FFCP PHASE1:Hg19::chr4:154125648..154125659,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:154125648..154125659,+ to FFCP PHASE1:Hg19::chr4:154125648..154125659,+: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=23321 | |EntrezGene=23321 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=15974 | |HGNC=15974 | ||
|TSSclassifier=strong | |||
|UniProt=Q9C040 | |UniProt=Q9C040 | ||
|association_with_transcript=30bp_to_ENST00000338700_5end | |||
|cluster_id=chr4:154125648..154125659,+ | |||
|coexpression_cluster_id=C4 | |||
|description=CAGE_peak_4_at_TRIM2_5end | |||
|id=chr4:154125648..154125659,+ | |||
|ontology_enrichment_celltype= | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006601;2.70e-20;82!UBERON:0006241;2.72e-12;3!UBERON:0003057;2.72e-12;3!UBERON:0010122;3.63e-08;2 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:3493;7.51e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,1.11e-07,2 | |||
|ontology_enrichment_uberon=UBERON:0001049!3.12e-55!57;UBERON:0005068!3.12e-55!57;UBERON:0006241!3.12e-55!57;UBERON:0007135!3.12e-55!57;UBERON:0001017!9.73e-48!82;UBERON:0002616!3.51e-45!59;UBERON:0005743!1.32e-44!86;UBERON:0000955!4.14e-43!69;UBERON:0006238!4.14e-43!69;UBERON:0002780!3.27e-42!41;UBERON:0001890!3.27e-42!41;UBERON:0006240!3.27e-42!41;UBERON:0000073!6.41e-42!94;UBERON:0001016!6.41e-42!94;UBERON:0003080!6.67e-41!42;UBERON:0007023!5.82e-40!115;UBERON:0003075!1.58e-39!86;UBERON:0007284!1.58e-39!86;UBERON:0001893!1.22e-38!34;UBERON:0002020!1.46e-38!34;UBERON:0003528!1.46e-38!34;UBERON:0002346!2.52e-38!90;UBERON:0002791!3.45e-37!33;UBERON:0001869!1.23e-35!32;UBERON:0003056!4.21e-30!61;UBERON:0000033!2.54e-26!123;UBERON:0000956!6.21e-26!25;UBERON:0000203!6.21e-26!25;UBERON:0004121!2.85e-25!169;UBERON:0000153!3.49e-25!129;UBERON:0007811!3.49e-25!129;UBERON:0000924!4.97e-25!173;UBERON:0006601!4.97e-25!173;UBERON:0002619!3.60e-23!22;UBERON:0001950!1.62e-20!20;UBERON:0000025!2.09e-16!194;UBERON:0003076!6.48e-15!15;UBERON:0003057!6.48e-15!15;UBERON:0002308!3.00e-14!9;UBERON:0000125!3.00e-14!9;UBERON:0000483!4.05e-14!309;UBERON:0004111!4.41e-14!241;UBERON:0002420!6.99e-14!9;UBERON:0007245!6.99e-14!9;UBERON:0010009!6.99e-14!9;UBERON:0010011!6.99e-14!9;UBERON:0000454!6.99e-14!9;UBERON:0000475!8.39e-14!365;UBERON:0000119!9.55e-14!312;UBERON:0000064!2.61e-12!219;UBERON:0004732!2.72e-12!13;UBERON:0000062!3.34e-12!511;UBERON:0000477!3.64e-12!286;UBERON:0000481!6.93e-12!347;UBERON:0009663!2.14e-11!7;UBERON:0004733!6.59e-11!12;UBERON:0002028!6.59e-11!12;UBERON:0007277!6.59e-11!12;UBERON:0002298!5.12e-10!8;UBERON:0000200!1.40e-09!6;UBERON:0001871!3.98e-09!7;UBERON:0000349!2.78e-08!5;UBERON:0001872!4.01e-08!5;UBERON:0000922!4.79e-08!612;UBERON:0000923!1.02e-07!604;UBERON:0005291!1.02e-07!604;UBERON:0006598!1.02e-07!604;UBERON:0002532!1.02e-07!604;UBERON:0002050!1.19e-07!605;UBERON:0005423!1.19e-07!605;UBERON:0000467!1.37e-07!625;UBERON:0000480!1.59e-07!626;UBERON:0002680!4.94e-07!9;UBERON:0001895!4.94e-07!9;UBERON:0010092!4.94e-07!9;UBERON:0000468!5.32e-07!659;UBERON:0000369!6.60e-07!4;UBERON:0002435!6.60e-07!4;UBERON:0000204!6.60e-07!4;UBERON:0010082!6.60e-07!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0001893;1.72e-56;34!UBERON:0003528;8.53e-55;34!UBERON:0002020;8.53e-55;34!UBERON:0002791;5.63e-52;32!UBERON:0001869;6.87e-52;32!UBERON:0002780;6.39e-48;41!UBERON:0001890;6.39e-48;41!UBERON:0000073;1.90e-44;53!UBERON:0002616;1.90e-44;53!UBERON:0002619;1.02e-37;22!UBERON:0000956;3.77e-37;25!UBERON:0000203;3.77e-37;25!UBERON:0000125;1.89e-33;9!UBERON:0002308;1.89e-33;9!UBERON:0001950;1.31e-31;20!UBERON:0001017;2.52e-29;75!UBERON:0000955;2.57e-28;68!UBERON:0009663;2.83e-26;7!UBERON:0002420;3.28e-26;9!UBERON:0007245;3.28e-26;9!UBERON:0010009;3.28e-26;9!UBERON:0010011;3.28e-26;9!UBERON:0000454;3.28e-26;9!UBERON:0001016;2.38e-23;83!UBERON:0002298;2.90e-23;6!UBERON:0000200;1.71e-15;6!UBERON:0000369;4.61e-15;4!UBERON:0002435;4.61e-15;4!UBERON:0000204;4.61e-15;4!UBERON:0007023;7.38e-15;114!UBERON:0011216;4.55e-14;132!UBERON:0004732;4.94e-14;13!UBERON:0000988;1.13e-12;3!UBERON:0000349;1.91e-12;5!UBERON:0001872;2.25e-12;5!UBERON:0001896;2.43e-12;3!UBERON:0005290;2.43e-12;3!UBERON:0002240;2.72e-12;3!UBERON:0005174;2.72e-12;3!UBERON:0001137;2.72e-12;3!UBERON:0005383;1.95e-11;3!UBERON:0005382;1.95e-11;3!UBERON:0004733;2.81e-11;12!UBERON:0002028;2.81e-11;12!UBERON:0001875;2.72e-09;2!UBERON:0006514;2.72e-09;2!UBERON:0005162;2.88e-09;2!UBERON:0000122;2.88e-09;2!UBERON:0001897;4.99e-09;2!UBERON:0010225;4.99e-09;2!UBERON:0002148;6.81e-09;2!UBERON:0006331;6.81e-09;2!UBERON:0009662;6.81e-09;2!UBERON:0001871;1.16e-08;6!UBERON:0001954;1.67e-08;2!UBERON:0003022;1.67e-08;2!UBERON:0002421;1.67e-08;2!UBERON:0002600;1.67e-08;2!UBERON:0002771;2.56e-08;2!UBERON:0001873;3.63e-08;2!UBERON:0001829;7.51e-08;2!UBERON:0010314;2.67e-07;132!UBERON:0002021;3.22e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,2.42e-88,56;UBERON:0005068,2.42e-88,56;UBERON:0006241,2.42e-88,56;UBERON:0007135,2.42e-88,56;UBERON:0000073,1.64e-78,53;UBERON:0002616,1.64e-78,53;UBERON:0001017,1.66e-71,81;UBERON:0000955,9.53e-70,68;UBERON:0006238,9.53e-70,68;UBERON:0002780,5.88e-69,41;UBERON:0001890,5.88e-69,41;UBERON:0003080,5.88e-69,41;UBERON:0006240,5.88e-69,41;UBERON:0001016,4.14e-67,89;UBERON:0001893,1.82e-66,34;UBERON:0003528,2.68e-66,34;UBERON:0002020,2.68e-66,34;UBERON:0003075,2.53e-61,82;UBERON:0007284,2.53e-61,82;UBERON:0002791,1.64e-59,32;UBERON:0001869,1.93e-59,32;UBERON:0002346,4.52e-58,86;UBERON:0007023,1.63e-49,114;UBERON:0010371,3.76e-49,104;UBERON:0003056,7.71e-48,61;UBERON:0004121,5.65e-38,171;UBERON:0000924,5.65e-38,171;UBERON:0006601,5.65e-38,171;UBERON:0002619,9.58e-38,22;UBERON:0000956,3.57e-37,25;UBERON:0000203,3.57e-37,25;UBERON:0010314,8.22e-37,132;UBERON:0000125,2.21e-33,9;UBERON:0002308,2.21e-33,9;UBERON:0001950,1.24e-31,20;UBERON:0011216,4.14e-31,223;UBERON:0009663,3.36e-26,7;UBERON:0002420,4.22e-26,9;UBERON:0007245,4.22e-26,9;UBERON:0010009,4.22e-26,9;UBERON:0010011,4.22e-26,9;UBERON:0000454,4.22e-26,9;UBERON:0002298,2.80e-23,6;UBERON:0003076,1.29e-19,15;UBERON:0003057,1.29e-19,15;UBERON:0000025,1.34e-19,192;UBERON:0004111,5.13e-17,240;UBERON:0000200,1.39e-15,6;UBERON:0000369,5.87e-15,4;UBERON:0002435,5.87e-15,4;UBERON:0000204,5.87e-15,4;UBERON:0010082,5.87e-15,4;UBERON:0004732,4.80e-14,13;UBERON:0000988,1.15e-12,3;UBERON:0001872,2.15e-12,5;UBERON:0000349,2.15e-12,5;UBERON:0001896,2.30e-12,3;UBERON:0005290,2.30e-12,3;UBERON:0010096,2.30e-12,3;UBERON:0002240,2.48e-12,3;UBERON:0005174,2.48e-12,3;UBERON:0001137,2.48e-12,3;UBERON:0005383,2.39e-11,3;UBERON:0005382,2.39e-11,3;UBERON:0004733,2.77e-11,12;UBERON:0002028,2.77e-11,12;UBERON:0007277,2.77e-11,12;UBERON:0000483,1.34e-10,306;UBERON:0000119,2.08e-10,309;UBERON:0001875,2.61e-09,2;UBERON:0006514,2.61e-09,2;UBERON:0005162,2.83e-09,2;UBERON:0000122,2.83e-09,2;UBERON:0001897,5.30e-09,2;UBERON:0010225,5.30e-09,2;UBERON:0002148,6.68e-09,2;UBERON:0006331,6.68e-09,2;UBERON:0009662,6.68e-09,2;UBERON:0001871,1.06e-08,6;UBERON:0001954,1.67e-08,2;UBERON:0003022,1.67e-08,2;UBERON:0002421,1.67e-08,2;UBERON:0002600,1.67e-08,2;UBERON:0002771,2.17e-08,2;UBERON:0001873,4.06e-08,2;UBERON:0010122,4.06e-08,2;UBERON:0001829,7.25e-08,2;UBERON:0000923,3.40e-07,560;UBERON:0010316,3.40e-07,560;UBERON:0005291,3.40e-07,560;UBERON:0006598,3.40e-07,560;UBERON:0010317,3.40e-07,560;UBERON:0002532,3.40e-07,560;UBERON:0002021,3.78e-07,5;UBERON:0002050,4.59e-07,564 | |||
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| ||
|short_description=p4@TRIM2 | |||
}} | }} |
Latest revision as of 04:06, 16 September 2015
Short description: | p4@TRIM2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM2_5end |
Coexpression cluster: | C4_optic_corpus_substantia_medulla_spinal_thalamus_globus |
Association with transcript: | 30bp_to_ENST00000338700_5end |
EntrezGene: | TRIM2 |
HGNC: | 15974 |
UniProt: | Q9C040 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 1.11e-07 | 2 |