FFCP PHASE1:Hg19::chr4:185747114..185747128,-: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:185747114..185747128,- to FFCP PHASE1:Hg19::chr4:185747114..185747128,-: NSchange) |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=2180 | |EntrezGene=2180 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3569 | |HGNC=3569 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPM6 | |UniProt=E7EPM6 | ||
|association_with_transcript=59bp_to_ENST00000507295_5end | |||
|cluster_id=chr4:185747114..185747128,- | |||
|coexpression_cluster_id=C2 | |||
|description=CAGE_peak_1_at_ACSL1_5end | |||
|id=chr4:185747114..185747128,- | |||
|ontology_enrichment_celltype=CL:0000766!1.11e-24!76;CL:0002057!1.99e-24!42;CL:0000738!4.85e-24!140;CL:0000557!1.32e-20!71;CL:0000860!3.07e-20!45;CL:0002009!3.51e-20!65;CL:0002194!8.74e-20!63;CL:0000576!8.74e-20!63;CL:0000040!8.74e-20!63;CL:0000559!8.74e-20!63;CL:0000839!3.30e-19!70;CL:0002087!9.00e-19!119;CL:0002031!4.46e-18!124;CL:0000037!9.11e-15!172;CL:0000566!9.11e-15!172;CL:0000988!2.70e-14!182;CL:0002032!2.18e-13!165;CL:0000837!2.18e-13!165;CL:0000763!2.10e-12!112;CL:0000049!2.10e-12!112;CL:0002320!1.11e-08!365;CL:0000134!4.11e-08!358;CL:0000136!6.49e-07!15 | |||
|ontology_enrichment_celltype_v019=CL:0000860;1.70e-19;33!CL:0002057;1.70e-19;33!CL:0000473;2.98e-18;39!CL:0000234;2.98e-18;39!CL:0000576;1.45e-15;48!CL:0000766;5.37e-13;69!CL:0000136;3.45e-08;13!CL:0002087;9.59e-08;104 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,7.58e-30,72;CL:0000738,6.77e-28,136;CL:0000473,3.39e-27,48;CL:0000234,3.39e-27,48;CL:0000557,2.39e-25,67;CL:0002009,4.11e-25,61;CL:0000860,5.09e-25,42;CL:0002057,5.09e-25,42;CL:0002194,9.61e-25,59;CL:0000576,9.61e-25,59;CL:0000040,9.61e-25,59;CL:0000559,9.61e-25,59;CL:0000839,9.26e-24,66;CL:0002087,1.72e-22,115;CL:0002031,1.26e-21,120;CL:0000988,3.20e-17,177;CL:0000037,3.26e-17,168;CL:0002032,7.52e-16,161;CL:0000837,7.52e-16,161;CL:0000763,6.62e-15,108;CL:0000049,6.62e-15,108;CL:0002320,4.67e-09,361;CL:0000134,1.82e-08,354;CL:0000136,4.71e-07,15 | |||
|ontology_enrichment_development_v019=CL:0002057;2.32e-18;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.69e-26!115;UBERON:0002390!4.78e-26!102;UBERON:0003061!4.78e-26!102;UBERON:0002193!1.26e-22!112;UBERON:0002371!1.50e-17!80;UBERON:0001474!8.43e-17!86;UBERON:0002405!8.53e-17!115;UBERON:0004765!3.51e-12!101;UBERON:0001434!3.51e-12!101;UBERON:0000479!1.17e-11!787;UBERON:0003081!8.05e-11!216;UBERON:0002204!4.15e-09!167;UBERON:0000178!5.21e-09!15;UBERON:0000179!5.21e-09!15;UBERON:0000463!5.21e-09!15;UBERON:0002384!2.33e-07!375 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;2.98e-09;15!UBERON:0000179;2.98e-09;15!UBERON:0000463;2.98e-09;15!UBERON:0007023;3.08e-07;114 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,1.41e-30,98;UBERON:0003061,1.41e-30,98;UBERON:0007023,9.45e-27,114;UBERON:0002193,2.40e-26,108;UBERON:0002371,1.69e-21,76;UBERON:0001474,2.43e-20,82;UBERON:0004765,5.12e-19,90;UBERON:0002405,5.24e-19,93;UBERON:0001434,3.05e-15,100;UBERON:0000479,1.01e-14,773;UBERON:0003081,2.32e-13,203;UBERON:0002204,7.05e-11,167;UBERON:0000178,3.34e-09,15;UBERON:0000179,3.34e-09,15;UBERON:0000463,3.34e-09,15;UBERON:0000926,3.44e-09,315;UBERON:0004120,3.44e-09,315;UBERON:0006603,3.44e-09,315;UBERON:0002384,1.12e-07,371 | |||
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| ||
|short_description=p1@ACSL1 | |||
}} | }} |
Latest revision as of 02:05, 17 September 2015
Short description: | p1@ACSL1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ACSL1_5end |
Coexpression cluster: | C2_Eosinophils_Neutrophils_CD14_Whole_Basophils_Peripheral_Mast |
Association with transcript: | 59bp_to_ENST00000507295_5end |
EntrezGene: | ACSL1 |
HGNC: | 3569 |
UniProt: | E7EPM6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 7.58e-30 | 72 |
leukocyte | 6.77e-28 | 136 |
defensive cell | 3.39e-27 | 48 |
phagocyte | 3.39e-27 | 48 |
granulocyte monocyte progenitor cell | 2.39e-25 | 67 |
macrophage dendritic cell progenitor | 4.11e-25 | 61 |
classical monocyte | 5.09e-25 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.09e-25 | 42 |
monopoietic cell | 9.61e-25 | 59 |
monocyte | 9.61e-25 | 59 |
monoblast | 9.61e-25 | 59 |
promonocyte | 9.61e-25 | 59 |
myeloid lineage restricted progenitor cell | 9.26e-24 | 66 |
nongranular leukocyte | 1.72e-22 | 115 |
hematopoietic lineage restricted progenitor cell | 1.26e-21 | 120 |
hematopoietic cell | 3.20e-17 | 177 |
hematopoietic stem cell | 3.26e-17 | 168 |
hematopoietic oligopotent progenitor cell | 7.52e-16 | 161 |
hematopoietic multipotent progenitor cell | 7.52e-16 | 161 |
myeloid cell | 6.62e-15 | 108 |
common myeloid progenitor | 6.62e-15 | 108 |
connective tissue cell | 4.67e-09 | 361 |
mesenchymal cell | 1.82e-08 | 354 |
fat cell | 4.71e-07 | 15 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 1.41e-30 | 98 |
blood island | 1.41e-30 | 98 |
adult organism | 9.45e-27 | 114 |
hemolymphoid system | 2.40e-26 | 108 |
bone marrow | 1.69e-21 | 76 |
bone element | 2.43e-20 | 82 |
skeletal element | 5.12e-19 | 90 |
immune system | 5.24e-19 | 93 |
skeletal system | 3.05e-15 | 100 |
tissue | 1.01e-14 | 773 |
lateral plate mesoderm | 2.32e-13 | 203 |
musculoskeletal system | 7.05e-11 | 167 |
blood | 3.34e-09 | 15 |
haemolymphatic fluid | 3.34e-09 | 15 |
organism substance | 3.34e-09 | 15 |
mesoderm | 3.44e-09 | 315 |
mesoderm-derived structure | 3.44e-09 | 315 |
presumptive mesoderm | 3.44e-09 | 315 |
connective tissue | 1.12e-07 | 371 |