FFCP PHASE1:Hg19::chr4:87928328..87928351,+: Difference between revisions
From FANTOM5_SSTAR
m (moved FFCP PHASE1 hg19::chr4:87928328..87928351,+ to FFCP PHASE1:Hg19::chr4:87928328..87928351,+: NSchange) |
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(9 intermediate revisions by the same user not shown) | |||
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4299 | |EntrezGene=4299 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7135 | |HGNC=7135 | ||
|TSSclassifier=strong | |||
|UniProt=D6RAU0 | |UniProt=D6RAU0 | ||
|association_with_transcript=-43bp_to_ENST00000511722_5end | |||
|cluster_id=chr4:87928328..87928351,+ | |||
|description=CAGE_peak_6_at_AFF1_5end | |||
|id=chr4:87928328..87928351,+ | |||
|ontology_enrichment_celltype=CL:0000763!6.16e-19!112;CL:0000049!6.16e-19!112;CL:0000037!1.12e-18!172;CL:0000566!1.12e-18!172;CL:0000766!1.35e-18!76;CL:0002032!2.33e-18!165;CL:0000837!2.33e-18!165;CL:0000738!7.27e-18!140;CL:0000988!9.63e-17!182;CL:0000839!1.83e-16!70;CL:0000557!1.91e-16!71;CL:0002031!1.48e-15!124;CL:0002009!1.38e-13!65;CL:0002194!5.53e-13!63;CL:0000576!5.53e-13!63;CL:0000040!5.53e-13!63;CL:0000559!5.53e-13!63;CL:0002087!5.31e-12!119;CL:0002057!1.31e-11!42;CL:0000860!1.27e-09!45 | |||
|ontology_enrichment_celltype_v019=CL:0000473;6.26e-13;39!CL:0000234;6.26e-13;39!CL:0000860;7.32e-13;33!CL:0002057;7.32e-13;33!CL:0000576;3.71e-09;48!CL:0000766;6.79e-09;69 | |||
|ontology_enrichment_celltype_v019_2=CL:0000766,2.10e-21,72;CL:0000763,1.05e-20,108;CL:0000049,1.05e-20,108;CL:0000037,7.94e-20,168;CL:0000738,1.51e-19,136;CL:0002032,1.67e-19,161;CL:0000837,1.67e-19,161;CL:0000839,4.20e-19,66;CL:0000557,4.61e-19,67;CL:0000988,7.52e-18,177;CL:0002031,2.58e-17,120;CL:0002009,6.52e-16,61;CL:0002194,2.95e-15,59;CL:0000576,2.95e-15,59;CL:0000040,2.95e-15,59;CL:0000559,2.95e-15,59;CL:0000473,3.58e-14,48;CL:0000234,3.58e-14,48;CL:0002087,3.08e-13,115;CL:0000860,6.85e-12,42;CL:0002057,6.85e-12,42 | |||
|ontology_enrichment_development_v019=CL:0002057;5.87e-09;42 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!7.54e-40!115;UBERON:0002193!4.52e-18!112;UBERON:0002390!9.95e-18!102;UBERON:0003061!9.95e-18!102;UBERON:0002371!1.04e-13!80;UBERON:0002405!3.02e-13!115;UBERON:0001049!5.57e-13!57;UBERON:0005068!5.57e-13!57;UBERON:0006241!5.57e-13!57;UBERON:0007135!5.57e-13!57;UBERON:0001474!5.96e-12!86;UBERON:0002616!8.26e-12!59;UBERON:0003080!4.77e-11!42;UBERON:0002780!1.20e-10!41;UBERON:0001890!1.20e-10!41;UBERON:0006240!1.20e-10!41;UBERON:0000955!1.84e-09!69;UBERON:0006238!1.84e-09!69;UBERON:0002020!3.49e-09!34;UBERON:0003528!3.49e-09!34;UBERON:0001893!4.42e-09!34;UBERON:0002791!6.84e-09!33;UBERON:0004765!1.28e-08!101;UBERON:0001434!1.28e-08!101;UBERON:0001017!1.49e-08!82;UBERON:0001869!2.90e-08!32;UBERON:0002619!8.77e-08!22;UBERON:0005743!2.32e-07!86;UBERON:0001950!6.32e-07!20 | |||
|ontology_enrichment_uberon_v019=UBERON:0007023;3.46e-11;114!UBERON:0002619;6.38e-08;22!UBERON:0002780;9.32e-08;41!UBERON:0001890;9.32e-08;41!UBERON:0003528;1.17e-07;34!UBERON:0002020;1.17e-07;34!UBERON:0001893;1.58e-07;34!UBERON:0002791;2.24e-07;32!UBERON:0001869;3.16e-07;32!UBERON:0001950;4.88e-07;20!UBERON:0000073;5.91e-07;53!UBERON:0002616;5.91e-07;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.30e-41,114;UBERON:0002193,3.97e-20,108;UBERON:0002390,4.43e-20,98;UBERON:0003061,4.43e-20,98;UBERON:0002405,3.11e-17,93;UBERON:0002371,8.14e-16,76;UBERON:0001474,1.56e-13,82;UBERON:0001049,1.29e-12,56;UBERON:0005068,1.29e-12,56;UBERON:0006241,1.29e-12,56;UBERON:0007135,1.29e-12,56;UBERON:0000073,2.09e-11,53;UBERON:0002616,2.09e-11,53;UBERON:0004765,3.85e-11,90;UBERON:0002780,9.49e-11,41;UBERON:0001890,9.49e-11,41;UBERON:0003080,9.49e-11,41;UBERON:0006240,9.49e-11,41;UBERON:0001434,1.55e-09,100;UBERON:0003528,3.27e-09,34;UBERON:0002020,3.27e-09,34;UBERON:0001893,4.16e-09,34;UBERON:0000955,1.22e-08,68;UBERON:0006238,1.22e-08,68;UBERON:0002791,2.01e-08,32;UBERON:0001017,2.82e-08,81;UBERON:0001869,2.93e-08,32;UBERON:0002619,4.25e-08,22;UBERON:0001016,1.25e-07,89;UBERON:0003081,2.38e-07,203;UBERON:0001950,3.38e-07,20;UBERON:0002346,8.62e-07,86 | |||
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| ||
|short_description=p6@AFF1 | |||
}} | }} |
Latest revision as of 04:52, 19 September 2015
Short description: | p6@AFF1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_AFF1_5end |
Coexpression cluster: | NA |
Association with transcript: | -43bp_to_ENST00000511722_5end |
EntrezGene: | AFF1 |
HGNC: | 7135 |
UniProt: | D6RAU0 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
myeloid leukocyte | 2.10e-21 | 72 |
myeloid cell | 1.05e-20 | 108 |
common myeloid progenitor | 1.05e-20 | 108 |
hematopoietic stem cell | 7.94e-20 | 168 |
leukocyte | 1.51e-19 | 136 |
hematopoietic oligopotent progenitor cell | 1.67e-19 | 161 |
hematopoietic multipotent progenitor cell | 1.67e-19 | 161 |
myeloid lineage restricted progenitor cell | 4.20e-19 | 66 |
granulocyte monocyte progenitor cell | 4.61e-19 | 67 |
hematopoietic cell | 7.52e-18 | 177 |
hematopoietic lineage restricted progenitor cell | 2.58e-17 | 120 |
macrophage dendritic cell progenitor | 6.52e-16 | 61 |
monopoietic cell | 2.95e-15 | 59 |
monocyte | 2.95e-15 | 59 |
monoblast | 2.95e-15 | 59 |
promonocyte | 2.95e-15 | 59 |
defensive cell | 3.58e-14 | 48 |
phagocyte | 3.58e-14 | 48 |
nongranular leukocyte | 3.08e-13 | 115 |
classical monocyte | 6.85e-12 | 42 |
CD14-positive, CD16-negative classical monocyte | 6.85e-12 | 42 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.30e-41 | 114 |
hemolymphoid system | 3.97e-20 | 108 |
hematopoietic system | 4.43e-20 | 98 |
blood island | 4.43e-20 | 98 |
immune system | 3.11e-17 | 93 |
bone marrow | 8.14e-16 | 76 |
bone element | 1.56e-13 | 82 |
neural tube | 1.29e-12 | 56 |
neural rod | 1.29e-12 | 56 |
future spinal cord | 1.29e-12 | 56 |
neural keel | 1.29e-12 | 56 |
regional part of nervous system | 2.09e-11 | 53 |
regional part of brain | 2.09e-11 | 53 |
skeletal element | 3.85e-11 | 90 |
regional part of forebrain | 9.49e-11 | 41 |
forebrain | 9.49e-11 | 41 |
anterior neural tube | 9.49e-11 | 41 |
future forebrain | 9.49e-11 | 41 |
skeletal system | 1.55e-09 | 100 |
brain grey matter | 3.27e-09 | 34 |
gray matter | 3.27e-09 | 34 |
telencephalon | 4.16e-09 | 34 |
brain | 1.22e-08 | 68 |
future brain | 1.22e-08 | 68 |
regional part of telencephalon | 2.01e-08 | 32 |
central nervous system | 2.82e-08 | 81 |
cerebral hemisphere | 2.93e-08 | 32 |
regional part of cerebral cortex | 4.25e-08 | 22 |
nervous system | 1.25e-07 | 89 |
lateral plate mesoderm | 2.38e-07 | 203 |
neocortex | 3.38e-07 | 20 |
neurectoderm | 8.62e-07 | 86 |