FFCP PHASE1:Hg19::chr20:32150316..32150339,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr20:32150316..32150339,+ to FFCP PHASE1:Hg19::chr20:32150316..32150339,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=9139 | |EntrezGene=9139 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1536 | |HGNC=1536 | ||
|TSSclassifier=strong | |||
|UniProt=A2A2D9 | |UniProt=A2A2D9 | ||
|association_with_transcript=-32bp_to_ENST00000454955_5end | |||
|cluster_id=chr20:32150316..32150339,+ | |||
|coexpression_cluster_id=C4024 | |||
|description=CAGE_peak_4_at_CBFA2T2_5end | |||
|id=chr20:32150316..32150339,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019=CL:0000047;2.74e-11;2!CL:0000333;2.97e-10;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,1.41e-10,8 | |||
|ontology_enrichment_development_v019=UBERON:0005425;6.58e-07;1 | |||
|ontology_enrichment_disease=DOID:171!9.16e-07!10 | |||
|ontology_enrichment_disease_v019=DOID:4362;3.16e-10;5!DOID:171;1.27e-08;10!DOID:169;1.29e-08;6 | |||
|ontology_enrichment_disease_v019_2=DOID:4362,2.35e-10,5;DOID:171,1.16e-08,10;DOID:169,1.24e-08,6 | |||
|ontology_enrichment_uberon=UBERON:0000073!9.01e-38!94;UBERON:0001016!9.01e-38!94;UBERON:0001017!1.08e-35!82;UBERON:0001049!1.44e-35!57;UBERON:0005068!1.44e-35!57;UBERON:0006241!1.44e-35!57;UBERON:0007135!1.44e-35!57;UBERON:0005743!5.61e-35!86;UBERON:0007023!4.35e-33!115;UBERON:0002616!1.01e-29!59;UBERON:0002780!3.03e-29!41;UBERON:0001890!3.03e-29!41;UBERON:0006240!3.03e-29!41;UBERON:0001893!1.22e-28!34;UBERON:0000955!1.67e-28!69;UBERON:0006238!1.67e-28!69;UBERON:0002020!1.68e-28!34;UBERON:0003528!1.68e-28!34;UBERON:0003080!2.39e-28!42;UBERON:0002791!3.53e-27!33;UBERON:0001869!1.85e-25!32;UBERON:0002346!6.42e-25!90;UBERON:0002619!5.85e-24!22;UBERON:0003075!1.60e-23!86;UBERON:0007284!1.60e-23!86;UBERON:0001950!6.34e-21!20;UBERON:0000956!1.57e-20!25;UBERON:0000203!1.57e-20!25;UBERON:0000924!1.56e-19!173;UBERON:0006601!1.56e-19!173;UBERON:0004121!2.59e-18!169;UBERON:0003056!3.28e-18!61;UBERON:0000153!4.75e-16!129;UBERON:0007811!4.75e-16!129;UBERON:0000033!1.31e-14!123;UBERON:0002298!7.18e-11!8;UBERON:0002308!2.02e-09!9;UBERON:0000125!2.02e-09!9;UBERON:0001872!3.79e-09!5;UBERON:0003076!2.25e-08!15;UBERON:0003057!2.25e-08!15;UBERON:0004732!6.77e-08!13;UBERON:0001871!1.18e-07!7;UBERON:0000200!5.25e-07!6;UBERON:0000064!6.50e-07!219;UBERON:0002420!6.85e-07!9;UBERON:0007245!6.85e-07!9;UBERON:0010009!6.85e-07!9;UBERON:0010011!6.85e-07!9;UBERON:0000454!6.85e-07!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;1.40e-13;6!UBERON:0001016;2.86e-12;83!UBERON:0005162;7.30e-12;2!UBERON:0000122;7.30e-12;2!UBERON:0001897;5.22e-11;2!UBERON:0010225;5.22e-11;2!UBERON:0000013;2.97e-10;5!UBERON:0002410;2.97e-10;5!UBERON:0000073;5.55e-10;53!UBERON:0002616;5.55e-10;53!UBERON:0000010;8.08e-10;8!UBERON:0001017;1.10e-09;75!UBERON:0004732;1.15e-09;13!UBERON:0000002;1.36e-08;6!UBERON:0001560;1.36e-08;6!UBERON:0002780;3.86e-08;41!UBERON:0001890;3.86e-08;41!UBERON:0000988;1.27e-07;3!UBERON:0001896;1.27e-07;3!UBERON:0005290;1.27e-07;3!UBERON:0000941;6.58e-07;1!UBERON:0001785;6.58e-07;1!UBERON:0002464;6.58e-07;1!UBERON:0004904;6.58e-07;1!UBERON:0001021;6.58e-07;1!UBERON:0004733;7.59e-07;12!UBERON:0002028;7.59e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001016,1.86e-29,89;UBERON:0001017,2.34e-22,81;UBERON:0001049,7.81e-17,56;UBERON:0005068,7.81e-17,56;UBERON:0006241,7.81e-17,56;UBERON:0007135,7.81e-17,56;UBERON:0004121,9.00e-16,171;UBERON:0000924,9.00e-16,171;UBERON:0006601,9.00e-16,171;UBERON:0000073,1.92e-15,53;UBERON:0002616,1.92e-15,53;UBERON:0000955,5.13e-15,68;UBERON:0006238,5.13e-15,68;UBERON:0002298,1.61e-13,6;UBERON:0002346,3.17e-13,86;UBERON:0003075,2.79e-12,82;UBERON:0007284,2.79e-12,82;UBERON:0005162,6.76e-12,2;UBERON:0000122,6.76e-12,2;UBERON:0011216,7.12e-12,223;UBERON:0001897,2.28e-11,2;UBERON:0010225,2.28e-11,2;UBERON:0010371,2.11e-10,104;UBERON:0002780,2.19e-10,41;UBERON:0001890,2.19e-10,41;UBERON:0003080,2.19e-10,41;UBERON:0006240,2.19e-10,41;UBERON:0000013,2.84e-10,5;UBERON:0002410,2.84e-10,5;UBERON:0000010,7.65e-10,8;UBERON:0004732,1.22e-09,13;UBERON:0000002,1.06e-08,6;UBERON:0001560,1.06e-08,6;UBERON:0003076,3.08e-08,15;UBERON:0003057,3.08e-08,15;UBERON:0001893,3.59e-08,34;UBERON:0003528,3.82e-08,34;UBERON:0002020,3.82e-08,34;UBERON:0003056,5.77e-08,61;UBERON:0000988,1.01e-07,3;UBERON:0001896,1.85e-07,3;UBERON:0005290,1.85e-07,3;UBERON:0010096,1.85e-07,3;UBERON:0000941,6.23e-07,1;UBERON:0001785,6.23e-07,1;UBERON:0002464,6.23e-07,1;UBERON:0004904,6.23e-07,1;UBERON:0001021,6.23e-07,1;UBERON:0003902,6.23e-07,1;UBERON:0005425,6.23e-07,1;UBERON:0004733,8.10e-07,12;UBERON:0002028,8.10e-07,12;UBERON:0007277,8.10e-07,12 | |||
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| ||
|short_description=p4@CBFA2T2 | |||
}} | }} |
Latest revision as of 05:33, 25 September 2015
Short description: | p4@CBFA2T2 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CBFA2T2_5end |
Coexpression cluster: | C4024_small_argyrophil_merkel_gastrointestinal_cervical_neuroblastoma_smallcell |
Association with transcript: | -32bp_to_ENST00000454955_5end |
EntrezGene: | CBFA2T2 |
HGNC: | 1536 |
UniProt: | A2A2D9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
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neuronal stem cell | 1.41e-10 | 8 |
Ontology term | p-value | n |
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cervical cancer | 2.35e-10 | 5 |
neuroectodermal tumor | 1.16e-08 | 10 |
neuroendocrine tumor | 1.24e-08 | 6 |