FFCP PHASE1:Hg19::chr20:1875378..1875448,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:1875378..1875448,+ to FFCP PHASE1:Hg19::chr20:1875378..1875448,+: NSchange) |
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(11 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=140885 | |EntrezGene=140885 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9662 | |HGNC=9662 | ||
|TSSclassifier=strong | |||
|UniProt=P78324,B2R6C3 | |UniProt=P78324,B2R6C3 | ||
|association_with_transcript=0bp_to_ENST00000356025,NM_080792,uc002wfr.2_5end | |||
|cluster_id=chr20:1875378..1875448,+ | |||
|description=CAGE_peak_6_at_SIRPA_5end | |||
|id=chr20:1875378..1875448,+ | |||
|ontology_enrichment_celltype=CL:0000766!7.62e-12!76;CL:0000557!1.81e-09!71;CL:0000839!3.59e-09!70;CL:0002194!4.42e-09!63;CL:0000576!4.42e-09!63;CL:0000040!4.42e-09!63;CL:0000559!4.42e-09!63;CL:0002009!1.83e-08!65;CL:0002057!4.96e-08!42 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.01e-10;39!CL:0000234;6.01e-10;39!CL:0000860;8.25e-09;33!CL:0002057;8.25e-09;33 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.32e-15,72;CL:0000557,1.51e-12,67;CL:0000839,7.20e-12,66;CL:0002194,8.67e-12,59;CL:0000576,8.67e-12,59;CL:0000040,8.67e-12,59;CL:0000559,8.67e-12,59;CL:0000473,2.67e-11,48;CL:0000234,2.67e-11,48;CL:0002009,3.58e-11,61;CL:0000860,1.20e-08,42;CL:0002057,1.20e-08,42 | |||
|ontology_enrichment_development_v019=CL:0002057;8.33e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!6.13e-17!115;UBERON:0001049!2.70e-15!57;UBERON:0005068!2.70e-15!57;UBERON:0006241!2.70e-15!57;UBERON:0007135!2.70e-15!57;UBERON:0000467!7.64e-13!625;UBERON:0003080!8.74e-13!42;UBERON:0000480!1.51e-12!626;UBERON:0002780!2.27e-12!41;UBERON:0001890!2.27e-12!41;UBERON:0006240!2.27e-12!41;UBERON:0002616!3.50e-12!59;UBERON:0000468!4.11e-12!659;UBERON:0001893!1.14e-11!34;UBERON:0001869!1.24e-11!32;UBERON:0002020!4.45e-11!34;UBERON:0003528!4.45e-11!34;UBERON:0002791!4.56e-11!33;UBERON:0000955!7.59e-11!69;UBERON:0006238!7.59e-11!69;UBERON:0003075!7.86e-11!86;UBERON:0007284!7.86e-11!86;UBERON:0002346!1.04e-10!90;UBERON:0000062!3.51e-10!511;UBERON:0002619!5.20e-10!22;UBERON:0003056!3.08e-09!61;UBERON:0000923!4.96e-09!604;UBERON:0005291!4.96e-09!604;UBERON:0006598!4.96e-09!604;UBERON:0002532!4.96e-09!604;UBERON:0001950!5.16e-09!20;UBERON:0002050!6.35e-09!605;UBERON:0005423!6.35e-09!605;UBERON:0002371!9.21e-09!80;UBERON:0002193!1.63e-08!112;UBERON:0002390!1.74e-08!102;UBERON:0003061!1.74e-08!102;UBERON:0000922!2.03e-08!612;UBERON:0000956!2.47e-08!25;UBERON:0000203!2.47e-08!25;UBERON:0001017!3.17e-08!82;UBERON:0005743!7.94e-08!86;UBERON:0000479!1.67e-07!787;UBERON:0000025!3.39e-07!194;UBERON:0001474!5.84e-07!86;UBERON:0002405!6.59e-07!115;UBERON:0004111!8.35e-07!241 | |||
|ontology_enrichment_uberon_v019=UBERON:0002619;3.46e-11;22!UBERON:0001869;4.31e-11;32!UBERON:0001893;9.45e-11;34!UBERON:0001950;4.49e-10;20!UBERON:0003528;6.05e-10;34!UBERON:0002020;6.05e-10;34!UBERON:0002791;6.10e-10;32!UBERON:0002780;1.91e-09;41!UBERON:0001890;1.91e-09;41!UBERON:0000956;1.20e-08;25!UBERON:0000203;1.20e-08;25!UBERON:0000073;1.86e-08;53!UBERON:0002616;1.86e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,1.71e-15,56;UBERON:0005068,1.71e-15,56;UBERON:0006241,1.71e-15,56;UBERON:0007135,1.71e-15,56;UBERON:0000073,5.26e-15,53;UBERON:0002616,5.26e-15,53;UBERON:0007023,2.27e-14,114;UBERON:0002780,5.50e-13,41;UBERON:0001890,5.50e-13,41;UBERON:0003080,5.50e-13,41;UBERON:0006240,5.50e-13,41;UBERON:0001869,3.20e-12,32;UBERON:0001893,7.03e-12,34;UBERON:0002371,2.14e-11,76;UBERON:0003528,3.02e-11,34;UBERON:0002020,3.02e-11,34;UBERON:0002619,4.45e-11,22;UBERON:0002791,8.74e-11,32;UBERON:0000955,1.18e-10,68;UBERON:0006238,1.18e-10,68;UBERON:0002346,1.91e-10,86;UBERON:0003075,2.19e-10,82;UBERON:0007284,2.19e-10,82;UBERON:0002390,2.71e-10,98;UBERON:0003061,2.71e-10,98;UBERON:0001950,5.86e-10,20;UBERON:0002193,9.46e-10,108;UBERON:0010371,1.65e-09,104;UBERON:0003056,2.66e-09,61;UBERON:0001474,5.13e-09,82;UBERON:0002405,6.02e-09,93;UBERON:0001017,1.27e-08,81;UBERON:0000956,1.43e-08,25;UBERON:0000203,1.43e-08,25;UBERON:0004765,1.55e-07,90;UBERON:0001434,2.55e-07,100;UBERON:0005423,3.69e-07,581;UBERON:0000923,4.83e-07,560;UBERON:0010316,4.83e-07,560;UBERON:0005291,4.83e-07,560;UBERON:0006598,4.83e-07,560;UBERON:0010317,4.83e-07,560;UBERON:0002532,4.83e-07,560;UBERON:0002050,6.95e-07,564;UBERON:0001016,8.40e-07,89 | |||
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| ||
|short_description=p6@SIRPA | |||
}} | }} |
Latest revision as of 07:43, 20 September 2015
Short description: | p6@SIRPA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_SIRPA_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000356025, NM_080792, uc002wfr.2_5end |
EntrezGene: | SIRPA |
HGNC: | 9662 |
UniProt: | P78324B2R6C3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.32e-15 | 72 |
granulocyte monocyte progenitor cell | 1.51e-12 | 67 |
myeloid lineage restricted progenitor cell | 7.20e-12 | 66 |
monopoietic cell | 8.67e-12 | 59 |
monocyte | 8.67e-12 | 59 |
monoblast | 8.67e-12 | 59 |
promonocyte | 8.67e-12 | 59 |
defensive cell | 2.67e-11 | 48 |
phagocyte | 2.67e-11 | 48 |
macrophage dendritic cell progenitor | 3.58e-11 | 61 |
classical monocyte | 1.20e-08 | 42 |
CD14-positive, CD16-negative classical monocyte | 1.20e-08 | 42 |