FFCP PHASE1:Hg19::chr2:33701658..33701673,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr2:33701658..33701673,+ to FFCP PHASE1:Hg19::chr2:33701658..33701673,+: NSchange) |
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(10 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=25780 | |EntrezGene=25780 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=14545 | |HGNC=14545 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000482857_5end | |||
|cluster_id=chr2:33701658..33701673,+ | |||
|coexpression_cluster_id=C2698 | |||
|description=CAGE_peak_2_at_RASGRP3_5end | |||
|id=chr2:33701658..33701673,+ | |||
|ontology_enrichment_celltype=CL:0000738!1.80e-28!140;CL:0002031!1.69e-25!124;CL:0002087!8.83e-25!119;CL:0000037!6.81e-23!172;CL:0000566!6.81e-23!172;CL:0002032!1.42e-22!165;CL:0000837!1.42e-22!165;CL:0000988!1.02e-21!182;CL:0000766!1.61e-17!76;CL:0002009!2.91e-17!65;CL:0000839!1.16e-16!70;CL:0000557!2.78e-16!71;CL:0002194!4.53e-16!63;CL:0000576!4.53e-16!63;CL:0000040!4.53e-16!63;CL:0000559!4.53e-16!63;CL:0002057!1.19e-14!42;CL:0000763!4.71e-14!112;CL:0000049!4.71e-14!112;CL:0000945!2.07e-13!24;CL:0000826!2.07e-13!24;CL:0000860!2.04e-12!45;CL:0000236!1.44e-08!14;CL:0000542!1.95e-08!53;CL:0000051!1.95e-08!53;CL:0000838!3.53e-08!52;CL:0000990!6.30e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0000473;1.12e-19;39!CL:0000234;1.12e-19;39!CL:0000860;1.60e-18;33!CL:0002057;1.60e-18;33!CL:0000945;2.29e-18;24!CL:0000576;9.39e-12;48!CL:0000236;3.12e-11;13!CL:0000766;1.37e-09;69!CL:0002087;1.05e-08;104!CL:0000738;1.58e-08;136!CL:0000990;3.78e-08;8!CL:0000235;5.65e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,5.52e-33,136;CL:0002087,1.70e-29,115;CL:0002031,2.62e-29,120;CL:0002032,3.37e-26,161;CL:0000837,3.37e-26,161;CL:0000037,5.08e-26,168;CL:0000988,9.11e-26,177;CL:0002009,5.57e-25,61;CL:0000766,2.39e-23,72;CL:0002194,3.27e-23,59;CL:0000576,3.27e-23,59;CL:0000040,3.27e-23,59;CL:0000559,3.27e-23,59;CL:0000473,8.56e-23,48;CL:0000234,8.56e-23,48;CL:0000839,1.33e-22,66;CL:0000557,2.39e-22,67;CL:0000763,6.29e-19,108;CL:0000049,6.29e-19,108;CL:0000945,2.37e-18,24;CL:0000826,2.37e-18,24;CL:0000860,8.34e-18,42;CL:0002057,8.34e-18,42;CL:0000236,3.79e-12,14;CL:0000990,3.87e-08,8;CL:0000542,3.65e-07,53;CL:0000051,3.65e-07,53;CL:0000235,5.61e-07,6;CL:0000838,7.54e-07,52 | |||
|ontology_enrichment_development_v019=CL:0002057;2.01e-13;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.04e-26!115;UBERON:0002193!1.28e-21!112;UBERON:0002390!6.40e-21!102;UBERON:0003061!6.40e-21!102;UBERON:0002371!1.71e-13!80;UBERON:0002405!5.34e-13!115;UBERON:0001474!8.10e-12!86;UBERON:0001049!6.08e-11!57;UBERON:0005068!6.08e-11!57;UBERON:0006241!6.08e-11!57;UBERON:0007135!6.08e-11!57;UBERON:0004765!4.12e-09!101;UBERON:0001434!4.12e-09!101;UBERON:0003080!1.22e-08!42;UBERON:0002780!1.57e-08!41;UBERON:0001890!1.57e-08!41;UBERON:0006240!1.57e-08!41;UBERON:0000178!5.32e-08!15;UBERON:0000179!5.32e-08!15;UBERON:0000463!5.32e-08!15;UBERON:0002616!7.03e-08!59;UBERON:0005743!7.21e-08!86;UBERON:0001893!7.30e-08!34;UBERON:0002020!7.42e-08!34;UBERON:0003528!7.42e-08!34;UBERON:0002791!1.88e-07!33;UBERON:0003075!4.69e-07!86;UBERON:0007284!4.69e-07!86;UBERON:0001017!5.28e-07!82;UBERON:0000955!6.68e-07!69;UBERON:0006238!6.68e-07!69;UBERON:0001869!7.50e-07!32 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;6.39e-11;15!UBERON:0000179;6.39e-11;15!UBERON:0000463;6.39e-11;15!UBERON:0001893;8.47e-10;34!UBERON:0003528;1.67e-09;34!UBERON:0002020;1.67e-09;34!UBERON:0002780;2.39e-09;41!UBERON:0001890;2.39e-09;41!UBERON:0002791;4.80e-09;32!UBERON:0001869;5.67e-09;32!UBERON:0000073;2.29e-08;53!UBERON:0002616;2.29e-08;53!UBERON:0002619;5.65e-08;22!UBERON:0007023;1.72e-07;114!UBERON:0000125;2.90e-07;9!UBERON:0002308;2.90e-07;9!UBERON:0001950;5.56e-07;20 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002193,6.24e-31,108;UBERON:0002390,8.13e-30,98;UBERON:0003061,8.13e-30,98;UBERON:0007023,2.20e-23,114;UBERON:0002405,4.57e-22,93;UBERON:0002371,1.05e-18,76;UBERON:0001474,5.71e-17,82;UBERON:0001049,3.18e-16,56;UBERON:0005068,3.18e-16,56;UBERON:0006241,3.18e-16,56;UBERON:0007135,3.18e-16,56;UBERON:0000073,3.55e-14,53;UBERON:0002616,3.55e-14,53;UBERON:0004765,5.82e-14,90;UBERON:0002780,2.37e-12,41;UBERON:0001890,2.37e-12,41;UBERON:0003080,2.37e-12,41;UBERON:0006240,2.37e-12,41;UBERON:0003075,2.44e-12,82;UBERON:0007284,2.44e-12,82;UBERON:0001434,4.79e-12,100;UBERON:0001893,1.63e-11,34;UBERON:0003528,1.67e-11,34;UBERON:0002020,1.67e-11,34;UBERON:0002346,4.22e-11,86;UBERON:0000178,7.26e-11,15;UBERON:0000179,7.26e-11,15;UBERON:0000463,7.26e-11,15;UBERON:0002791,3.98e-10,32;UBERON:0001869,5.16e-10,32;UBERON:0000955,1.11e-09,68;UBERON:0006238,1.11e-09,68;UBERON:0010371,8.52e-09,104;UBERON:0003056,1.13e-08,61;UBERON:0001017,1.91e-08,81;UBERON:0002619,4.87e-08,22;UBERON:0003081,9.12e-08,203;UBERON:0000125,2.42e-07,9;UBERON:0002308,2.42e-07,9;UBERON:0001016,3.73e-07,89;UBERON:0001950,4.81e-07,20 | |||
|phase1_expression=0,0,0,1.0007329835313,0,0,0,0,0,0.245733936501509,0,0,0,0,0,0,0,0,0,0,0,0,0,0.136874425072884,0.125542639594803,2.59805579543034,3.44822475689772,4.171671409625,13.3743854128627,2.68680578668049,1.08371286321253,0,0,0,21.3034801595829,27.7230003350472,0.880801318004542,16.6198622559563,13.6370224279696,9.98250005292918,4.92614043327834,6.15397965436061,4.12120908214698,2.32637182047304,4.53451132426571,2.66842467306598,2.78914844286822,8.63452564845834,9.60089749774821,1.43846196161075,6.91633907628572,9.93225365532058,14.479318590938,20.0100251910986,33.8566216485854,5.27078550719293,10.643339852256,10.3372802844739,25.7110469591558,27.5998963285441,31.327519164153,1.31940520074686,4.78712778291916,2.98357325372886,6.96502172708602,7.37600792098482,5.60540024096017,4.52247597462138,11.9941071236646,12.3797641481916,3.63239701580021,9.94349617166425,15.1901945971625,0,0.637812899895131,0,0.22465726229299,0,0.48217676009124,0.285012743741249,0.19891667719909,0.365328307529268,19.3595868907455,20.2071286166989,21.3482220927253,17.4959391252268,10.8106916499723,22.9900975981793,18.5092564379761,20.0351288452426,17.6456020423929,10.5702694086769,8.02773779062981,0,8.96813700770458,1.31692042387539,0.983548850569165,1.17903228824749,0.411202997999018,0,0,0.473447805734733,0,0.334231370655521,0.589211814949674,0.221533894583621,0.812411591295047,0.128091319725675,0.520237390239513,0.328875809207352,0.552700035571697,0.869409257205157,0.444859689486181,0,0,0.339928028092699,0,0,0.253019692019503,0.637130828648193,0,0.950452044448374,0.451725357233318,0,0,0,0.821127996921047,0.604820229674197,0.267440195783507,0.144824403882799,0,0,0,0,0,0,0,0.486634870302636,0.0945348171640679,0,0.087834785693126,1.63723844372141,0,0,31.805644578159,33.6070392987586,28.3200455905183,0.715471872916026,0.571994910780128,0,0,0,0,0,0,0.275118041940067,0.208994966536811,2.32575083252396,3.5576626268671,3.01248551488203,0,0.760272105718513,0.732186172644509,1.10298924103761,0,0.267899184852239,0.44905874525234,0.225222960966644,0,0,0.183201743930407,6.58902087180316,3.87780264148325,0,0,0,0,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0,0.469737994575059,0,0.280901613404497,1.02077085627447,0.491337269247072,0.516628905878827,0,0,0,0,0.841680569770331,0.250237039743928,1.10825646193673,0,0,0,0.113432183160021,0,1.2813443329114,0.211931901159562,0,0,1.03056216018252,0.930584281657949,0,0,0,0.920498986422993,1.13152239773168,0,0,0.169560592310488,0,0,0,0,0,0.116193942869518,0.10366105501537,0,0,1.56449532329816,1.92972281457866,0,0,0,0,0,0,0.220587945464788,0.217879444092406,0,0.134831308160164,0.196221465125346,0,0,0,0,0,0,0.982827216677626,1.18157981336281,0,0.860919069801795,0,0,0,0,0,0,0,0,0,0.117408694235822,0.721832238805369,0,2.66355813128438,0,0,7.87894419479671,21.0603838625314,9.21513206190115,0,0,0,0,0,0,4.43396914106349,0,0.207328115540772,0.432359860250884,0.50496973370552,3.80987365753014,0.763976851116555,3.51652341630141,1.71072446022705,1.64523988325318,1.50171528921959,4.28739648945867,0,0,0,0.517086863031111,0,0,2.12750493267896,2.08014873822732,0,0,0,0.285955987316295,0,0,0,0.355391948742546,0,0,0,0,10.9461402577071,18.0812552915566,16.8667151586425,0.479249710983165,0,0,0,0,0,1.34502172792233,0.985153801009636,0.862510299438069,0.513372145118994,0.508189248444927,0,0,0,0.637938751653163,0,2.99161459204025,0.828831026872071,0,0,0,1.03985430765404,3.39015078714607,1.10391690523754,1.28855556491985,0,0,0,0,0,1.04260337361699,0,0,2.27444828735176,2.5885704098234,2.02782359826544,0,0,0,0,0.153461973288062,0,0.256278298511402,0,0,0,0.616838775210622,0.177561725313127,0.574890092096664,0,0.116210378459959,0.604297247958111,0,0,0.114814448164607,0.546273504020151,0,0,0.15403067420883,0,0,0.105551628892876,0,0,0.215915916102139,1.54227252690289,0,0,0,0,0,7.23557592931584,4.96727356947311,3.59030175162945,0.656029291399411,1.95227036798582,1.64865618636356,0,0.082509499920588,0,0,0,0,0,0,0,0,0,0.426133137080504,0,0,0,0,0.2023155617111,0.464845549297286,0.62962469366128,0,0.308033580176089,0.532306030317022,0,0,0,0,0.632758849437452,0,0,0,0,0,0,0,0,0,0,0,0,4.87426979262569,0,0.136499911407986,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0,0,0.92947049429925,0,0.143411352204052,0,0.35667105148125,0.709522128141196,0.422215270595328,0,0.379473173765715,0,0,0,0,0.564862804660675,0,0,0.443430153536676,0,6.5968189200182,3.0585488285695,5.69647187174163,5.47933083552915,6.58179636937911,5.18778648954174,4.86028293514303,4.75875105776562,0.106824071127473,0,0,2.22963810150862,0,0,0,0,14.3629027599275,0.846694330895531,0,0.842391534340376,0,0,0,2.20079311142084,0,0.201799707191048,0,0.343505344755765,0,0,0.166849141711909,0,0,0,8.92503738970744,0,0,0,3.07667176470977,0,0.111443384277478,9.37649284461163,0,0,0,0,2.39138007897872,0.222617410045812,0,0,0.996239941255349,6.90709788827869,0,0,48.6184981571224,2.17727711363265,0.539210106883961,0.179021174675609,0,0.295930216910801,4.7896618469388,0,3.87733098438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| 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| ||
|short_description=p2@RASGRP3 | |||
}} | }} |
Latest revision as of 23:59, 16 September 2015
Short description: | p2@RASGRP3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_RASGRP3_5end |
Coexpression cluster: | C2698_CD19_b_lymphoma_Burkitt_Dendritic_immature_Monocytederived |
Association with transcript: | 0bp_to_ENST00000482857_5end |
EntrezGene: | RASGRP3 |
HGNC: | 14545 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
leukocyte | 5.52e-33 | 136 |
nongranular leukocyte | 1.70e-29 | 115 |
hematopoietic lineage restricted progenitor cell | 2.62e-29 | 120 |
hematopoietic oligopotent progenitor cell | 3.37e-26 | 161 |
hematopoietic multipotent progenitor cell | 3.37e-26 | 161 |
hematopoietic stem cell | 5.08e-26 | 168 |
hematopoietic cell | 9.11e-26 | 177 |
macrophage dendritic cell progenitor | 5.57e-25 | 61 |
myeloid leukocyte | 2.39e-23 | 72 |
monopoietic cell | 3.27e-23 | 59 |
monocyte | 3.27e-23 | 59 |
monoblast | 3.27e-23 | 59 |
promonocyte | 3.27e-23 | 59 |
defensive cell | 8.56e-23 | 48 |
phagocyte | 8.56e-23 | 48 |
myeloid lineage restricted progenitor cell | 1.33e-22 | 66 |
granulocyte monocyte progenitor cell | 2.39e-22 | 67 |
myeloid cell | 6.29e-19 | 108 |
common myeloid progenitor | 6.29e-19 | 108 |
lymphocyte of B lineage | 2.37e-18 | 24 |
pro-B cell | 2.37e-18 | 24 |
classical monocyte | 8.34e-18 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.34e-18 | 42 |
B cell | 3.79e-12 | 14 |
conventional dendritic cell | 3.87e-08 | 8 |
lymphocyte | 3.65e-07 | 53 |
common lymphoid progenitor | 3.65e-07 | 53 |
macrophage | 5.61e-07 | 6 |
lymphoid lineage restricted progenitor cell | 7.54e-07 | 52 |