FFCP PHASE1:Hg19::chr22:31626561..31626578,-: Difference between revisions
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-403bp_to_ENST00000365149_5end | |||
|cluster_id=chr22:31626561..31626578,- | |||
|coexpression_cluster_id=C344 | |||
|description=CAGE_peak_4_at_ENST00000365149_5end | |||
|id=chr22:31626561..31626578,- | |||
|ontology_enrichment_celltype=CL:0002057!2.05e-70!42;CL:0000860!3.13e-65!45;CL:0000766!4.21e-61!76;CL:0002009!1.85e-48!65;CL:0002194!6.68e-47!63;CL:0000576!6.68e-47!63;CL:0000040!6.68e-47!63;CL:0000559!6.68e-47!63;CL:0000557!8.87e-44!71;CL:0000839!1.55e-41!70;CL:0000738!1.57e-41!140;CL:0000763!3.83e-41!112;CL:0000049!3.83e-41!112;CL:0000037!7.38e-34!172;CL:0000566!7.38e-34!172;CL:0000988!1.79e-31!182;CL:0002087!7.93e-31!119;CL:0002032!3.45e-30!165;CL:0000837!3.45e-30!165;CL:0002031!2.70e-27!124;CL:0000094!9.34e-25!8;CL:0000081!1.04e-17!11;CL:0000775!3.05e-13!3;CL:0000134!5.76e-13!358;CL:0002320!1.59e-12!365;CL:0000219!5.67e-11!390;CL:0002393!1.61e-10!9;CL:0002397!1.61e-10!9;CL:0000771!1.53e-09!2;CL:0000034!3.08e-09!444;CL:0000048!4.05e-09!430;CL:0000723!7.43e-09!436 | |||
|ontology_enrichment_celltype_v019=CL:0000094;6.19e-49;8!CL:0000081;2.02e-35;11!CL:0000775;3.57e-25;3!CL:0000860;6.96e-25;33!CL:0002057;6.96e-25;33!CL:0000576;2.07e-21;48!CL:0000766;5.76e-20;69!CL:0000771;1.03e-17;2!CL:0000473;5.72e-17;39!CL:0000234;5.72e-17;39!CL:0002393;1.21e-12;6!CL:0002397;1.21e-12;6!CL:0000767;1.77e-11;3!CL:0000763;2.12e-11;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000094,3.63e-49,8;CL:0000766,3.83e-45,72;CL:0000081,1.37e-35,11;CL:0000860,7.53e-35,42;CL:0002057,7.53e-35,42;CL:0000473,3.44e-30,48;CL:0000234,3.44e-30,48;CL:0000763,4.24e-29,108;CL:0000049,4.24e-29,108;CL:0000775,3.03e-25,3;CL:0000738,7.70e-25,136;CL:0002194,1.16e-23,59;CL:0000576,1.16e-23,59;CL:0000040,1.16e-23,59;CL:0000559,1.16e-23,59;CL:0002009,8.09e-23,61;CL:0000839,6.24e-21,66;CL:0000557,1.38e-20,67;CL:0000037,1.89e-19,168;CL:0002032,2.01e-18,161;CL:0000837,2.01e-18,161;CL:0000988,2.79e-18,177;CL:0000771,9.85e-18,2;CL:0002087,8.33e-13,115;CL:0000767,1.36e-11,3;CL:0002031,1.79e-10,120;CL:0002393,1.38e-08,9;CL:0002397,1.38e-08,9;CL:0000134,2.87e-07,354;CL:0002320,4.72e-07,361 | |||
|ontology_enrichment_development_v019=CL:0002057;1.77e-23;42!CL:0000049;2.09e-07;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!2.25e-50!102;UBERON:0003061!2.25e-50!102;UBERON:0002193!4.21e-45!112;UBERON:0002371!9.11e-41!80;UBERON:0001474!2.06e-37!86;UBERON:0004765!9.38e-31!101;UBERON:0001434!9.38e-31!101;UBERON:0002405!4.84e-28!115;UBERON:0003081!4.45e-19!216;UBERON:0002204!1.23e-15!167;UBERON:0000178!8.22e-15!15;UBERON:0000179!8.22e-15!15;UBERON:0000463!8.22e-15!15;UBERON:0002384!6.34e-12!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.37e-20,98;UBERON:0003061,3.37e-20,98;UBERON:0002193,4.56e-18,108;UBERON:0002371,6.86e-18,76;UBERON:0001474,2.04e-16,82;UBERON:0004765,9.40e-15,90;UBERON:0002405,3.34e-14,93;UBERON:0001434,4.81e-13,100;UBERON:0003081,3.19e-08,203;UBERON:0002204,7.60e-07,167;UBERON:0002384,9.33e-07,371 | |||
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| ||
|short_description=p4@ENST00000365149 | |||
}} | }} |
Latest revision as of 20:17, 28 July 2015
Short description: | p4@ENST00000365149 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_ENST00000365149_5end |
Coexpression cluster: | C344_Neutrophils_CD14_Eosinophils_Whole_blood_CD14CD16_gall |
Association with transcript: | -403bp_to_ENST00000365149_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
granulocyte | 3.63e-49 | 8 |
myeloid leukocyte | 3.83e-45 | 72 |
blood cell | 1.37e-35 | 11 |
classical monocyte | 7.53e-35 | 42 |
CD14-positive, CD16-negative classical monocyte | 7.53e-35 | 42 |
defensive cell | 3.44e-30 | 48 |
phagocyte | 3.44e-30 | 48 |
myeloid cell | 4.24e-29 | 108 |
common myeloid progenitor | 4.24e-29 | 108 |
neutrophil | 3.03e-25 | 3 |
leukocyte | 7.70e-25 | 136 |
monopoietic cell | 1.16e-23 | 59 |
monocyte | 1.16e-23 | 59 |
monoblast | 1.16e-23 | 59 |
promonocyte | 1.16e-23 | 59 |
macrophage dendritic cell progenitor | 8.09e-23 | 61 |
myeloid lineage restricted progenitor cell | 6.24e-21 | 66 |
granulocyte monocyte progenitor cell | 1.38e-20 | 67 |
hematopoietic stem cell | 1.89e-19 | 168 |
hematopoietic oligopotent progenitor cell | 2.01e-18 | 161 |
hematopoietic multipotent progenitor cell | 2.01e-18 | 161 |
hematopoietic cell | 2.79e-18 | 177 |
eosinophil | 9.85e-18 | 2 |
nongranular leukocyte | 8.33e-13 | 115 |
basophil | 1.36e-11 | 3 |
hematopoietic lineage restricted progenitor cell | 1.79e-10 | 120 |
intermediate monocyte | 1.38e-08 | 9 |
CD14-positive, CD16-positive monocyte | 1.38e-08 | 9 |
mesenchymal cell | 2.87e-07 | 354 |
connective tissue cell | 4.72e-07 | 361 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.37e-20 | 98 |
blood island | 3.37e-20 | 98 |
hemolymphoid system | 4.56e-18 | 108 |
bone marrow | 6.86e-18 | 76 |
bone element | 2.04e-16 | 82 |
skeletal element | 9.40e-15 | 90 |
immune system | 3.34e-14 | 93 |
skeletal system | 4.81e-13 | 100 |
lateral plate mesoderm | 3.19e-08 | 203 |
musculoskeletal system | 7.60e-07 | 167 |
connective tissue | 9.33e-07 | 371 |