FFCP PHASE1:Hg19::chr1:68851155..68851158,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr1:68851155..68851158,+ to FFCP PHASE1:Hg19::chr1:68851155..68851158,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr1:68851155..68851158,+ | |||
|description=CAGE_peak_at_chr1:68851155..68851158,+ | |||
|id=chr1:68851155..68851158,+ | |||
|ontology_enrichment_celltype=CL:0000055!3.44e-18!180;CL:0000680!2.29e-13!57;CL:0000056!2.29e-13!57;CL:0000355!2.29e-13!57;CL:0000183!1.24e-11!59;CL:0000187!3.42e-11!54;CL:0000057!6.77e-10!75;CL:0000393!2.19e-09!60;CL:0000211!2.19e-09!60;CL:0000192!3.53e-09!42;CL:0000514!3.53e-09!42;CL:0000222!1.60e-07!119;CL:0002594!3.48e-07!4;CL:0002548!4.99e-07!6;CL:0000359!8.51e-07!32 | |||
|ontology_enrichment_celltype_v019=CL:0002554;1.86e-12;2!CL:0002195;4.61e-12;2!CL:0002571;4.61e-12;2!CL:0002367;4.61e-12;2!CL:0002556;4.03e-09;6!CL:0002592;2.50e-08;3!CL:0000359;3.19e-07;32!CL:0000511;7.34e-07;1!CL:0002625;7.34e-07;1!CL:0002550;7.34e-07;1!CL:0000216;7.34e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0002554,1.41e-12,2;CL:0002367,3.92e-12,2;CL:0002195,1.66e-11,2;CL:0002571,1.66e-11,2;CL:0002556,7.20e-09,6;CL:0002592,3.02e-08,3;CL:0000359,8.55e-08,32;CL:0000192,2.77e-07,43;CL:0000514,2.77e-07,43;CL:0000511,4.78e-07,1;CL:0002625,4.78e-07,1;CL:0000216,4.78e-07,1;CL:0002550,6.76e-07,1;CL:0000057,9.13e-07,76 | |||
|ontology_enrichment_development_v019=UBERON:0003099;2.49e-07;1!UBERON:0003852;2.49e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000914!1.36e-17!83;UBERON:0002329!1.36e-17!83;UBERON:0003077!1.36e-17!83;UBERON:0003059!1.36e-17!83;UBERON:0007282!1.36e-17!83;UBERON:0009618!1.36e-17!83;UBERON:0007285!1.36e-17!83;UBERON:0005256!1.63e-15!143;UBERON:0004290!1.14e-14!70;UBERON:0001134!5.75e-12!61;UBERON:0002036!5.75e-12!61;UBERON:0003082!5.75e-12!61;UBERON:0000486!5.87e-12!82;UBERON:0002385!2.44e-11!63;UBERON:0001015!2.44e-11!63;UBERON:0000383!2.44e-11!63;UBERON:0000475!1.34e-10!365;UBERON:0002100!1.56e-10!216;UBERON:0003104!2.77e-10!238;UBERON:0009142!2.77e-10!238;UBERON:0000481!2.77e-10!347;UBERON:0000119!5.24e-08!312;UBERON:0000483!7.36e-08!309;UBERON:0000490!2.16e-07!138;UBERON:0001310!3.48e-07!4;UBERON:0003102!4.00e-07!95;UBERON:0002049!5.93e-07!79;UBERON:0007798!5.93e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0005969;4.61e-12;2!UBERON:0003956;4.61e-12;2!UBERON:0001758;4.03e-09;6!UBERON:0003672;4.03e-09;6!UBERON:0011137;1.44e-08;11!UBERON:0010323;1.44e-08;11!UBERON:0003498;2.50e-08;3!UBERON:0005985;2.50e-08;3!UBERON:0001621;2.50e-08;3!UBERON:0003129;7.02e-08;7!UBERON:0005705;2.49e-07;1!UBERON:0008193;2.49e-07;1!UBERON:0010912;2.49e-07;1!UBERON:0002514;2.49e-07;1!UBERON:0003457;2.49e-07;1!UBERON:0008907;2.49e-07;1!UBERON:0008001;2.49e-07;1!UBERON:0007213;2.49e-07;1!UBERON:0009891;2.49e-07;1!UBERON:0007914;2.49e-07;1!UBERON:0007375;2.49e-07;1!UBERON:0003323;2.49e-07;1!UBERON:0010258;2.49e-07;1!UBERON:0005253;2.49e-07;1!UBERON:0007842;2.49e-07;1!UBERON:0002397;2.49e-07;1!UBERON:0003113;2.49e-07;1!UBERON:0003277;2.49e-07;1!UBERON:0001709;2.49e-07;1!UBERON:0002244;2.49e-07;1!UBERON:0005620;2.49e-07;1!UBERON:0010364;2.49e-07;1!UBERON:0004288;2.49e-07;1!UBERON:0001136;7.34e-07;1!UBERON:0001343;7.34e-07;1!UBERON:0004910;7.34e-07;1!UBERON:0004813;7.34e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0005969,3.92e-12,2;UBERON:0003956,3.92e-12,2;UBERON:0001758,7.20e-09,6;UBERON:0003672,7.20e-09,6;UBERON:0010323,2.19e-08,11;UBERON:0001621,3.02e-08,3;UBERON:0002049,4.81e-08,78;UBERON:0007798,4.81e-08,78;UBERON:0003129,1.15e-07,7;UBERON:0005705,2.50e-07,1;UBERON:0008193,2.50e-07,1;UBERON:0010912,2.50e-07,1;UBERON:0002514,2.50e-07,1;UBERON:0003457,2.50e-07,1;UBERON:0008907,2.50e-07,1;UBERON:0008001,2.50e-07,1;UBERON:0007213,2.50e-07,1;UBERON:0009891,2.50e-07,1;UBERON:0007914,2.50e-07,1;UBERON:0009292,2.50e-07,1;UBERON:0003099,2.50e-07,1;UBERON:0007375,2.50e-07,1;UBERON:0003323,2.50e-07,1;UBERON:0010258,2.50e-07,1;UBERON:0007842,2.50e-07,1;UBERON:0009494,2.50e-07,1;UBERON:0010042,2.50e-07,1;UBERON:0010045,2.50e-07,1;UBERON:0010259,2.50e-07,1;UBERON:0010359,2.50e-07,1;UBERON:0009526,2.50e-07,1;UBERON:0002397,2.50e-07,1;UBERON:0003113,2.50e-07,1;UBERON:0003277,2.50e-07,1;UBERON:0001709,2.50e-07,1;UBERON:0004066,2.50e-07,1;UBERON:0002244,2.50e-07,1;UBERON:0005620,2.50e-07,1;UBERON:0004362,2.50e-07,1;UBERON:0010364,2.50e-07,1;UBERON:0010046,2.50e-07,1;UBERON:0005868,2.50e-07,1;UBERON:0007238,2.50e-07,1;UBERON:0004288,2.50e-07,1;UBERON:0004068,2.50e-07,1;UBERON:0010334,2.50e-07,1;UBERON:0003852,2.50e-07,1;UBERON:0010253,2.50e-07,1;UBERON:0004535,3.26e-07,109;UBERON:0001136,4.78e-07,1;UBERON:0001343,4.78e-07,1;UBERON:0004910,4.78e-07,1;UBERON:0005154,4.78e-07,1;UBERON:0005295,4.78e-07,1;UBERON:0004813,4.78e-07,1;UBERON:0005297,4.78e-07,1;UBERON:0005294,4.78e-07,1;UBERON:0010141,4.78e-07,1;UBERON:0005891,4.78e-07,1;UBERON:0001009,6.01e-07,112 | |||
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|short_description=p@chr1:68851155..68851158,+ | |||
}} | }} |
Latest revision as of 10:08, 28 July 2015
Short description: | p@chr1:68851155..68851158, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:68851155..68851158, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast of lymphatic vessel | 1.41e-12 | 2 |
trabecular meshwork cell | 3.92e-12 | 2 |
hepatic stem cell | 1.66e-11 | 2 |
hepatic mesenchymal stem cell | 1.66e-11 | 2 |
fibroblast of periodontium | 7.20e-09 | 6 |
smooth muscle cell of the coronary artery | 3.02e-08 | 3 |
vascular associated smooth muscle cell | 8.55e-08 | 32 |
smooth muscle cell | 2.77e-07 | 43 |
smooth muscle myoblast | 2.77e-07 | 43 |
androgen binding protein secreting cell | 4.78e-07 | 1 |
seminiferous tubule epithelial cell | 4.78e-07 | 1 |
Sertoli cell | 4.78e-07 | 1 |
fibroblast of the conjuctiva | 6.76e-07 | 1 |
fibroblast | 9.13e-07 | 76 |