FFCP PHASE1:Hg19::chr1:40882919..40882923,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:40882919..40882923,+ to FFCP PHASE1:Hg19::chr1:40882919..40882923,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:40882919..40882923,+ | |||
|coexpression_cluster_id=C2583 | |||
|description=CAGE_peak_at_chr1:40882919..40882923,+ | |||
|id=chr1:40882919..40882923,+ | |||
|ontology_enrichment_celltype=CL:0000037!1.71e-37!172;CL:0000566!1.71e-37!172;CL:0002032!5.21e-37!165;CL:0000837!5.21e-37!165;CL:0002087!6.80e-37!119;CL:0000738!1.49e-36!140;CL:0002031!2.20e-35!124;CL:0000988!2.32e-35!182;CL:0000542!7.70e-20!53;CL:0000051!7.70e-20!53;CL:0000838!2.03e-19!52;CL:0000763!2.68e-17!112;CL:0000049!2.68e-17!112;CL:0000839!6.09e-16!70;CL:0002009!3.33e-15!65;CL:0002194!3.41e-15!63;CL:0000576!3.41e-15!63;CL:0000040!3.41e-15!63;CL:0000559!3.41e-15!63;CL:0000557!1.35e-14!71;CL:0000766!1.96e-14!76;CL:0002057!1.44e-13!42;CL:0000860!4.93e-12!45;CL:0000945!2.23e-10!24;CL:0000826!2.23e-10!24;CL:0000084!9.39e-09!25;CL:0000827!9.39e-09!25;CL:0000791!2.55e-08!18;CL:0000789!2.55e-08!18;CL:0002420!2.55e-08!18;CL:0002419!2.55e-08!18;CL:0000790!2.55e-08!18;CL:0000236!8.08e-08!14 | |||
|ontology_enrichment_celltype_v019=CL:0000542;1.22e-13;53!CL:0002087;2.25e-13;104!CL:0000236;1.31e-12;13!CL:0000945;1.12e-11;24!CL:0000791;7.55e-11;18!CL:0000789;7.55e-11;18!CL:0002419;7.55e-11;18!CL:0000576;2.20e-10;48!CL:0000624;1.26e-08;6!CL:0000860;5.21e-08;33!CL:0002057;5.21e-08;33!CL:0000084;5.37e-08;25!CL:0000738;1.04e-07;136!CL:0000988;6.89e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,1.44e-37,177;CL:0000037,4.75e-37,168;CL:0002087,2.52e-36,115;CL:0002032,9.23e-36,161;CL:0000837,9.23e-36,161;CL:0000738,2.19e-34,136;CL:0002031,1.61e-32,120;CL:0000542,8.12e-22,53;CL:0000051,8.12e-22,53;CL:0000838,4.52e-21,52;CL:0000763,4.62e-15,108;CL:0000049,4.62e-15,108;CL:0002009,7.29e-13,61;CL:0002194,2.41e-12,59;CL:0000576,2.41e-12,59;CL:0000040,2.41e-12,59;CL:0000559,2.41e-12,59;CL:0000839,6.11e-12,66;CL:0000945,1.43e-11,24;CL:0000826,1.43e-11,24;CL:0000236,1.68e-11,14;CL:0000791,4.17e-11,18;CL:0000789,4.17e-11,18;CL:0002420,4.17e-11,18;CL:0002419,4.17e-11,18;CL:0000790,4.17e-11,18;CL:0000557,5.85e-11,67;CL:0000860,6.57e-11,42;CL:0002057,6.57e-11,42;CL:0000766,1.15e-10,72;CL:0000473,7.81e-10,48;CL:0000234,7.81e-10,48;CL:0000624,7.19e-09,6;CL:0000084,3.24e-08,25;CL:0000827,3.24e-08,25;CL:0000134,4.50e-07,354 | |||
|ontology_enrichment_development_v019=CL:0000051;1.22e-13;53!CL:0000790;7.55e-11;18!CL:0002057;3.99e-08;42!CL:0000049;9.35e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!1.33e-20!102;UBERON:0003061!1.33e-20!102;UBERON:0002193!4.75e-18!112;UBERON:0007023!8.41e-16!115;UBERON:0002371!1.52e-12!80;UBERON:0001474!2.18e-12!86;UBERON:0004765!6.82e-10!101;UBERON:0001434!6.82e-10!101;UBERON:0002405!3.80e-09!115;UBERON:0000178!2.56e-08!15;UBERON:0000179!2.56e-08!15;UBERON:0000463!2.56e-08!15;UBERON:0002780!9.11e-08!41;UBERON:0001890!9.11e-08!41;UBERON:0006240!9.11e-08!41;UBERON:0001049!2.29e-07!57;UBERON:0005068!2.29e-07!57;UBERON:0006241!2.29e-07!57;UBERON:0007135!2.29e-07!57;UBERON:0003080!2.60e-07!42;UBERON:0002020!9.95e-07!34;UBERON:0003528!9.95e-07!34 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.21e-12;15!UBERON:0000179;1.21e-12;15!UBERON:0000463;1.21e-12;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.42e-18,98;UBERON:0003061,3.42e-18,98;UBERON:0002193,2.61e-16,108;UBERON:0000178,1.83e-12,15;UBERON:0000179,1.83e-12,15;UBERON:0000463,1.83e-12,15;UBERON:0002371,1.58e-09,76;UBERON:0002405,4.88e-09,93;UBERON:0001474,3.06e-08,82;UBERON:0007023,1.14e-07,114;UBERON:0003528,6.05e-07,34;UBERON:0002020,6.05e-07,34;UBERON:0001049,6.79e-07,56;UBERON:0005068,6.79e-07,56;UBERON:0006241,6.79e-07,56;UBERON:0007135,6.79e-07,56;UBERON:0000073,7.83e-07,53;UBERON:0002616,7.83e-07,53;UBERON:0004765,7.94e-07,90 | |||
|phase1_expression=0,0,0.281908808191942,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0.125542639594803,1.06978768047132,0.57470412614962,1.10195093839151,0,0.383829398097213,0.309632246632152,0,0,0,0.774672005803016,0.284338464974843,0,0.553995408531877,0.401088894940283,1.73608696572681,3.80656306207871,2.26725566213286,3.34848237924443,1.45398238779565,1.13362783106643,0.727752183563449,0.232429036905685,0.411167888021826,0.929119112685311,4.02769349251011,4.61089271752381,1.89185783910868,2.06847408441971,2.5819387343353,1.35426486594342,0,0.818718450173537,0.224723484445085,1.83650335422542,0.641858054152187,1.27867425159808,2.30895910130701,4.58766412529753,1.70489900213078,0,1.13477044938228,0,6.02996796616184,11.9941071236646,3.25783267057675,0.605399502633369,0.368277635987565,0.632924774881769,0.422510572623884,1.4882300997553,0.628975936525128,0,0.600707571366025,0.48217676009124,2.56511469367124,3.18266683518544,1.64397738388171,3.51992488922645,1.63841583378639,2.66852776159066,2.98711155796555,2.00197993518006,1.14950487990897,1.32208974556972,5.72432252721218,12.5226853204079,9.39579502993502,13.379562984383,0,0.560508562981536,0,3.14735632182133,2.35806457649499,3.90642848099067,0.668745981562712,1.62961133316795,2.36723902867367,1.94826728407911,0.334231370655521,2.94605907474837,0.443067789167242,2.16643091012012,3.84273959177025,4.29195846947598,3.28875809207352,1.38175008892924,0.289803085735052,3.11401782640327,4.0131124213457,3.1360657141493,1.13309342697566,1.53288197440768,0.68725489096526,4.55435445635105,0.637130828648193,2.60433381542567,1.90090408889675,0.752875595388864,0.255973222308837,0,1.18388626022008,1.64225599384209,2.01606743224732,2.13952156626806,4.19990771260117,0,0.670700859703636,0,0,0,0,0,0,0.0945348171640679,0.443458794925128,0.087834785693126,0.196468613246569,0,0,0.649094787309367,0.870648686496336,0.531831842075461,0.953962497221368,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.44905874525234,0,0,0,0,0,0,0,0.496971951695318,0.12663051166458,0.132409180813219,0.286836620748814,0,0.560677600142307,0,0,0,0,0.326923806226917,0,1.15235184896,0,0,0,0,0,0.161872944368132,0.280901613404497,0.408308342509787,0.245668634623536,0.103325781175765,0,0,0,0,0.168336113954066,0.375355559615893,0.277064115484183,0.438977620880838,0,0,0.113432183160021,0,0.427114777637135,0,0,0,0,0,0.506328996723799,0,0,0,0,0.355009592516614,0.10075209822764,0,0.193260853163297,0,0,0,0,0,0,0.252320850875628,0.36497735907583,0,0,0,0.464367928031979,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,1.77236972004421,0.882926198829301,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,2.21595305478658,0.702012795417713,0.743155811443641,0,0,0.141775097242386,0.0895585227028483,0,0,0,0.264145302039678,0.414656231081544,0.144119953416961,0.75745460055828,0.190493682876507,0,0,0,0,0,0,0,0,0,0.129271715757778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.199945982364114,0,0,0,0,0,0,0,0.410952645100767,0,0.112085143993527,1.37921532141349,1.94064817373566,2.69520376187472,0,1.30139853857622,0,0,0,3.74503511973591,14.9580729602012,0,0,0,0,0,0,0.315404830067869,0,0,0,0,0,0,0.173767228936166,0,0,3.10152039184331,1.94142780736755,2.02782359826544,0,0,0,0,0,0,0,0,0.160853921143607,0,0.154209693802656,0,0.164254312027618,0,0,0,0,0.368323955743585,0.114814448164607,0,0.131124414959424,0,0,0,0,0,0,0,0,0,0,0,0,0,0.223874754722178,1.31555925987561,1.3071772551245,0,0,0,0.412164046590889,0.366277859273374,0.165018999841176,0,0,1.6068392984416,0.096670718292122,0.154048617114644,0.15350367472613,0,0.107420244868274,0,0.0852266274161009,0,0,0.192190067365106,0.382838137483752,0.10115778085555,0,0,0,0,0,0,0,0.286249773483982,0.372158369359667,0,0,0,0,0,0,0.179872457583315,0.274537029736055,0,0,0,0.421258456238981,0,0,0,0,0.141405431953713,0,0,0,0,0.578775534266688,0,0,0.30982349809975,0,0,0,0.35667105148125,0,0,0,0,0,0,0,0,0.659006605437454,0,0,0,0,1.01489521846434,2.29391162142713,6.83576624608995,6.4322579373603,4.93634727703433,0.648473311192717,0.540031437238115,3.96562588147135,0,0,0.245040215981032,1.11481905075431,0,0.284567373393656,0.159426272728822,0,0.191505370132367,1.2700414963433,0,0.280797178113459,0.228234679033192,0,0,0,1.2847046008296,1.41259795033733,0,0,1.84344458585075,3.35514161838624,1.00109485027145,0.586164286206121,0,2.46174797895425,1.08182271390393,0.33307196799782,0,0,0.293016358543788,0,1.5602073798847,0.284136146806413,0,0,0,1.9882952955326,2.81338832821025,0,0.988823245360557,0.63337622438398,0.597743964753209,1.65770349318689,0.251932747854276,0.409074730008619,1.10776324914963,0,0.0898683511473268,0,1.02314474045374,0.591860433821602,0,0,0,0.463840490809256,0,0,0.524759999977174,0,0,0,0,1.03423011972439,0.874813840149763,0.694499979733169,0,1.68835014075571,0,0.995213339381022,1.18219047581419,0.219385397153973,0.10893846351899,0,0.692552326534174,0,0,0,0,0,0.274792780205587,0,0,0.31396051279005,0.166211681900156,1.57916962432026,1.17637520590644,1.51039428278258,1.70778359451767,0.476809736941136,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| ||
|short_description=p@chr1:40882919..40882923,+ | |||
}} | }} |
Latest revision as of 08:12, 28 July 2015
Short description: | p@chr1:40882919..40882923, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:40882919..40882923, + |
Coexpression cluster: | C2583_CD19_Neutrophils_CD14_Peripheral_Whole_CD4_migratory |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.42e-18 | 98 |
blood island | 3.42e-18 | 98 |
hemolymphoid system | 2.61e-16 | 108 |
blood | 1.83e-12 | 15 |
haemolymphatic fluid | 1.83e-12 | 15 |
organism substance | 1.83e-12 | 15 |
bone marrow | 1.58e-09 | 76 |
immune system | 4.88e-09 | 93 |
bone element | 3.06e-08 | 82 |
adult organism | 1.14e-07 | 114 |
brain grey matter | 6.05e-07 | 34 |
gray matter | 6.05e-07 | 34 |
neural tube | 6.79e-07 | 56 |
neural rod | 6.79e-07 | 56 |
future spinal cord | 6.79e-07 | 56 |
neural keel | 6.79e-07 | 56 |
regional part of nervous system | 7.83e-07 | 53 |
regional part of brain | 7.83e-07 | 53 |
skeletal element | 7.94e-07 | 90 |