0000941;5.82e-08;1!UBERON:0001785;5.82e-08;1!UBERON:0002464;5.82e-08;1!UBERON:0004904;5.82e-08;1!UBERON:0001021;5.82e-08;1!UBERON:0003891;8.53e-08;4!UBERON:0003134;2.29e-07;33!UBERON:0005172;2.55e-07;52!UBERON:0005173;2.55e-07;52!UBERON:0002046;9.87e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,5.29e-25,26;UBERON:0003918,5.29e-25,26;UBERON:0011143,5.29e-25,26;UBERON:0005095,5.29e-25,26;UBERON:0007687,5.29e-25,26;UBERON:0000489,1.05e-20,31;UBERON:0004810,7.39e-17,10;UBERON:0000341,5.52e-15,2;UBERON:0006555,7.40e-15,16;UBERON:0004819,7.40e-15,16;UBERON:0003567,1.04e-14,2;UBERON:0003838,1.04e-14,2;UBERON:0003586,1.04e-14,2;UBERON:0005169,1.04e-14,2;UBERON:0002321,1.04e-14,2;UBERON:0005215,1.04e-14,2;UBERON:0002303,1.04e-14,2;UBERON:0002319,1.04e-14,2;UBERON:0006554,4.38e-13,47;UBERON:0001008,8.89e-13,48;UBERON:0004211,3.44e-11,15;UBERON:0009773,3.44e-11,15;UBERON:0001231,3.44e-11,15;UBERON:0001285,3.44e-11,15;UBERON:0007684,3.44e-11,15;UBERON:0004208,3.44e-11,15;UBERON:0005172,3.59e-11,54;UBERON:0005173,3.59e-11,54;UBERON:0005795,9.99e-11,22;UBERON:0002417,6.91e-10,60;UBERON:0000916,6.91e-10,60;UBERON:0004175,1.97e-09,25;UBERON:0003103,1.58e-08,68;UBERON:0004911,1.63e-08,1;UBERON:0005103,2.69e-08,8;UBERON:0000083,2.69e-08,8;UBERON:0009201,2.69e-08,8;UBERON:0006553,2.69e-08,8;UBERON:0003074,2.69e-08,8;UBERON:0003060,2.69e-08,8;UBERON:0001301,2.89e-08,1;UBERON:0000995,4.89e-08,21;UBERON:0000941,6.68e-08,1;UBERON:0001785,6.68e-08,1;UBERON:0002464,6.68e-08,1;UBERON:0004904,6.68e-08,1;UBERON:0001021,6.68e-08,1;UBERON:0003902,6.68e-08,1;UBERON:0005425,6.68e-08,1;UBERON:0003891,8.53e-08,4;UBERON:0003975,1.16e-07,22;UBERON:0000080,2.00e-07,9;UBERON:0002120,2.00e-07,9;UBERON:0004875,2.00e-07,9;UBERON:0005721,2.00e-07,9;UBERON:0005754,2.00e-07,9;UBERON:0007297,2.00e-07,9;UBERON:0002046,9.87e-07,5;UBERON:0004117,9.87e-07,5;UBERON:0007689,9.87e-07,5;UBERON:0007123,9.87e-07,5;UBERON:0003091,9.87e-07,5 | |||
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|short_description=p1@CDH16 | |||
}} | }} |
Latest revision as of 09:03, 17 September 2015
Short description: | p1@CDH16 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CDH16_5end |
Coexpression cluster: | C51_kidney_mesothelioma_renal_signet_gall_lung_pancreas |
Association with transcript: | 0bp_to_ENST00000544875, uc002eql.2, uc002eqm.2, uc010cdy.2_5end |
EntrezGene: | CDH16 |
HGNC: | 1755 |
UniProt: | F5H184 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 5.97e-19 | 17 |
kidney epithelial cell | 5.97e-19 | 17 |
kidney tubule cell | 7.39e-17 | 10 |
nephron tubule epithelial cell | 7.39e-17 | 10 |
mesangial cell | 1.04e-14 | 2 |
kidney interstitial cell | 1.04e-14 | 2 |
juxtaglomerular complex cell | 1.04e-14 | 2 |
renal interstitial pericyte | 1.04e-14 | 2 |
extraglomerular mesangial cell | 1.04e-14 | 2 |
epithelial cell of nephron | 3.44e-11 | 15 |
epithelial cell of uterus | 5.27e-11 | 6 |
stromal cell of endometrium | 5.27e-11 | 6 |
serous secreting cell | 1.63e-08 | 1 |
pericyte cell | 8.53e-08 | 4 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 5.27e-11 | 6 |
ovary epithelial cancer | 1.63e-08 | 1 |