FFCP PHASE1:Hg19::chr17:4643118..4643145,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr17:4643118..4643145,+ to FFCP PHASE1:Hg19::chr17:4643118..4643145,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=84225 | |EntrezGene=84225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=20997 | |HGNC=20997 | ||
|TSSclassifier=strong | |||
|UniProt=B4DXY5 | |UniProt=B4DXY5 | ||
|association_with_transcript=-173bp_to_ENST00000433935,NM_001136046,uc002fyt.2,uc002fyv.2_5end | |||
|cluster_id=chr17:4643118..4643145,+ | |||
|coexpression_cluster_id=C821 | |||
|description=CAGE_peak_1_at_ZMYND15_5end | |||
|id=chr17:4643118..4643145,+ | |||
|ontology_enrichment_celltype=CL:0000766!2.84e-51!76;CL:0002009!1.58e-49!65;CL:0002057!3.34e-48!42;CL:0000557!9.38e-48!71;CL:0002194!1.81e-47!63;CL:0000576!1.81e-47!63;CL:0000040!1.81e-47!63;CL:0000559!1.81e-47!63;CL:0000860!1.79e-45!45;CL:0000839!9.38e-45!70;CL:0000763!3.22e-35!112;CL:0000049!3.22e-35!112;CL:0000738!4.35e-30!140;CL:0002087!5.93e-21!119;CL:0002031!1.65e-20!124;CL:0000037!2.24e-20!172;CL:0000566!2.24e-20!172;CL:0002032!3.31e-18!165;CL:0000837!3.31e-18!165;CL:0000988!6.80e-18!182;CL:0002393!6.15e-12!9;CL:0002397!6.15e-12!9;CL:0000451!4.72e-09!10;CL:0000990!6.72e-08!8;CL:0000453!3.09e-07!5 | |||
|ontology_enrichment_celltype_v019=CL:0000860;9.47e-61;33!CL:0002057;9.47e-61;33!CL:0000576;2.86e-54;48!CL:0000473;6.20e-53;39!CL:0000234;6.20e-53;39!CL:0000766;5.33e-40;69!CL:0000763;1.61e-17;100!CL:0002393;4.89e-14;6!CL:0002397;4.89e-14;6!CL:0000738;4.29e-13;136!CL:0002087;4.62e-13;104!CL:0000453;8.70e-12;5!CL:0000094;2.18e-09;8!CL:0000990;1.38e-08;8!CL:0000875;3.65e-08;3!CL:0002396;3.65e-08;3!CL:0000775;1.36e-07;3!CL:0000988;3.73e-07;177!CL:0002619;3.81e-07;3!CL:0000451;7.18e-07;10!CL:0000226;7.26e-07;3!CL:0000842;7.26e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,1.54e-89,48;CL:0000234,1.54e-89,48;CL:0000860,3.83e-87,42;CL:0002057,3.83e-87,42;CL:0002009,5.20e-86,61;CL:0000766,8.34e-84,72;CL:0002194,3.12e-82,59;CL:0000576,3.12e-82,59;CL:0000040,3.12e-82,59;CL:0000559,3.12e-82,59;CL:0000557,5.04e-77,67;CL:0000839,4.89e-72,66;CL:0000763,1.69e-62,108;CL:0000049,1.69e-62,108;CL:0000738,1.28e-51,136;CL:0002087,2.15e-40,115;CL:0000037,1.93e-38,168;CL:0002031,1.75e-36,120;CL:0002032,2.43e-36,161;CL:0000837,2.43e-36,161;CL:0000988,1.35e-35,177;CL:0002393,1.70e-20,9;CL:0002397,1.70e-20,9;CL:0000453,6.35e-12,5;CL:0000094,1.20e-09,8;CL:0000134,1.82e-09,354;CL:0002320,5.52e-09,361;CL:0000990,1.20e-08,8;CL:0000875,3.26e-08,3;CL:0002396,3.26e-08,3;CL:0000775,9.12e-08,3;CL:0000219,2.56e-07,386;CL:0002619,2.99e-07,3;CL:0000451,6.42e-07,10;CL:0000081,8.72e-07,11 | |||
|ontology_enrichment_development_v019=CL:0002057;5.93e-62;42!CL:0000049;1.65e-17;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.46e-44!102;UBERON:0003061!1.46e-44!102;UBERON:0007023!2.35e-44!115;UBERON:0002371!2.13e-41!80;UBERON:0002193!9.16e-41!112;UBERON:0001474!6.42e-37!86;UBERON:0002405!1.67e-33!115;UBERON:0004765!3.41e-30!101;UBERON:0001434!3.41e-30!101;UBERON:0001049!5.46e-17!57;UBERON:0005068!5.46e-17!57;UBERON:0006241!5.46e-17!57;UBERON:0007135!5.46e-17!57;UBERON:0000062!2.71e-15!511;UBERON:0003081!6.36e-15!216;UBERON:0003080!7.16e-13!42;UBERON:0002616!1.00e-12!59;UBERON:0002204!1.90e-12!167;UBERON:0003075!2.43e-12!86;UBERON:0007284!2.43e-12!86;UBERON:0002780!2.89e-12!41;UBERON:0001890!2.89e-12!41;UBERON:0006240!2.89e-12!41;UBERON:0001017!4.61e-12!82;UBERON:0005743!1.04e-11!86;UBERON:0000955!1.23e-11!69;UBERON:0006238!1.23e-11!69;UBERON:0000923!1.79e-11!604;UBERON:0005291!1.79e-11!604;UBERON:0006598!1.79e-11!604;UBERON:0002532!1.79e-11!604;UBERON:0002050!2.23e-11!605;UBERON:0005423!2.23e-11!605;UBERON:0002346!3.18e-11!90;UBERON:0000922!3.64e-11!612;UBERON:0000073!9.84e-11!94;UBERON:0001016!9.84e-11!94;UBERON:0000467!1.74e-10!625;UBERON:0000480!2.14e-10!626;UBERON:0001893!2.35e-09!34;UBERON:0002020!2.75e-09!34;UBERON:0003528!2.75e-09!34;UBERON:0000468!8.10e-09!659;UBERON:0002791!8.19e-09!33;UBERON:0000479!3.15e-08!787;UBERON:0001869!5.08e-08!32;UBERON:0002298!6.87e-08!8;UBERON:0003056!9.99e-08!61;UBERON:0000153!9.07e-07!129;UBERON:0007811!9.07e-07!129 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.52e-66,76;UBERON:0002390,2.64e-61,98;UBERON:0003061,2.64e-61,98;UBERON:0001474,2.92e-60,82;UBERON:0002405,5.97e-56,93;UBERON:0002193,3.92e-54,108;UBERON:0004765,1.37e-53,90;UBERON:0001434,9.53e-47,100;UBERON:0003081,1.48e-26,203;UBERON:0002204,3.63e-23,167;UBERON:0000926,1.21e-12,315;UBERON:0004120,1.21e-12,315;UBERON:0006603,1.21e-12,315;UBERON:0002384,7.98e-09,371;UBERON:0000923,4.28e-08,560;UBERON:0010316,4.28e-08,560;UBERON:0005291,4.28e-08,560;UBERON:0006598,4.28e-08,560;UBERON:0010317,4.28e-08,560;UBERON:0002532,4.28e-08,560;UBERON:0002050,6.75e-08,564;UBERON:0005423,4.36e-07,581 | |||
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| ||
|short_description=p1@ZMYND15 | |||
}} | }} |
Latest revision as of 06:22, 25 September 2015
Short description: | p1@ZMYND15 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ZMYND15_5end |
Coexpression cluster: | C821_migratory_CD14_immature_CD14CD16_Dendritic_Macrophage_Monocytederived |
Association with transcript: | -173bp_to_ENST00000433935, NM_001136046, uc002fyt.2, uc002fyv.2_5end |
EntrezGene: | ZMYND15 |
HGNC: | 20997 |
UniProt: | B4DXY5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.52e-66 | 76 |
hematopoietic system | 2.64e-61 | 98 |
blood island | 2.64e-61 | 98 |
bone element | 2.92e-60 | 82 |
immune system | 5.97e-56 | 93 |
hemolymphoid system | 3.92e-54 | 108 |
skeletal element | 1.37e-53 | 90 |
skeletal system | 9.53e-47 | 100 |
lateral plate mesoderm | 1.48e-26 | 203 |
musculoskeletal system | 3.63e-23 | 167 |
mesoderm | 1.21e-12 | 315 |
mesoderm-derived structure | 1.21e-12 | 315 |
presumptive mesoderm | 1.21e-12 | 315 |
connective tissue | 7.98e-09 | 371 |
germ layer | 4.28e-08 | 560 |
germ layer / neural crest | 4.28e-08 | 560 |
embryonic tissue | 4.28e-08 | 560 |
presumptive structure | 4.28e-08 | 560 |
germ layer / neural crest derived structure | 4.28e-08 | 560 |
epiblast (generic) | 4.28e-08 | 560 |
embryonic structure | 6.75e-08 | 564 |
developing anatomical structure | 4.36e-07 | 581 |