FFCP PHASE1:Hg19::chr22:39151975..39151994,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr22:39151975..39151994,- to FFCP PHASE1:Hg19::chr22:39151975..39151994,-: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25777 | |EntrezGene=25777 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14210 | |HGNC=14210 | ||
|TSSclassifier=strong | |||
|UniProt=B0QY62 | |UniProt=B0QY62 | ||
|association_with_transcript=9bp_to_ENST00000405018_5end | |||
|cluster_id=chr22:39151975..39151994,- | |||
|description=CAGE_peak_2_at_SUN2_5end | |||
|id=chr22:39151975..39151994,- | |||
|ontology_enrichment_celltype=CL:0002087!2.55e-14!119;CL:0000738!6.63e-14!140;CL:0000791!2.36e-12!18;CL:0000789!2.36e-12!18;CL:0002420!2.36e-12!18;CL:0002419!2.36e-12!18;CL:0000790!2.36e-12!18;CL:0002031!2.26e-11!124;CL:0000037!7.01e-11!172;CL:0000566!7.01e-11!172;CL:0000988!3.77e-10!182;CL:0002032!9.92e-10!165;CL:0000837!9.92e-10!165;CL:0000084!1.20e-09!25;CL:0000827!1.20e-09!25;CL:0002057!2.02e-09!42;CL:0000625!1.87e-08!11;CL:0000766!6.27e-08!76;CL:0000838!1.02e-07!52;CL:0000542!2.38e-07!53;CL:0000051!2.38e-07!53;CL:0000860!3.44e-07!45 | |||
|ontology_enrichment_celltype_v019=CL:0000791;2.34e-12;18!CL:0000789;2.34e-12;18!CL:0002419;2.34e-12;18!CL:0000084;1.09e-09;25!CL:0000625;1.85e-08;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0002087,4.01e-16,115;CL:0000738,1.65e-15,136;CL:0002031,6.97e-13,120;CL:0000791,2.36e-12,18;CL:0000789,2.36e-12,18;CL:0002420,2.36e-12,18;CL:0002419,2.36e-12,18;CL:0000790,2.36e-12,18;CL:0000037,4.25e-12,168;CL:0000988,2.91e-11,177;CL:0002032,6.87e-11,161;CL:0000837,6.87e-11,161;CL:0000473,2.86e-10,48;CL:0000234,2.86e-10,48;CL:0000084,1.20e-09,25;CL:0000827,1.20e-09,25;CL:0000766,1.56e-09,72;CL:0000860,2.02e-09,42;CL:0002057,2.02e-09,42;CL:0000625,1.87e-08,11;CL:0002194,2.63e-08,59;CL:0000576,2.63e-08,59;CL:0000040,2.63e-08,59;CL:0000559,2.63e-08,59;CL:0002009,4.58e-08,61;CL:0000838,1.02e-07,52;CL:0000542,2.38e-07,53;CL:0000051,2.38e-07,53;CL:0000557,4.34e-07,67 | |||
|ontology_enrichment_development_v019=CL:0000790;2.34e-12;18!CL:0002057;3.65e-07;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!1.20e-32!115;UBERON:0001049!4.87e-16!57;UBERON:0005068!4.87e-16!57;UBERON:0006241!4.87e-16!57;UBERON:0007135!4.87e-16!57;UBERON:0002020!2.82e-12!34;UBERON:0003528!2.82e-12!34;UBERON:0001893!3.65e-12!34;UBERON:0003080!5.50e-12!42;UBERON:0002616!5.75e-12!59;UBERON:0002791!8.78e-12!33;UBERON:0002780!1.76e-11!41;UBERON:0001890!1.76e-11!41;UBERON:0006240!1.76e-11!41;UBERON:0001869!5.71e-11!32;UBERON:0000955!2.49e-10!69;UBERON:0006238!2.49e-10!69;UBERON:0003075!2.11e-09!86;UBERON:0007284!2.11e-09!86;UBERON:0002390!2.17e-09!102;UBERON:0003061!2.17e-09!102;UBERON:0001017!2.43e-09!82;UBERON:0002193!6.76e-09!112;UBERON:0002619!8.05e-09!22;UBERON:0002346!1.35e-08!90;UBERON:0000956!2.59e-08!25;UBERON:0000203!2.59e-08!25;UBERON:0005743!3.96e-08!86;UBERON:0001950!6.07e-08!20;UBERON:0003081!1.32e-07!216 | |||
|ontology_enrichment_uberon_v019=UBERON:0003528;2.02e-10;34!UBERON:0002020;2.02e-10;34!UBERON:0001893;2.17e-10;34!UBERON:0002791;4.63e-10;32!UBERON:0001869;6.20e-10;32!UBERON:0002619;7.86e-09;22!UBERON:0002780;8.70e-09;41!UBERON:0001890;8.70e-09;41!UBERON:0000073;1.09e-08;53!UBERON:0002616;1.09e-08;53!UBERON:0007023;1.19e-08;114!UBERON:0000956;2.53e-08;25!UBERON:0000203;2.53e-08;25!UBERON:0001950;5.92e-08;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.88e-32,114;UBERON:0001049,1.60e-15,56;UBERON:0005068,1.60e-15,56;UBERON:0006241,1.60e-15,56;UBERON:0007135,1.60e-15,56;UBERON:0000073,1.51e-14,53;UBERON:0002616,1.51e-14,53;UBERON:0003528,2.82e-12,34;UBERON:0002020,2.82e-12,34;UBERON:0001893,3.65e-12,34;UBERON:0002780,1.76e-11,41;UBERON:0001890,1.76e-11,41;UBERON:0003080,1.76e-11,41;UBERON:0006240,1.76e-11,41;UBERON:0002791,3.40e-11,32;UBERON:0001869,5.71e-11,32;UBERON:0002390,6.92e-11,98;UBERON:0003061,6.92e-11,98;UBERON:0002193,2.92e-10,108;UBERON:0003075,6.03e-10,82;UBERON:0007284,6.03e-10,82;UBERON:0000955,6.53e-10,68;UBERON:0006238,6.53e-10,68;UBERON:0002346,4.50e-09,86;UBERON:0001017,5.84e-09,81;UBERON:0003081,7.56e-09,203;UBERON:0002619,8.05e-09,22;UBERON:0000956,2.59e-08,25;UBERON:0000203,2.59e-08,25;UBERON:0001950,6.07e-08,20;UBERON:0002405,2.49e-07,93;UBERON:0001016,5.60e-07,89 | |||
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151616 | ||
|short_description=p2@SUN2 | |||
}} | }} |
Latest revision as of 16:47, 24 September 2015
Short description: | p2@SUN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SUN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 9bp_to_ENST00000405018_5end |
EntrezGene: | SUN2 |
HGNC: | 14210 |
UniProt: | B0QY62 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
nongranular leukocyte | 4.01e-16 | 115 |
leukocyte | 1.65e-15 | 136 |
hematopoietic lineage restricted progenitor cell | 6.97e-13 | 120 |
mature alpha-beta T cell | 2.36e-12 | 18 |
alpha-beta T cell | 2.36e-12 | 18 |
immature T cell | 2.36e-12 | 18 |
mature T cell | 2.36e-12 | 18 |
immature alpha-beta T cell | 2.36e-12 | 18 |
hematopoietic stem cell | 4.25e-12 | 168 |
hematopoietic cell | 2.91e-11 | 177 |
hematopoietic oligopotent progenitor cell | 6.87e-11 | 161 |
hematopoietic multipotent progenitor cell | 6.87e-11 | 161 |
defensive cell | 2.86e-10 | 48 |
phagocyte | 2.86e-10 | 48 |
T cell | 1.20e-09 | 25 |
pro-T cell | 1.20e-09 | 25 |
myeloid leukocyte | 1.56e-09 | 72 |
classical monocyte | 2.02e-09 | 42 |
CD14-positive, CD16-negative classical monocyte | 2.02e-09 | 42 |
CD8-positive, alpha-beta T cell | 1.87e-08 | 11 |
monopoietic cell | 2.63e-08 | 59 |
monocyte | 2.63e-08 | 59 |
monoblast | 2.63e-08 | 59 |
promonocyte | 2.63e-08 | 59 |
macrophage dendritic cell progenitor | 4.58e-08 | 61 |
lymphoid lineage restricted progenitor cell | 1.02e-07 | 52 |
lymphocyte | 2.38e-07 | 53 |
common lymphoid progenitor | 2.38e-07 | 53 |
granulocyte monocyte progenitor cell | 4.34e-07 | 67 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.88e-32 | 114 |
neural tube | 1.60e-15 | 56 |
neural rod | 1.60e-15 | 56 |
future spinal cord | 1.60e-15 | 56 |
neural keel | 1.60e-15 | 56 |
regional part of nervous system | 1.51e-14 | 53 |
regional part of brain | 1.51e-14 | 53 |
brain grey matter | 2.82e-12 | 34 |
gray matter | 2.82e-12 | 34 |
telencephalon | 3.65e-12 | 34 |
regional part of forebrain | 1.76e-11 | 41 |
forebrain | 1.76e-11 | 41 |
anterior neural tube | 1.76e-11 | 41 |
future forebrain | 1.76e-11 | 41 |
regional part of telencephalon | 3.40e-11 | 32 |
cerebral hemisphere | 5.71e-11 | 32 |
hematopoietic system | 6.92e-11 | 98 |
blood island | 6.92e-11 | 98 |
hemolymphoid system | 2.92e-10 | 108 |
neural plate | 6.03e-10 | 82 |
presumptive neural plate | 6.03e-10 | 82 |
brain | 6.53e-10 | 68 |
future brain | 6.53e-10 | 68 |
neurectoderm | 4.50e-09 | 86 |
central nervous system | 5.84e-09 | 81 |
lateral plate mesoderm | 7.56e-09 | 203 |
regional part of cerebral cortex | 8.05e-09 | 22 |
cerebral cortex | 2.59e-08 | 25 |
pallium | 2.59e-08 | 25 |
neocortex | 6.07e-08 | 20 |
immune system | 2.49e-07 | 93 |
nervous system | 5.60e-07 | 89 |